Salmo trutta (river trout): 115204450
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Entry
115204450 CDS
T08542
Name
(RefSeq) calpain-1 catalytic subunit-like isoform X1
KO
K01367
calpain-1 [EC:
3.4.22.52
]
Organism
stru
Salmo trutta (river trout)
Pathway
stru04141
Protein processing in endoplasmic reticulum
stru04210
Apoptosis
stru04217
Necroptosis
stru04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
115204450
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
115204450
04217 Necroptosis
115204450
04218 Cellular senescence
115204450
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
stru01002
]
115204450
Enzymes [BR:
stru01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.52 calpain-1
115204450
Peptidases and inhibitors [BR:
stru01002
]
Cysteine peptidases
Family C2: calpain family
115204450
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_1
EF-hand_6
EF-hand_8
EF-hand_7
EF-hand_5
CAPN13-like_C_EFh
Ndufs5
Motif
Other DBs
NCBI-GeneID:
115204450
NCBI-ProteinID:
XP_029625892
Ensembl:
ENSSTUG00000007130
LinkDB
All DBs
Position
12:complement(83171383..83179054)
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AA seq
712 aa
AA seq
DB search
MEQVREQVIERVFASGVAARLRSQWDRNEGIGQNDKALKFLGQDFEYLQSHSLQSRRLFE
DDAFPAQISSLGFKELGSRSTKTQGVRWMRPTEFCSDPHFIVDGATRTDVCQGALGDCWL
LAAIASLTLNETLLHRVVPHGQSFHQQYAGIFHFQFWQFGEWVDVVIDDRLPVKDGKLLF
LHSAEGAEFWSALLEKAYAKLNGCYEALSGGSTSEGFEDFTGGVTEMFELKKAHPDLFSI
ISRAVERGSLLGCSIDISGVFEMEAMTFKKLVKGHAYSVTGVEEVEFKGSPTKLLRIRNP
WGEMEWTGAWSDNSREWAGVDPSVRARLYNRSEDGEFWMSFRDFLREFSRLEICNLTADA
LQASQVKKWSSALYPGEWRRGSTAGGCRNYPATFWLNPQFKVALQHPDTDGQSGCSFLVA
LMQKDRRRQRREGKDMETIGFTIYEVPEEFTGQAGVHLKRDFFLTHSSSARSELFINLRE
VSTRFCLPQGEYIVVPSTFEPQKDGDFVLRVFSEKPADSQELDDDITADLPEEVELDESQ
IDAGFKGLFRQLAGAEAEISASKLQTILNRIISKHKDLKTDGFGKEACRCMITLMDTTGT
GKLGLTEFHVLWEKIKRYLTVFRKFDLDKSGTMSSYEMRMALESSGFKLTNHLFQLIILR
YAKEDLNVDFDNFVNCLIRLETMFKTFKEMDTDVDGVVSFSFFQWISLTMFA
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atggagcaggtgagggagcaggttattgaacgtgtgtttgcctctggagtggctgctcgt
ttgaggagccagtgggaccgcaatgagggcatcggtcagaatgacaaggccctgaagttc
ttaggccaagactttgaatatctccagtcccacagtctgcagagcagacggctgtttgag
gatgatgcattccctgctcagatctcgtcgctgggcttcaaggagctggggtcacgctcg
acaaagacacagggggtccggtggatgcgccccacggagttctgctctgaccctcacttc
atcgtagacggagccacgcgcacagacgtctgccagggagctctgggtgactgttggctg
ctggcagcgattgcttcactcacactgaatgagactctactacatcgggtggtgccccat
gggcagagcttccaccaacagtatgctgggatctttcacttccagttctggcagtttggg
gagtgggtggatgtggtgattgatgacaggctgccagtgaaggatgggaagctgctgttt
ctccactcagcagagggggctgagttctggagcgccctgctggagaaggcctacgcaaag
ctcaatggctgttacgaggccctctcagggggcagtacatcggaggggtttgaggacttc
acagggggcgtgacagagatgtttgagctgaagaaggcccatccagacctgttcagcata
atcagtagagcagtggagcgaggttccctgctgggatgctccatagatatctctggtgtt
ttcgagatggaggcgatgacattcaagaagctggtgaaaggccatgcctactctgtgaca
ggtgtggaggaggtggagtttaaaggaagtcccaccaagctcctgcggatcaggaacccc
tggggagagatggagtggaccggagcctggagtgacaattcaagagagtgggctggagtt
gacccatcggtcagagctagattgtacaaccgtagtgaagatggcgagttctggatgtca
ttccgtgactttctgcgtgagttcagccgtttggagatctgtaatctgacagcagacgcc
ctgcaggccagccaagtgaagaagtggagctcagcgctctaccctggagagtggaggaga
ggcagcactgcagggggctgcaggaactacccagcaacgttctggctcaaccctcaattc
aaagtggcccttcagcacccagacacagatggccaatcaggttgcagcttcctagtggcg
ctgatgcagaaggatcgtcgtcggcaacggcgtgaggggaaagacatggagaccattgga
ttcaccatctatgaggttccagaagagtttacaggtcaggccggggtgcatctaaagagg
gacttcttcctgacccatagctccagtgcccggtcggagctcttcatcaacctgagagag
gtcagcacccgcttctgcctgccccagggagagtatatcgtcgtcccctccaccttcgag
ccccagaaggacggagactttgtgctcagggtgttctctgaaaagccagctgactcccag
gaattggatgatgacatcacagctgatctgcctgaggaggtagagctggacgagagccag
attgatgcaggcttcaagggtctcttcagacagctcgctggagcggaagcggagatcagt
gcctccaagcttcaaaccatcctaaacagaatcatcagcaagcataaggacctgaagaca
gacggctttgggaaggaggcgtgtcgttgcatgataactctcatggataccaccggcacc
gggaagctgggcttgacagagttccatgtgctgtgggagaagatcaaacggtacctgact
gtgtttaggaagtttgacctggataaatctggcaccatgagctcttatgaaatgcggatg
gcactggaatcatctggcttcaagttgaccaaccacttattccaactcatcatcctacgc
tacgccaaggaagacctgaacgtggactttgataactttgtcaactgtctcatccgtctg
gagaccatgttcaagacctttaaagaaatggacactgatgtagatggggtggtttccttc
agcttcttccagtggatctccctcaccatgtttgcctag
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