Salmo trutta (river trout): 115204508
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Entry
115204508 CDS
T08542
Name
(RefSeq) eukaryotic peptide chain release factor GTP-binding subunit ERF3A-like
KO
K03267
peptide chain release factor subunit 3
Organism
stru
Salmo trutta (river trout)
Pathway
stru03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
115204508
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stru03019
]
115204508
03012 Translation factors [BR:
stru03012
]
115204508
Messenger RNA biogenesis [BR:
stru03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
115204508
Translation factors [BR:
stru03012
]
Eukaryotic type
Release factors
115204508
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
PAM2
Motif
Other DBs
NCBI-GeneID:
115204508
NCBI-ProteinID:
XP_029626013
Ensembl:
ENSSTUG00000005949
UniProt:
A0A673XCM2
LinkDB
All DBs
Position
1:complement(62170656..62185723)
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AA seq
579 aa
AA seq
DB search
MDPRDAAPDSWEQEDDVEVPVDGKLDNEFAAINVNAKPFVPNINAVEFVPSFFQKGPSED
PDSGADIEPVVATMEVAETAAPVENGDSEMTTEETWDLKGVEPNEEEPGGGPGGDGGPIV
VEEILEEEVLEEEEDVPIMPKVVALPPDAPKKEHVNVVFIGHVDAGKSTIGGQIMYLTGM
VEKRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAP
GHKSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIILVN
KMDDPTVNWSLERYEECKEKLVPFLKKVGFNPKKDIHFMPCSGLTGANLKEPVESCTWYT
GLPFIPHLDSLPNLNRASDGPVRLPIVDKYKDMGTVILGKLESGSISKAQQLVMMPNRHT
VEVLSLLSDDVETDDASPGENLKLRLKGIEEEEILPGFILCNAENLCHSGRTFDAQIVII
EHKSIICPGYNAVLHIHTCIEEVQITALICLVDKKSGEKSKTRPRFVKQDQVCIARLRTA
GTICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVAERD
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atggacccgagagacgctgcccctgattcctgggaacaagaggatgatgttgaggtcccg
gtcgacgggaaactcgataacgaattcgccgccatcaacgtgaatgccaaaccgtttgtc
cccaacattaatgccgtcgaatttgtcccgtccttctttcagaaaggcccctcggaagat
cctgattccggtgcggacattgaaccagttgttgccaccatggaggttgcagaaactgca
gccccggtggagaacggcgactctgaaatgaccacagaggagacgtgggacctgaaaggg
gtggagcccaatgaggaagaaccaggaggagggcctggtggcgacgggggaccaatagtt
gttgaggagattctggaggaggaagtcctggaggaggaggaagatgtgccaatcatgcct
aaagtggtagccctcccaccagacgcgcccaagaaggaacatgtgaatgtggtgttcatc
ggtcatgttgatgctggcaagtctaccatcggaggacaaatcatgtatttaacgggcatg
gtggagaagagaactctggagaagtatgaaagagaagccaaggagaagaacagggaaacc
tggtacctctcctgggctctggacactaaccaggaggagcgagacaaggggaagactgtg
gaggtgggcagagcgtactttgaaactgagaaaaagcactttaccatcctggatgcacca
ggccacaaaagctttgtgcccaatatgatcggaggagcatcgcaagctgacctggctgtg
ctggtgatctcagccaggaagggagagtttgagacgggctttgagaagggtggacagaca
cgggagcatgccatgttggccaaaacggcgggggtgaagcatctgatcatcctcgtcaac
aaaatggacgaccccacagtgaactggagcctagagaggtacgaagaatgcaaggaaaaa
ctagtgccatttttgaagaaggttggcttcaaccccaagaaagacattcacttcatgccc
tgctccggcctcacaggagccaacctcaaggagcctgttgagtcgtgcacttggtatacg
gggttaccattcattccacatctggacagtttgccaaatttaaacagagcgagcgacgga
ccagtcagattacccattgtagacaaatacaaggacatgggtactgtcatcctggggaaa
ctggagtcagggtccatcagtaaagcacagcagcttgtcatgatgccaaacaggcacaca
gtggaggtgttgagcctgctgagtgatgacgtggagacagatgatgcttctcctggagag
aacctgaagctgagactgaagggcatcgaggaggaggagatcctgccaggcttcatcctc
tgtaacgctgagaacctctgccactctggacgcacctttgacgcccagattgtcatcatt
gaacacaagtccattatctgccctggttacaatgctgtcctccacatccacacctgcatt
gaagaagtgcaaattacggccttaatctgtctggtagacaagaagtcgggagagaaaagt
aagacgcgaccgcgctttgtgaaacaggaccaggtgtgcattgcccgtctgcgcaccgct
ggaaccatctgccttgaaaccttcaaagacttcccccagatgggacggttcaccctacgg
gatgaaggtaagaccattgccattggtaaggtgttgaagctcgttgctgagagggactga
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