Salmo trutta (river trout): 115204516
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Entry
115204516 CDS
T08542
Name
(RefSeq) macrophage colony-stimulating factor 1 receptor 1 isoform X1
KO
K05090
macrophage colony-stimulating factor 1 receptor [EC:
2.7.10.1
]
Organism
stru
Salmo trutta (river trout)
Pathway
stru04010
MAPK signaling pathway
stru04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
115204516
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
115204516
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
stru01001
]
115204516
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
stru04090
]
115204516
Enzymes [BR:
stru01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
115204516
Protein kinases [BR:
stru01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
115204516
CD molecules [BR:
stru04090
]
Proteins
115204516
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
Ig_2
VEGFR1-3_N_Ig-like
I-set
ig
Ig_VEGFR-1-like_5th
Ig_PDGFR_d4
Ig_5
C2-set_3
C2-set_2
Ig_4
Motif
Other DBs
NCBI-GeneID:
115204516
NCBI-ProteinID:
XP_029626024
LinkDB
All DBs
Position
12:84950186..84960738
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AA seq
972 aa
AA seq
DB search
MLSLALFLGIMLCTAQERSPPVIRLNSVLLREAERTLPLGTSFTLTCEGDSTATWSTTAF
KRRNTKQGSMITTRHLTADYTGTYKCVYDNQPDLFSEVHIYVKDPINILVTPRNMRDVKE
GGDLLLCQLTDPSATDLSLRMANGDPTPPDMNYTVSPRRGILIRNLLTSHSANYICSAKI
NGVTTRSKDITINVVQRLRWPPSVLIEVDGYVSIVGEELLIPCITSNPNHFYNVTWKHSS
LKALNFLQKVMQDKQVHITSTVTIPAVTMSDTGNFTCTAMNEAGANRSTTYLQVVDEPYI
RLIPRLSPNLYQNGSLVNVKEGENLEISILIEAYPQIKEHWWDVPMSHSHNISTHGDTWT
AQDNYRYESSLLLHRVRSEERGQYTLHTRSARLNSSITFNIQVYQKPSAMLRLKNSTTLI
CTSSGYPAPTILWYQCPGIQSTCDADNDTVEVQPLFTSTMEVQSELTLSPSTEEVTVECV
TFNFAGKNRDIFVSHVLATTSSTFVMSELFTPTLIGATSTAAFLFLLLVIVLYKYKQKPK
YEVRWKIIEANDGNNYTFIDPTQLPYNKKWEFPRDKLRLGQILGAGAFGKVVEATAYGLG
TDDNMTTRVAVKMLKPSAHSEEREALMSELKILSHLGCHDNIVNLLGACTQGGPMLMITE
YCSHGDLLNFLRGKAKLFLDSILSGPGVPEVPGDSDHYKNTCSQESRVRSDSGISCSSSD
NYQDMHPAQRPKYCPMVKGSLCEDPETDTWSLDIEDLLRFSYQVAQGMDFLASKNCIHRD
VAARNVLLTDGHVAKICDFGLARDIENDSNYVVKGNARLPVKWMAPESIFDCVYTVQSDV
WSYGILLWEVFSLGKSPYPNIVVDTRFYKMIKDGCHMSQPDFAPPEIYTIMKMCWNMEPT
VRPTFSTIGQLIQSLLPDQPDQTNRNVQDKTPQQEAGEQCDQAKISEDCDQTLNHEEEEQ
PLMMRNNNYQFC
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atgctctccctagcccttttcctgggcatcatgctctgcacagcccaagagcgaagtcct
ccagtgatcaggctgaactctgtgttgctgagggaggctgagaggactttgcctttagga
acgtcgttcaccttgacctgtgagggggacagcacagccacctggtctaccacagcgttc
aaaaggaggaacactaaacaggggagtatgattaccaccaggcaccttacagcagactac
actggcacatacaagtgtgtgtatgacaaccaaccagacctgttctcagaggtccacatc
tatgtgaaagatcccattaacatcctggtaaccccccgcaacatgagagatgttaaggag
ggcggggatcttctcctctgtcagctgacagaccccagtgccacagacctgtccctccgt
atggccaacggagacccaacaccccccgacatgaactacactgtcagtcccaggagaggg
atcctcatcagaaaccttctgaccagccacagtgcaaactacatctgcagcgcaaagatc
aatggggtcacaacacgctcaaaagacatcaccatcaatgtcgttcaaaggttgcgttgg
ccaccgtctgtgttaattgaggtagatgggtatgttagtattgttggagaggagctcctc
atcccctgcatcaccagtaaccctaaccacttctacaacgtcacctggaaacactcctct
ctcaaagcattgaacttcttacaaaaagtaatgcaggacaagcaggtccacatcaccagt
actgtgactatcccagctgtgaccatgtctgacacaggaaacttcacctgtacagccatg
aatgaggctggggccaacaggtccaccacctacctgcaggtcgtagacgagccttacatt
aggctcataccccgcctgtcacccaatctataccaaaatggctccttagtcaatgtgaaa
gaaggggagaaccttgagataagcattctgatcgaggcctatccccaaatcaaggagcat
tggtgggatgtgcccatgtctcacagtcacaacatctccactcatggcgacacatggacc
gcccaagacaattacaggtacgagagcagcctgctgctacacagagtcaggtctgaggag
aggggccagtacaccctccacaccaggagcgcgcgcctcaacagctccatcaccttcaat
atccaagtctaccagaaacccagtgccatgctcagactgaagaattcaaccaccctgatc
tgcacctcctctggatacccagctcccacaatcctctggtaccagtgcccaggaatacaa
agcacgtgtgatgcggataatgacactgtggaggtgcagcctctcttcaccagcaccatg
gaggtgcagagtgagctgaccctcagtccctcaactgaggaggtcacagtggagtgtgtc
acctttaactttgctggcaaaaatcgggacatcttcgtatcgcatgttcttgctaccact
tcatcaacatttgtaatgtccgagctgttcactcccactctcattggagccaccagcaca
gcagcctttctgttccttctgcttgtcatcgttctgtacaaatacaagcagaaacccaaa
tatgaagtccggtggaagatcattgaggccaatgacgggaataactacacctttattgat
cctactcaacttccttataacaagaagtgggagttccctcgtgataagctgaggcttggc
cagattctgggagcaggggcttttgggaaagttgtggaggccactgcctatggtctgggg
accgatgacaacatgaccacccgtgtggcagtaaagatgctcaagccaagcgcccactca
gaggagagagaagctctgatgtcagaactgaagatcctcagtcacctgggatgtcatgac
aacattgttaacctgttgggggcgtgtactcaaggaggcccaatgctgatgatcacagag
tactgtagccatggtgacctgctgaacttcctgcgtggcaaggccaagctgttcctggac
tccatcctgagtggaccaggggttccagaggttccaggggatagtgatcactacaagaac
acatgtagccaggagtctcgtgtcaggagtgacagtgggatctcctgctccagctcagac
aactaccaggacatgcatccagcgcagaggcccaaatactgccctatggtcaaaggttct
ttatgtgaggatccagagacagacacctggtcgctggacatagaagacttgttgaggttc
tcctatcaggtggctcagggaatggacttccttgcatccaaaaactgcattcacagggac
gtggccgctaggaacgtcctattgaccgatggccacgtggctaagatctgcgactttggg
ctcgctcgagacatcgagaatgactccaactatgtggtgaaaggaaatgcccgtctgcca
gtgaagtggatggcccccgagagcatctttgactgtgtgtacacggtgcagagtgatgtc
tggtcctatgggatactgctgtgggaggtcttctctctgggtaagagcccataccctaat
attgtggtggacacccggttttacaagatgatcaaagatggatgccacatgtcacagccg
gactttgcccctccagagatatacaccatcatgaagatgtgttggaacatggaaccaaca
gtgcgtccaaccttcagtaccattggccagcttatccagagtctactgcctgaccagcca
gaccagaccaacaggaatgtgcaggataagacgccacagcaggaggcaggagagcagtgt
gaccaagctaagattagtgaggattgtgatcagacactgaaccacgaagaagaggaacag
cccctgatgatgaggaataacaattaccagttctgctga
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