Salmo trutta (river trout): 115204626
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Entry
115204626 CDS
T08542
Name
(RefSeq) sister chromatid cohesion protein PDS5 homolog B isoform X1
KO
K11267
sister chromatid cohesion protein PDS5
Organism
stru
Salmo trutta (river trout)
Pathway
stru04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
115204626
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
stru03036
]
115204626
03400 DNA repair and recombination proteins [BR:
stru03400
]
115204626
Chromosome and associated proteins [BR:
stru03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
115204626
DNA repair and recombination proteins [BR:
stru03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Shu complex and associated proteins
115204626
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDS5
PI-TkoII_IV
EnP1_C
Motif
Other DBs
NCBI-GeneID:
115204626
NCBI-ProteinID:
XP_029626157
LinkDB
All DBs
Position
12:89216985..89298552
Genome browser
AA seq
1413 aa
AA seq
DB search
MAHSKSRAADGKITYPPGVKEISSNISKEEMVRRLKMVVKTFMDMDQDSEEEKELYLNLA
LHLASDFFLKHPDKDVRLLVACCLADIFRIYAPEAPYTSPDKLKDIFMFITRQLKGLEDT
KSAQFNRYFYLLENIAWVKSYNICFELEDSNEIFTQLYRTLFQVINNGHNQKVHMHMVDL
MSSIVCEGDSVSQELLDTVLVNLVPAHKNLNKQAYDLAKALLKRTAQAIEPYITNFFNLV
LMLGKTSVSDLSEHVFDLILELYNIDSHLLLSVLPQLEFKLKSNDNDERLQVVKLLAKMF
GAKDSELAAQNKPLWQCYLGRFNDIHVPIRLECVKFASHCLMNHPDLAKDLTEFLKVRSH
DPEEAIRHDVIVSIVTAAKKDLTLVNDALLNFVKERTLDKRWRVRKEAMMGLAQIYKKYS
LQGEGGKEAANQISWIKDKLLHIYYQNSIDDRLLVERIFAQYMVPHNLETTERMKCLYYL
YATLDTNAVKALNEMWKCQNMLRHHVKDLLDLVKQPKSDAGSKAVFAKVMVITRNLPDPG
KAQDFVKKLAQVLDDDERIRNQLETLVSPACSCKQAQVCVRDITKKLGSPKQPSNPFLEM
VKFLLERIAPVHIDTESISALVKQVNKSIDGTAEDDEEGVPTEQAIRAGLELLKVLSFTH
PVSFHSAETFESLLGCLKMDDEKVAEAALQIFKNTGSKMEESFPHIKSVLLPVLQTKAKR
GPPRQAKYAIHCIHAMFTHRDTHFAQIFEPLHKGLDLEDLDQLITPLTTLGHLALLAPEQ
FAAPLKSLVANFIVKDLLMSDRIPGKKTTKLWVPDDEVSSETLAKIQGIKLMVRWLLGVK
NTLSKSGNSTLRMLTAILHSDGDLTEQGKMGKPDMSRLRLAAACALLKLAQEPCYHEIIT
LEQYQLCALVINDECYQVRQGFAQKLHKGLCRLRLPLEYLAVFALCAKDPVKERRAHARQ
CLVKNITIRREYLKQHAAVSEKLFSLLPEYVVPYAIHLLVHDPDYIKVQDIEQLKDIKES
LWFILEIIMSKNENNSHAFIRKMVENIKQTKDAQAPTDAKINEKLYTVCDVAMNIIVSKS
TTYSLESPKDPVLPTRYFTKPDKNFSNTKNYLPPEMKSFFTPGKPKAANVLGTVNKPLAS
AGKPIQSKASRMETASNEDSTSNPSSPQRTKTRHDSAEDHSENEDIMKKGDPSDTKDSDK
PRGRKRGAASSNLDDNPSPKPKRGRKKAAAVDPEDQWGEESRLGDAQTEDEQNSPPKKGR
RGRSTKAAAANQETPAKGRGRGRKKATPPPEEEDEGGEEEEEEEEEEEENMELKTKVGRP
ARAARRSTQSCESAESTPVKKRGRPAKAAAQPTKKQPARGRGKAAAAAPPAAKEESDEME
TPAEEEEEEQEEVEKEEEQTTPKGRRKTGGRKR
NT seq
4242 nt
NT seq
+upstream
nt +downstream
nt
atggctcactctaagtctcgagcggccgatgggaagatcacctaccctccgggggtcaag
gagatctccagcaacatctccaaggaggagatggtccgtcggctcaagatggtggtgaaa
acgttcatggacatggatcaggacagtgaggaggagaaggagttgtacctgaacctggct
ctccatctggcgtctgacttcttcctgaagcaccctgacaaggacgttcgcctcctagtg
gcctgctgcttggccgacatcttcaggatctacgccccagaggccccttacacatcacct
gataaactgaaggatatcttcatgttcatcactcgccagctgaaaggactggaggacacc
aagagtgctcagtttaacagatacttctacctgctggagaacattgcgtgggtgaagtcg
tataacatctgctttgagctggaggacagcaatgagatctttactcagctctacaggacc
ctgttccaggtcatcaacaacgggcacaaccagaaggtgcacatgcacatggtggatctg
atgagttctatcgtctgtgagggagacagcgtgtcacaggaactactggacactgtgctg
gtcaatctggtgcctgcacacaagaacctgaacaagcaggcgtatgacctggccaaggct
ctgctgaagaggacagctcaggctatagagccctacatcactaatttcttcaacctggtg
ttgatgttggggaagacgtctgtcagcgatctgtcagaacatgtgtttgacctgatcctg
gagctctacaacatagacagccatctactgctgtctgtactcccacagctagagtttaaa
ctcaagagtaatgataatgatgagcgtctccaggtggtcaagctattagctaagatgttt
ggagctaaagactctgagctggcagcacagaacaaacccctgtggcagtgttacctgggc
aggttcaatgatatccacgtgcccatcagactggagtgtgttaagtttgcctcccactgt
ctcatgaaccacccagacctggccaaggacctcacagaattccttaaggttaggtcacat
gaccccgaggaggccatccgtcacgacgtcatcgtctccatagtaactgcggccaagaag
gacctgactctggtcaacgacgccctgctgaactttgtcaaggagaggactctggacaag
aggtggcgtgtgcgtaaagaggccatgatgggactggctcagatctataagaagtactct
ctccagggagaggggggcaaggaggcagccaatcagatctcctggatcaaagataaacta
ctacacatctactatcagaacagcatcgacgacaggttgttggtagagcgtatctttgcc
cagtacatggtacctcacaacctggagactacagagaggatgaagtgtttgtattatctc
tacgctaccctggacactaacgctgtcaaggctctgaatgagatgtggaagtgtcagaac
atgttgagacaccatgtcaaagatctcctggacctggtcaaacagcccaagtctgatgcg
ggtagcaaggcggtgtttgccaaggttatggtgattacgaggaaccttccagacccaggc
aaggcccaggactttgtgaagaagctagcccaggtcctggatgatgatgagcggatcaga
aaccaactagagaccctggtctcaccggcctgctcctgcaaacaggcccaagtctgtgtg
agagacatcactaagaagttaggcagtcctaaacagcccagtaatcccttcttagagatg
gtcaagttcctgctggaaagaatcgctcctgtacacatcgacacagagtctatcagtgct
ctggtaaagcaggtgaacaagtcgatagatggaacagctgaggatgatgaagagggagtt
cctactgaacaggccatcagggcaggactggaactactcaaggtcctgtcgtttacccac
ccggtgtcgttccactctgcggagacgtttgaatccctgctgggctgtctgaagatggac
gatgagaaggtggccgaggcggcgctgcagatatttaaaaacacaggcagcaagatggag
gagagcttccctcacatcaagtctgtcctgctgccagtactgcagaccaaggctaagaga
ggaccgcctcgacaggccaagtatgccatccactgtatccatgccatgttcacacacaga
gacacacacttcgctcagatctttgagccgctgcataaaggcctggaccttgaggacctg
gatcagctgataacccctctcaccactctgggtcacctggctctgctggccccagaacag
tttgccgctccgctcaaatcactggtggccaacttcatagtcaaggacctgctcatgagc
gacaggatcccaggtaagaagaccaccaagctgtgggttcctgatgatgaggtgtcttct
gaaaccctggccaagatccagggtatcaagttgatggtgaggtggttgttgggcgtaaag
aacaccctgtctaagtctggtaactccactctgaggatgctgactgctatactacacagt
gatggagacctgacagagcagggcaagatgggtaaaccagatatgtccaggctgaggttg
gcagcagcgtgtgccctcctgaagctggcacaggagccctgctaccatgagatcatcacc
ctagagcagtaccaactctgtgccctggtcatcaatgatgagtgttaccaggtgcgccag
ggctttgcccagaagctccataagggtctgtgtcgcctgcgtctgcccctggagtacctg
gcggtgtttgccctgtgtgccaaggaccctgtgaaggagagacgggcccacgccaggcag
tgtctggtgaagaacatcacaatcaggagagagtaccttaaacaacacgctgccgtcagc
gagaagttgttctctctgctccctgagtatgtggtcccctatgccatccacctgctggtc
cacgacccagactacatcaaggtccaggacatcgaacaactcaaagacatcaaggagtct
ctgtggttcatcctggagatcatcatgtctaagaatgagaacaacagccacgccttcatc
aggaagatggtggagaacatcaaacagaccaaggatgcacaggctcctaccgacgccaag
atcaacgagaagttgtacacggtgtgtgacgtggccatgaacatcatcgtctctaagagc
accacctacagcctggagtctcccaaagaccctgtccttcccacacgctacttcaccaag
cctgacaagaatttcagcaacacaaagaactatctccctccagagatgaagtccttcttt
acacctggaaagcctaaagcagctaacgtgttaggaacggtgaacaagcccctggcctca
gcaggcaaacccatccagagcaaagcatcacgcatggagacggctagcaacgaggacagt
acctcaaaccccagctctcctcaacgcaccaagaccagacatgacagtgcagaggaccac
agtgagaatgaagacatcatgaagaaaggagacccctctgatacaaaggacagtgacaaa
ccccggggccgtaaacgaggcgccgcctccagtaaccttgacgacaacccttctcctaaa
cccaagcgcggccgcaagaaggcagcagcagttgaccccgaagaccaatggggagaggag
tcccgactcggcgacgcccagacggaagacgagcagaacagcccgcccaaaaaagggcgt
agggggcggtccacgaaggctgcggcagccaatcaggaaacgccagctaaggggaggggg
cggggccggaagaaggcaactcctccccctgaagaagaggatgagggaggagaggaggaa
gaagaggaggaagaggaagaggaggagaatatggagctgaagactaaggttggaagacca
gcgcgggcggcaaggagatcaacacagagttgtgagtctgctgagtccaccccagtgaag
aagagaggacggccggccaaggcagcagcacagcccaccaagaaacaaccagcgcgtggc
cgtggtaaggcagcagcagcagcaccaccagcagccaaagaggagtctgatgagatggag
acaccggctgaggaagaagaggaggagcaggaggaagtggagaaggaggaagaacagacc
actcctaaaggtcgacggaagaccggaggaagaaaaagatga
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integrated database retrieval system
