Salmo trutta (river trout): 115204640
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Entry
115204640 CDS
T08542
Symbol
supt20h
Name
(RefSeq) transcription factor SPT20 homolog isoform X1
KO
K21245
transcription factor SPT20 homolog
Organism
stru
Salmo trutta (river trout)
Pathway
stru04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
115204640 (supt20h)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
stru03036
]
115204640 (supt20h)
Chromosome and associated proteins [BR:
stru03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
115204640 (supt20h)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt20_SEP
Motif
Other DBs
NCBI-GeneID:
115204640
NCBI-ProteinID:
XP_029626181
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Position
12:complement(90338197..90381501)
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AA seq
827 aa
AA seq
DB search
MQHVLEYALDRAEYIVESARQRPAKRRASSGGKKSLYQKLYELYIEECDKEPELKKLRRN
VNLLEKLMCQESVSCLVVNLYPGNQGYSLMLRGKNGSDSETIRLPYEEGQLLEYLDAEEL
PPILVDLLEKSQVNIFHCGCVVTEVRDYRQSGNTKMPSFQSRHVLLRPTMQTLICDVHAM
TSDHHKWTQDDKFQLESQLLLATADPLCLDPSISVTCTANHLLYNKQKMNTHSMKRCFKR
HSRAALNRQQELSYLPMPPQLRLYDYLQRRKERKPAPSIDLKISKAGNCVDMWKQSNCQL
TVPKEIDVEKYAVVEKSVKLEESQPTVWPAEEVIDDYTFECEVGGKTQRTKVSIFQSVGD
PLVYGKIYCAKQPKAEEDSSDLQLIHPAFLIGSKIDADRFLSQYKGVYESDVKCQVKMSH
NSGFVGQNRLSPSRETEADGLSALVQSSGVLGKGVKHRPPPIKLPSASGSSSTGNLYSSA
QATSGLLKCPTPPPGTGPGSVKPQSLSRKHSVELGQGLQLGGQLGQVGLLSPAALSPMGS
TQRSGTPKPSTPTSTPCSTPHPPDSLLSLCPLPSSVNPTPLEPQALLSPFPQQQLSVMTI
PLPTMGTSIPTGTTSSQVMANPAGLNFINVVGSVCSPQTLMNSSQMLGPGLNLSGLGGLM
PTMQPTTQTGSPFGLNSSPGLRPLNLLQIPTGPLIFNSLQQQQLSQFSPQPSQSATSSPQ
QQVDMGDQGSDQGMGAQQTAVINLTGVGGFMSPQTAVLSQLGCGLDGSGPPLPSPRLQQP
QIQLQFLHQMQQQMAMRGAGSLGASPRLHTASQPRSKRKRSTPQPHP
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atgcaacacgttttggaatatgcattggatcgggctgagtacattgttgaaagtgctcgt
caaaggccagcgaagaggagagcctcatccggagggaagaagagtttataccagaaacta
tacgagctctacatcgaagagtgtgacaaagaaccagagctcaagaagctgcgtaggaat
gtgaacctgctggagaagctaatgtgtcaagagtcggtgtcgtgtctggtcgtcaacctc
taccccggcaaccagggatactccctcatgctccgcggcaagaatggatctgactctgag
actatccgtctgccgtatgaggaaggccagcttttggagtacctggatgctgaggagctt
cctcctatcctggtggatctcttagagaagtcccaggtgaacatcttccactgtggctgt
gtggtaacggaggtcagagactacagacagtctggcaacactaagatgccctccttccag
agcagacacgtcctgctacggcctaccatgcagacactgatctgtgatgtccatgccatg
accagtgaccaccacaaatggactcaggatgataagttccagttagagagccagttactg
ctggccacagctgatcctctgtgtctggatccgtcgatctctgtcacctgtacagccaat
cacctgctctataacaagcagaagatgaacactcactctatgaaacgttgttttaagcgt
cactctcgggcggcgttgaaccgtcaacaggagctgtcctacctgcccatgcccccccag
ctgcgtctctatgactacctgcagaggaggaaggagaggaagcctgccccctcgatagac
ctgaagatctccaaggccggaaactgtgtggacatgtggaagcagagcaactgccagctg
actgtccccaaggagattgatgtggagaaatatgcagttgtggagaagtctgtgaaactg
gaggaatctcaacccactgtctggcctgcagaggaagtgatagatgactatacgtttgag
tgtgaggttgggggtaagacccagaggaccaaagtgtccatcttccagtcggtgggagac
cctctggtctacggaaagatctactgcgccaaacaacccaaggctgaggaggacagcagc
gatcttcagcttatacacccagctttcctaataggctcaaagatagatgccgatcggttc
ctgtctcagtataagggtgtgtatgagtcagacgtgaagtgccaggtgaagatgtctcat
aactcaggattcgtgggacagaaccgtctctcacccagcagagagacagaggcggatggt
ctatcagccctggttcagtcgtcaggtgtgttggggaagggggtgaagcaccggcctccc
cctatcaaactaccctccgcgtcgggcagcagctccacgggtaacctgtatagttcagcc
caggctaccagtggtctccttaagtgtcctacgccccctccaggaacaggccctggctca
gtcaagccccagtcactgagtaggaagcactctgtggagctggggcaggggttacagctg
ggggggcagttaggacaggtggggttgttgtccccggcagccctatctcccatggggtca
acacagagatcggggacccccaaaccctccacccccaccagcaccccttgttccacccct
cacccccctgactccctcctctccctctgtcccctcccgtcctctgtcaaccccacccct
ctggagccccaggccctcctgtctccgttcccccagcagcagctgtccgtcatgaccatc
cctctacccaccatgggaacctccatcccaacgggaaccacctcctctcaggttatggct
aaccctgctggactcaacttcatcaatgtggtgggatctgtctgcagtccccagactctg
atgaattctagtcaaatgttgggtcctggtctcaacctgagtggtctaggaggactgatg
cctaccatgcaaccaaccacacaaacagggagtccgtttggtttgaacagtagtccaggc
cttagacccctcaacctgctgcagatccctacaggtcctctgatctttaactctttacag
cagcagcagctctcccagttctctcctcaaccgagtcagtctgctacgtctagcccacag
cagcaagtagacatgggtgatcaggggtcagaccagggtatgggtgctcaacagactgct
gtcatcaacctgactggagttggaggcttcatgtccccacagacagcagtgctgtcccag
ttaggctgtggtctggatggctctggtccccccctgccctctccaaggcttcagcagccg
cagatacaattgcaattcttgcaccaaatgcagcagcaaatggctatgaggggggcgggg
tctctgggggcgtcgccacggctacataccgccagccaaccaagaagtaagaggaagagg
agcacaccgcagccccacccctaa
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