Salmo trutta (river trout): 115204642
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Entry
115204642 CDS
T08542
Symbol
exosc8
Name
(RefSeq) exosome complex component RRP43
KO
K12586
exosome complex component RRP43
Organism
stru
Salmo trutta (river trout)
Pathway
stru03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
115204642 (exosc8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stru03019
]
115204642 (exosc8)
Messenger RNA biogenesis [BR:
stru03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
115204642 (exosc8)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
115204642
NCBI-ProteinID:
XP_029626188
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All DBs
Position
12:90325661..90338280
Genome browser
AA seq
277 aa
AA seq
DB search
MAAGFKTAEPLEYHRSFLKENCRPDGRELGEFRTTTLNIGSISTADGSALVKIGNTTVMC
GIKGELANPPVDAPNKGYIVPNVDLPPLCSSRFRPGPPGEQAQAASQFIADVIESSAVIQ
KEDLCIVKGKLCWVLYCDIMCLDYDGNLLDACLIALLAALKNARLPEVTVNKETEAPEVN
LENRRSLNIHKHPVGASFIVFDDSIMIVDPTAEEESLSTATITVVTDEEERLCALHKPGG
TSLSGEKLQDCISRATTRHREVRKLIDKVIQSAKTPK
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atggcggctggattcaaaactgctgagcccttggaataccaccggagttttttgaaagag
aactgccgtcctgatggaagggagctgggtgaattcagaaccactacattgaatataggt
tctatatccacagcagacggctcagccctggtaaagattggaaacaccacagtgatgtgt
ggcatcaaaggggaactggcaaacccaccagtggatgcacccaataaaggttacattgta
cccaatgtagacctgcctcctctgtgttcgtcacggttccgtcctggaccacctggggaa
caggctcaggccgccagccagttcatcgctgatgtcatagagagctctgccgtcatccag
aaagaggacttatgcattgtgaaaggaaagctgtgttgggtcctgtactgtgacatcatg
tgtctggactacgatggcaacttgttggacgcctgtctcatcgccctgctggctgctctt
aagaacgcgcgactcccagaggtgacagtcaacaaagagacagaggctcctgaggtgaac
ctggagaacaggagaagtctgaacatccacaaacaccccgtaggggcctctttcatcgtg
tttgacgactctataatgattgtcgaccccaccgctgaggaagagagcctgtctacagcc
acaatcacagtggtaacagacgaggaagagcgactctgcgccctccacaagccaggtggt
acatcattatcaggtgagaagcttcaggattgtatcagccgagccacgacgagacatcgg
gaggtccgcaaactcatcgacaaagtcatacagagcgccaagacaccgaaataa
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