Salmo trutta (river trout): 115204673
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Entry
115204673 CDS
T08542
Symbol
paxbp1
Name
(RefSeq) PAX3- and PAX7-binding protein 1 isoform X1
KO
K13211
GC-rich sequence DNA-binding factor
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
stru03041
]
115204673 (paxbp1)
Spliceosome [BR:
stru03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
115204673 (paxbp1)
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Ortholog
Paralog
GFIT
Motif
Pfam:
GCFC
NTR2
DUF2524
Motif
Other DBs
NCBI-GeneID:
115204673
NCBI-ProteinID:
XP_029626253
Ensembl:
ENSSTUG00000016759
UniProt:
A0A673YYQ7
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Position
12:complement(94388276..94442356)
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AA seq
909 aa
AA seq
DB search
MFKKAKRSNLRRRNESDEDEKEESQPAQQPPPPCGPFTEDIPMLDTPSTDTFSGVTMDVH
HGNGFQSKAIKKEKKSRDVVGVPKASLLSFDDDEDEAEVFRVKKSNHSKKIVKQLKKEYK
EDLEKVCYVKQEPNTDVWSQPLASIKEEPASRAGSEQGEEEMEVDSTDEQEPKSQSLASK
TPTTTAAGAFSNTSTLSTLSNLRPGEIPDAAFIHAARKRRQMARELGGDAPLVETDTPKK
RLVREEEEEGDGSDDEDEDEKRISFSGVKNKSQRTRIAEEIGIEGSDDEALDTGGQDEEV
SRWEQEQIRKGISIPQVQSCQPEDNGSLYYQSSSSYDPQQPYSSSYGLPYSYSSKAEGCT
LVYSAPGGDLSPVTTDLVKTRLRDRLSQMRVGHDANAKRYDQIQEELEAAQNTIRRLEGS
SNDDAEQYKFLQEMRGYVRDLLECFGEKVPTVAELEGAMHQLLRQRACRLVQRRQDDIKD
ESAEFASLSSKAVMAPNLMSLDSFGRDRTVYQEHARQRRIAEREARRTRRRQAREQNGKR
AEHLEGLSSDDEETSTDLTSYCLERDRVVRESNKVFEDVLEDFHSLDSIKSRFEVWRHLY
FTCYRDAYIGLCLPKLFNPLVRLQLITWNPLQEKCANFEYMLWFESLLFYGCEEQSGMKK
GDVDINLLPAIVERVILPKLAVLAEQVWDPLSSSQTTRLVSFVTRLLRGYPTVLNGENRN
TQEFLKTIVLRTRRTLDDDVFLPLYPKNVLENKNSGPYLFFQRQFWSCVKLLGNILQWSG
VLSGSTVRELALDSTLNRYILSALQNAEAGPDSVLKSQRVVECFPTQWFVGLKGQQTLPQ
LEPFCRYLTHLAAALLRGSLGGSDVDKRNAKEQIKDVVKLLARLNALDHLITVATEHGIK
DITPLLDSK
NT seq
2730 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaaaaagcaaaaagatcaaatttaagacggaggaatgagtcagacgaggacgag
aaggaggaaagtcaaccagcccagcagccaccgccgccatgcgggcctttcaccgaggat
atcccgatgctcgatacccccagcacggacaccttctccggggttaccatggacgtacac
cacggcaacgggtttcaatcaaaggccataaagaaggaaaagaaaagtcgggatgtagtg
ggagtaccgaaagccagtttgttaagctttgacgacgatgaagatgaggcggaggtgttc
agagtaaagaaatccaaccacagcaagaagatcgtcaagcagctgaagaaagaatacaag
gaagatctggagaaggtctgctatgttaaacaagagcccaacaccgatgtgtggtcccag
cccctggcctccattaaagaggagcctgccagcagggcaggcagcgaacagggagaagag
gagatggaagtggacagtactgatgaacaggagcctaagagccagagcctcgcctccaag
actcccactacaactgcagctggagccttctcaaacaccagcaccttgtccacgctcagc
aacctacgtccaggtgagattccggacgcggctttcatccacgcggcaaggaagcgtcgt
cagatggccagggagctaggcggcgacgccccactggtggagacggacacgcccaagaag
cgtctggtccgagaggaggaagaggagggagacgggagcgacgacgaagacgaagatgag
aagaggatcagcttcagtggagtcaagaacaagagccagaggaccaggatagcagaggag
ataggtatagagggtagtgatgacgaggcgttggatacaggaggtcaggatgaggaggta
tcacgctgggaacaggagcagatacgcaaagggatcagcatcccccaggtccagtcctgc
cagccagaggacaacggtagcttgtactaccagagcagcagcagctacgacccccagcag
ccctacagctccagctacggcctgccctactcctacagcagcaaggctgagggctgcaca
ctggtctacagcgcccctggtggtgacctctcacccgtcactactgacctggtcaagaca
cgcctcagagacaggctgagccagatgcgtgtggggcatgatgctaatgctaagcgctac
gatcagatccaggaagaactcgaggcagctcagaacaccattcgccggctcgagggttca
tccaatgacgacgcagaacagtataaattcttgcaagagatgcgagggtatgttcgagac
ttgcttgagtgtttcggtgaaaaggttcccaccgtggcggagctggagggcgccatgcac
cagttactaaggcaacgggcctgtcggctggtccagcggcgccaggatgatattaaagat
gaatcggcggagtttgcaagcctttcaagtaaggctgtgatggctcctaacctcatgtct
cttgactcgtttgggagagacaggacagtctatcaggagcacgccagacagagaaggatc
gctgaacgagaagccagacgaacgcggcggcggcaggcgcgggagcagaacgggaagagg
gcggagcatctagaggggctgtcctccgatgatgaggagacatcgactgacctcacatcg
tactgtctggagagagatcgtgtagtgcgtgagagtaacaaggtgtttgaggatgtactg
gaggacttccattctctggacagtatcaagagtcgttttgaggtgtggagacatctctac
ttcacctgctacagagatgcttacatcggactgtgtctgcccaaattattcaacccccta
gtacgactacagctcatcacgtggaaccctctacaggagaagtgtgctaacttcgagtac
atgttgtggtttgagtcgctgttgttctatggctgtgaggagcagagtgggatgaagaaa
ggagacgtggacatcaacctactgccggctatagtggagagagttatactgccaaaacta
gcagtgctagctgagcaggtgtgggatcctctgtccagtagtcagacaactagactagtg
agctttgtgaccagactcctcagaggatatcctactgttctgaatggagagaacagaaac
acacaggagtttctgaagaccatcgtattgaggaccagaaggactctcgatgacgacgtg
tttttacctctttaccctaagaatgtgttggagaataagaacagtggtccgtacctcttc
ttccaaagacagttctggtcctgtgtcaagttgctaggtaacatcctccagtggagtggt
gtattgtctggatccacagtcagagagttggctctggactccaccctgaacagatacatc
ctgtcagccctacagaacgctgaggctgggccagacagcgtactgaagagtcagagggtg
gtggagtgtttccctacccagtggtttgtagggttaaaaggtcagcagaccctgcctcag
ctggagcccttctgtcgttacctcacccacctggccgctgctctgctgagaggttctctg
ggggggtccgacgtcgacaagaggaacgccaaggagcagatcaaggatgtggtgaagctg
ttagctcggctcaacgctctggatcacctcatcaccgtggcaacggaacacggcatcaag
gacatcacacctttactggactccaagtga
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