Salmo trutta (river trout): 115204677
Help
Entry
115204677 CDS
T08542
Symbol
vps36
Name
(RefSeq) vacuolar protein-sorting-associated protein 36
KO
K12190
ESCRT-II complex subunit VPS36
Organism
stru
Salmo trutta (river trout)
Pathway
stru04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
115204677 (vps36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
stru04131
]
115204677 (vps36)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
stru04147
]
115204677 (vps36)
Membrane trafficking [BR:
stru04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
115204677 (vps36)
Exosome [BR:
stru04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
115204677 (vps36)
Exosomal proteins of colorectal cancer cells
115204677 (vps36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
MA3
TssO
Xre-like-HTH
Motif
Other DBs
NCBI-GeneID:
115204677
NCBI-ProteinID:
XP_029626257
Ensembl:
ENSSTUG00000016909
LinkDB
All DBs
Position
12:94776747..94807606
Genome browser
AA seq
386 aa
AA seq
DB search
MDRFTWSNGLLEMNETLVIQQRGVKLYDGEDKAKLDVGIVLLSTHQLIWRDLKNHECCIA
IPLSQIIYFEEQAAGIGKSAKIVVHLHASPANKEPGPYQQSKFSYFKLSFKEHGQIEFFR
RLTEELSQKRWESTPMSQPIPTATNSQTGRTRAVGIVGIERKIEERRKETEKNISEAFED
LSKLMVKAKEMVELSRSIANKIKDKQGDITEDETIRFKSYLLSMGIANPVTRETHGSGTH
YHLQLAKQLGDILLAPLEERGGMMALTEVYCLVNRARGMELLSPEDLVNACKLFESLKLP
LRLRIFDSGVMVVQLQSHSEEEMISSALDNVTDKGSLTAEEFAKLLGLSVLLSKERLLLA
EKMGHLCRDDSVEGLRFYPNLFNSQA
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggacagattcacatggtcaaatggtcttctggaaatgaatgaaacattggtgattcaa
caacgaggtgtcaaactttatgacggagaagacaaggccaagttggatgttggaattgtt
ctgctgagtactcaccagttgatatggagggacctgaagaatcatgaatgctgcatagcc
atacccctttctcagatcatctactttgaggaacaagctgcgggtatcggaaagagtgcc
aagatagtggtccacctgcacgcttccccggccaataaggagccaggaccctaccagcag
agcaagttctcctacttcaaactgtccttcaaagagcatggacagatagagttcttccga
aggctgaccgaggagttgagccagaagagatgggagagtacgcccatgtcacaacccatc
cctacggcaaccaactcacagacaggaaggacgagagcggtgggcatcgtcggcatcgag
aggaagatagaggagaggaggaaagagacagagaaaaacatctcagaggcctttgaggac
ctcagtaagctgatggtgaaggctaaggagatggtggagctgtccaggtccatcgccaac
aaaatcaaagacaagcagggagacatcacagaggacgagactatccggttcaaatcctac
ctgctcagtatgggtatagccaaccccgttaccagagagacgcacggctcgggtacccac
taccacctccagctggccaagcagctgggagacattctgctggcaccactagaggagcgc
ggtgggatgatggctctaactgaagtgtactgtctggtaaaccgagctaggggaatggag
ctgctgtctccagaggatttggtgaatgcctgtaagctgtttgagtcgctgaagctacca
ctgaggttgcgtatctttgacagtggtgtgatggtggttcagctgcagtcccacagtgag
gaggagatgatctcctcggccctggacaacgtaactgataaaggctctctgacagctgag
gagtttgccaagctgctcggtctctctgttcttctgtctaaagaaaggttgttactagca
gagaagatgggtcacctgtgtagagacgactctgtggaaggactacggttctacccgaac
cttttcaacagtcaggcttga
DBGET
integrated database retrieval system
