Salmo trutta (river trout): 115204691
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Entry
115204691 CDS
T08542
Symbol
ddx52
Name
(RefSeq) probable ATP-dependent RNA helicase DDX52 isoform X1
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
stru03009
]
115204691 (ddx52)
Enzymes [BR:
stru01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
115204691 (ddx52)
Ribosome biogenesis [BR:
stru03009
]
Eukaryotic type
90S particles
Helicases
115204691 (ddx52)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
SecA_DEAD
Motif
Other DBs
NCBI-GeneID:
115204691
NCBI-ProteinID:
XP_029626270
Ensembl:
ENSSTUG00000020385
UniProt:
A0A673ZSD7
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All DBs
Position
12:complement(96176799..96201421)
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AA seq
653 aa
AA seq
DB search
MDAFDLFRKLGAGAKFDFKRFGKDAERFKVVRSQEKDVTDHYGIDFFGTGVTHGNQEQRE
EEEEKHEEEGDAGAGKRKRQDEEKTAKKKKEDTQAEVARGETEGILWTSSADRKSKGLKE
GRDRDKTSMKRLQHLHQEKVNRVRTQHRINVHGCDVPDPVCTFSELQSEYGLNPRVLQNL
SAAGLTVPTPIQMQAIPLMMHGRELLACAPTGSGKTLAFCLPLLTHLKQPANLGIRALVI
SPTRELASQTHRELVRLSEGVGFRVHILDKASMAARKCVPSSNNKSDILISTPNRLVFLL
KQDALDLSSVEWLVVDESDKLFEDGRSGFRDQLAAVFQACSSPRVRRALYSATCAPDVEQ
WCRLNLDNLVSVNIGHRNSAVETVEQKLLFVGTENGKLLAVRDIIKKGFLPPMLVFVQSI
DRARELFHELVYEGINVDIIHADRTQQQRDNVISSFRSGDIWVLICTALLARGIDFKGVN
LVLNYDFPTSAVEYIHRIGRTGRAGRTGRAVTFFTEDDKPLLRSIANVIKQAGCPVPGYM
VGFKKIHSKVKRQLQKKPPKRSSIRTTPQYVLKKGRGGEKTGGGAEGQKKRKKKGGLGVP
KKGADGQETKGDEGQETKGDEGQETKGDEGQKSSVGVQSKVQGTRKKKKGKKN
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atggacgctttcgatctgtttcgtaaactcggtgccggagcgaaatttgatttcaagagg
tttggaaaagatgccgaacgatttaaggtggtgaggtcccaagagaaagatgtaactgat
cactatgggatcgactttttcgggaccggagtaacccacggcaaccaggagcagagagag
gaggaggaggagaagcatgaagaggagggagatgctggtgcagggaaaaggaaacgacag
gatgaggagaagactgcaaagaagaaaaaggaagatactcaggctgaagtggcgcgtggg
gagaccgagggcatcctgtggacttcctctgcagacaggaagtctaaaggcttgaaggag
gggagggacagagacaagacatccatgaagagactccaacacctccaccaagagaaggtg
aaccgtgtccgcacgcagcaccggatcaacgtgcacggctgtgacgtgcctgacccagtg
tgcacgttctccgagctgcagtccgagtacggcctgaacccgcgcgtcctccagaacctg
tccgcagctggactcaccgtccccacgcccatccagatgcaggctatacccctgatgatg
catggtcgtgagttgttggcgtgtgctccgacaggttcggggaagactctagcgttttgt
ctccctctcctgactcacctgaaacagcctgctaacctcggcatcagagctctggtcatc
tctcccaccagggaactggccagccagacccacagggagttggtgcgtctgtcggagggt
gtcgggttcagagttcacatactagacaaggcctccatggcagccaggaaatgcgttccc
agctctaacaacaaatccgatattctgatcagtacccccaatagattggtgttcctcctg
aagcaggatgctctggacctcagcagtgtggaatggttggtggtggatgagagtgataag
ctgtttgaggatggtcgtagtggcttcagagaccagctagcagcagtgttccaggcatgt
tcttccccgcgggtcagacgagcgctctacagtgctacctgtgccccagacgtggaacag
tggtgtcgcctcaacctcgacaacctggtctctgtcaacattggacacaggaactctgca
gtggagaccgtggaacagaagctgttgttcgttggaacagagaacggcaagttactggcc
gtcagggacataatcaagaagggtttcttgcctcctatgctggtgtttgtccagtctatt
gatcgagccagagagctcttccatgagctggtctacgaaggcatcaacgtagacatcata
cacgctgaccgcacacagcaacagagagacaacgtgatcagtagttttcggtcgggtgat
atctgggtgttgatctgtacggccctgctggcccgaggtatcgacttcaagggtgtgaac
ctggtgctgaactacgacttccctaccagcgctgtggagtacatccaccgtattggtcgt
actggcagggcaggacgcacggggagagctgtcaccttcttcaccgaggacgacaagcct
cttctacgcagtattgccaatgtgatcaagcaggcaggttgtcctgtccctggctacatg
gttggctttaaaaagatacacagtaaagtcaaacggcagctccagaagaaaccgccgaag
aggagcagtatccgcaccacccctcaatatgtactgaagaagggaagaggaggagagaag
actggaggaggagcggaaggacagaagaaaagaaagaagaaaggaggactgggagtccca
aagaaaggagctgacggacaggagacgaagggagatgaaggacaggagacgaagggagat
gaaggacaggagacgaagggagatgaaggacagaagtcgtctgttggagtccagtctaag
gtccaggggacgaggaaaaagaagaaaggaaagaagaactga
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