Salmo trutta (river trout): 115204692
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Entry
115204692 CDS
T08542
Name
(RefSeq) serine/arginine-rich splicing factor 1B-like isoform X1
KO
K12890
serine/arginine-rich splicing factor 1
Organism
stru
Salmo trutta (river trout)
Pathway
stru03040
Spliceosome
stru05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115204692
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
115204692
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
stru03041
]
115204692
Spliceosome [BR:
stru03041
]
Common components
Common spliceosomal components
SR proteins
115204692
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_3
RRM_7
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
115204692
NCBI-ProteinID:
XP_029626273
Ensembl:
ENSSTUG00000020698
LinkDB
All DBs
Position
12:complement(96211296..96220760)
Genome browser
AA seq
261 aa
AA seq
DB search
MSGDNMSGGGSVVRGPAGNNDCRIYVGNLPPDIRTKDVEDVFYKYGAIRDIDLKNRRGGP
PFAFVEFEDPRDADDAVHGRDGYDYDGYRLRVEFPRSGRGGGRGGGGGGRGGGGDGGGAP
RGRYGPPSRRSEYRVIVSGLPSSGSWQDLKDHMREAGDVCYADVFRDGTGVVEFVRKEDM
TYAVRKLDNTKFRSHEGETAYVRVKVDGPRSPSYGRSRSRSRSNGRSNGRSNSRSRSFSP
PRRSRPSPRYSPRHSRSRSRT
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgtctggagataatatgtcgggcggcgggagcgtggttcgtggcccagcgggaaacaac
gactgtcggatctatgtcggtaacctgccgcctgatattcgcactaaagacgtggaggat
gtgttttataaatacggggcgatccgagatatagatctgaagaaccggaggggtggaccg
ccgtttgcttttgttgaattcgaagaccccagggatgctgatgatgcggtgcacggtcgt
gatggttacgactacgacggttaccgtctccgagtggagttcccccgtagtgggcgtggg
ggagggagagggggtggtggcggtggcaggggtggtggcggcgatggaggaggagcccca
agaggacgatacggacctccctcacggcgctccgagtacagagtcatcgtctcaggtctc
ccctctagtggtagctggcaggacctaaaggaccacatgcgtgaggcaggtgatgtatgt
tacgcggacgtgttccgggacggtaccggcgtggtggagttcgtacgcaaggaggacatg
acctacgctgtccgcaagctggacaacaccaagttccgctcccacgagggagagactgcg
tacgtgcgtgtgaaggtggacggacctcgcagccccagttacggacgctcccgctctcgt
agccgtagcaacgggcgtagcaacgggcgtagcaacagccgctcgcgcagcttctcgccg
ccgcgacgcagccgaccctcgccacgctactcgccacgacactcccgatcacgttcccgc
acctag
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integrated database retrieval system
