Salmo trutta (river trout): 115205048
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Entry
115205048 CDS
T08542
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 12 isoform X1
KO
K15162
mediator of RNA polymerase II transcription subunit 12
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
stru03021
]
115205048
Transcription machinery [BR:
stru03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
115205048
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med12-LCEWAV
Med12-PQL
Med12
Motif
Other DBs
NCBI-GeneID:
115205048
NCBI-ProteinID:
XP_029626470
Ensembl:
ENSSTUG00000023052
LinkDB
All DBs
Position
13:634079..727635
Genome browser
AA seq
2159 aa
AA seq
DB search
MMAAFGILSYEHRPLKRPRLGPPDVYPQDPKQKEDELTALNVKQGFNNQPAVSGDEHGSA
KNVNFNPSKISSNFSSIIAEKLRYNTFPDTGKRKPQVNQKDNFWLVTARSQSSINNWFTD
LSGTKPLTQLAKKVPIFSKKEEVFGYLAKYTVPVMRSAWMIKMTCAYHAAITETKVKKRH
VIDPCIEWTQIITKYLWEQLQKVAEFYRQSPSQGCGSPLPATSAEVDMAMKQWEYNEKLA
MFMFQDGMLDRHEFLTWVLECSEKVRPGEDELLKLLLPLLLQYLGEFVQSAYLSRRLAYF
CTRRLNLLLSDGSLGPGAGGHPAHSILAQPGNALPPTPTSQPAGSNQPQTPFTDFYICPQ
HRPLVFGLSCMLQSIMLCCPSALVWHYSLTDSRNKTGSPLDLLPISPSNLPMPGCNGTFT
QQVRAKVREIEEQVKDRGQAVEFRWSFDKCQETTAGFTIGRVLHTLEVLDNHSFEKSDFS
NSLDSLYNRIFGSGQSKDGHEMSPDDDAVVTLLCEWAVCCKRSGRHRAMVVAKLLEKRQA
EIEAEGSQRCGESEVVDEKGSVSSGSLSAATLPVFQDVLLQFLDTQAPMLTDPSNESERV
EFSNQVLLFCELIRHDVFSHNIYMCTLISRGDLASDSHLPRPRSPSDEPSDESERKEAGS
SVKNEDTGLSESMEIDHNSSTNFDEMFSPPMHCESKGSPSPEKTAQDPDFPLVYEQPRHI
QYATHFPIPQEESASHECNQRLVVLYGVGRQRDEARHAIKKITKDILKVLNRKSTAETGG
DEGQKRKRSKPEAFPTAEDIFSKFQHLSRFDQHQVTSQVSRNVLEQITSFALGMSYHLPL
VQHIQFIFDLMEYSLNISGLIDFAIQLLNELSLVEAELLLKSSSLVGSYTTGLCLCIVAV
LRRYHSCLILNPEQTAQVFDGLRIVVKSGVNPADCSSAERCILAYLYDLYTSCSHLKSKF
GEIFSEFCSKVKNSIYCNIDPSDSNMLWDPVFMMEAIANPSAHNFNHSMVGKILNDSPAN
RYSFVCNVLMDVCVDHRDPERVNDIGILCAELTAYCRSLSAEWLGVLKALCCSSNNGNCG
FNDLLCNVDVSDLSFHDSLATFVAILIARQCLLLEDLVRCVAIPSLLNAACSEQDSEPGA
RLTCRILLHLFKTPQRNPCPQDGAKSDNSSVGIRSSCDRHLLAASQNSIVVGAVFAVLKA
VFMLGDAELKGSGFSHPAGLDEIADDDIGSKKSGGHTVSIETTSLDIYAKYVLKSICQQE
WVGERCLKSLSEDSSALQDPVLVNIQAQRLLQLICYPHRQLDSGEGDNPQRQRIKRILQN
MDQWTMRQSSLELQLMIKQSTNNELYSLLENIAKVTIEVFQKSAEMNSSNPSGNSSAGAG
SSTSNSNNTSKTKPVLSSSERSGVWLVAPLIAKLPTSVQGHVLKAAGEELEKGQHLGSSS
RKERDRQKQKSMSLLSQQPFLSLVLTCLKGQDEQREGLLTSLYSQVQQIVTNWREDQYQD
DCKAKQMMHEALKLRLNLVGGMFDTVQRSTQQTTEWAVLLLDIISSGTVDMKSNNELFTT
VLDMLSVLINGTLAADMSSISQGSMEENKRAYMNLVKKLRKELGDRQSESLEKVRQLLPL
PKQTRDVITCEPQGSLIDTKGNKIAGFEKEGLQVSNKQKISPWDVFEGLKHSAPLSWGWF
GTVRVDRKVTKFEEQQRFLLYHTHLKPKPRSYYLEPLPLPPEEEEPPTPVPQEPEKKMEA
LKPEKSVPVVSSDVTKKKPKKKKTPSTSKTEDYVTRTQGGVPYGTGLAPEILMGQQTHPY
NRLGYSQQAMSMYAQNQPLPPGGPGLDTPYRPARNPQMGKIMPMRPNYPGVMPGGMPGMM
GTEKQYPMGYKPQPNIPQGQILRQHLQVRLNQSIIGQQMRQMTPNQQYGSMQSTQNISQG
YTTYGSHMGMQPHPSQVGGIVPPSYGNQGFQGSHPGANLGVVDSLRQMVQRPSGYVHQQA
PGYSHTMQNTQRFPHQSIHQAPVMQGLSHMGTQGVHPGMRPNQILAEQQQAQQQQAQQQQ
QQYLRQQALRAQQQAQQQAQQQQVQQQQVQQQHQVQPQQVQQQQQQQQVASAPPSGAQAQ
NQALSMQPMPPQQPMFPRQGIQQTQMQQTQQQQQTAALVRQLQQQLSNTQPGQNTNSYY
NT seq
6480 nt
NT seq
+upstream
nt +downstream
nt
atgatggctgcttttgggatcctgagttacgaacaccggccactgaagcggccacgactc
ggacctccggacgtttatcctcaagacccaaagcaaaaagaggatgaattgactgcgttg
aatgtgaagcaaggatttaataatcaaccggcagtgtcaggggatgaacatggaagtgct
aaaaatgtcaacttcaatccctcaaagattagttcaaatttcagcagcatcattgcagag
aagctgcgctacaacacatttccagacacaggcaaacggaagccgcaggttaaccagaag
gacaatttctggctcgttactgccaggtcacagagctcaatcaacaactggtttacagat
ttgtccggaactaaaccactcacccagctggccaagaaggtaccgatctttagtaaaaag
gaggaggtttttggctacttggccaagtacacagtacctgtgatgcgttcagcatggatg
atcaagatgacctgtgcgtatcacgccgccattacagaaacaaaagtcaagaaacggcac
gtgattgacccctgcatagaatggactcagatcatcacaaagtacttgtgggaacagttg
cagaaggtggctgagttctaccgccagtctcccagccagggctgtggctctcctctcccg
gccacctcggccgaggtggatatggccatgaagcagtgggagtacaacgagaagctggcc
atgttcatgttccaggatggcatgctagacagacacgagttcctcacgtgggtgttggaa
tgctccgagaaggtccgacctggagaggacgagcttctaaagctgctgctgcccctcctg
ctacagtacttaggggaatttgtgcagtcggcctacctgtcccggaggctggcctatttc
tgcacgcgacgcctcaacctgctgctaagtgacgggagcctggggcccggcgccggggga
cacccggcccacagcattctggcacagccagggaacgccctgccccccacgcccacctcc
cagcccgcagggagcaatcagccccagaccccctttacagacttctacatctgccctcaa
cacaggcccttggtgtttgggctcagctgcatgctacagagtatcatgctgtgctgtccc
agtgccctggtgtggcactactctctgacagacagccggaacaagactggttccccgctg
gacctattgcccatctccccctccaacctgcccatgccagggtgcaacggcacctttaca
cagcaggtccgtgcaaaggtgcgagaaatagaggagcaggtcaaggaccgagggcaggct
gtggagttccgctggtcctttgataaatgtcaggagacaactgctggcttcaccattggg
agggtcctacacaccttggaggttctagacaaccacagctttgagaagtcagacttcagc
aattccctggattccctttacaaccgcatctttggctcgggccagagcaaagacggtcac
gagatgtcccctgatgacgacgcagtggtgaccttgctgtgtgagtgggcggtgtgctgc
aagagatctggccgccacagggccatggtggtggccaagctactggagaagagacaggca
gagatcgaagccgagggttcacagaggtgcggtgagtcagaggtggtggatgagaaaggc
tcggtgtcatcgggctctctctcggcggccaccctgcctgtgtttcaggacgtgctccta
cagttcctggacacccaggcccccatgctcactgacccaagcaacgagagcgagcgtgtg
gagttctccaaccaggtgctgctcttctgcgagctcatccgccacgatgtcttctcccac
aacatctacatgtgcacgctcatctcccgcggtgacctggcctctgactcccacctgccc
cgcccccgttcccctagcgatgagccctcggacgaatcggagcgcaaggaggctggcagc
agtgtcaagaacgaggacactggtctctcagagtcaatggagattgatcacaactcgagt
actaatttcgatgagatgttttctccccccatgcactgtgagtcaaagggaagcccctcc
cccgagaagactgcccaggatcctgactttccattggtttacgagcagccccgccacatc
cagtatgccacccacttccccatcccccaggaggagagtgccagtcacgagtgtaaccag
cgcctggtggtgctctacggcgtgggaaggcagcgagacgaagcaaggcacgccatcaag
aaaatcacgaaagacatcttgaaggtgctcaaccgcaaaagcacagcagagaccggggga
gatgaaggacagaagaggaagaggagtaagcccgaggccttccccacagcagaggacatc
ttctccaaatttcagcacctctcccgctttgaccagcaccaggtcacctctcaggtgtcc
aggaatgttctggaacagatcaccagctttgccttagggatgtcctatcacctgcccctg
gtccagcacatccagttcatatttgacctcatggagtactccctcaacattagtggcctc
attgactttgccattcagctgctgaatgagctgagcctggtggaggcagagctgctgctc
aagtcatccagcctggtgggcagctacaccacgggcttgtgtctgtgcatcgtggccgtg
ctgcggaggtaccactcctgcctcatcctcaaccccgagcagacggcgcaggtctttgac
gggttgcgcatcgtggtgaagtcaggggtgaaccctgcagactgctcctcagctgagcgc
tgcatcctggcctacctgtatgacctctatacctcctgcagtcacctcaagagcaagttt
ggagagatcttcagtgagttctgctccaaggtaaagaactcaatctactgtaacatcgac
ccgtcagactccaatatgctgtgggaccctgtgttcatgatggaggccatcgccaacccg
tcggcccacaacttcaaccacagcatggtgggtaagatcctcaacgacagccccgccaac
cgctacagttttgtctgcaatgtcctcatggatgtgtgcgtggaccaccgggaccccgag
agagtgaatgacattgggatcctgtgtgcggagctgactgcgtactgtcgctctctgagt
gctgagtggctgggcgtcctcaaggccctctgctgctcctccaacaacggcaactgtggc
ttcaatgacctgctgtgcaacgtggacgtcagcgatctctccttccatgactccctggcc
accttcgtagccatcctcattgcccgtcagtgtcttctcctggaggacctggtccgctgc
gtagccatcccttccctcctcaacgctgcctgcagtgagcaggactctgagcccggagcc
cgtctgacctgcaggattctgctgcaccttttcaagaccccccaacgcaacccctgcccc
caggatggagccaagtcagataactcttctgttgggatccggtcgtcgtgtgatcgccac
cttctggctgcctcgcagaacagcatagtggtcggagctgtctttgctgtcctaaaggct
gtctttatgctgggcgatgcagaactgaagggctcgggattctctcaccccgccggcctc
gatgaaattgccgacgacgacataggttccaagaagtcgggcggccacacagtctctata
gaaacgaccagcctagacatttacgccaagtatgtgctgaagagcatctgccaacaggag
tgggtgggcgagcgctgcctcaagtccctgtcggaggacagcagtgccctgcaggacccg
gtgctggtcaacatccaggcccagcggctgctgcagctcatctgctaccctcaccgccag
ctggacagtggggagggggacaatccccagaggcagcgcatcaaacgcatcctccagaac
atggaccagtggacaatgagacagtcgtccctggaactgcagctcatgatcaagcagagt
actaacaatgagctgtactccctattggagaacatcgccaaggtcaccatagaggtgttc
cagaagtcagcggagatgaactccagcaacccctcaggaaacagctcagccggcgccgga
agctctacctccaacagcaacaacactagcaagacgaaaccagtgttgagttcgtcagag
cggtcaggtgtgtggctggtggcgccactgattgccaagctgcccacctcagtccagggc
cacgtcctgaaggcggcaggggaggagctggagaagggccagcatctgggatcttcctca
cgcaaggagagagaccggcagaaacagaaaagcatgtctctgctgagccagcagcctttc
ctatctctggtgctgacctgtctaaaaggccaggacgaacagcgagagggcctcctcacc
tccctatacagccaggtgcagcagattgtaacgaactggcgggaggaccagtaccaggac
gactgcaaggccaagcagatgatgcacgaggcactgaagctgcggctcaatctggtaggt
gggatgtttgacacggtacaacgcagcacacagcagaccaccgagtgggccgtgctactc
ctcgacatcatcagcagcggtacagtggacatgaagtccaacaatgagctcttcactacg
gtgctggacatgctgagtgtgctgattaatggcacgctggctgctgacatgtccagcatc
tctcagggcagcatggaggagaacaagagggcttacatgaacctggtaaagaagctccgg
aaagagctgggtgaccggcagtcggagagtctggagaaggtgcggcagctgctccctctg
cccaagcagacccgtgatgtcatcacgtgtgaacctcagggctcgctcatcgacaccaag
ggcaacaagattgccggctttgagaaggagggcctccaagtgtccaacaagcagaagatc
tcgccgtgggacgtgttcgagggcctcaagcactctgcccctctctcttggggctggttc
gggacggtgcgcgtggaccgtaaggtgaccaagttcgaggagcagcagcgcttcctcctc
taccacacccacctgaagcccaagccacgcagctactacctggaacccctccccctgccc
cctgaggaggaggagccgcccacacccgtgccccaggagcccgagaagaagatggaggcg
ttgaagccggagaagagcgtccctgtggtgtcgtccgatgtgaccaagaagaagcccaag
aagaagaagacaccatccaccagcaaaactgaggactatgtgacccgtacccagggtgga
gtgccgtatgggacaggtttggccccagagatcctcatgggccagcaaactcacccctac
aacaggttaggctacagccagcaggccatgagcatgtatgcccagaaccagcctctgcct
ccaggaggccctggtttggacaccccgtaccgaccagcccggaaccctcagatgggcaag
attatgcccatgcggcccaactacccgggcgtgatgccgggtggaatgccaggcatgatg
ggcacggaaaagcagtaccctatgggctataagccccagcccaacataccgcagggccag
atcctgcgccagcatctgcaggtcagactgaaccagagtattattggacaacagatgcga
cagatgacacccaaccaacaatacggctccatgcagtcaactcagaacatctcccagggc
tataccacgtacggctcccacatggggatgcagccacatccctcccaggtgggtggtata
gtccctccgtcgtacgggaaccagggtttccagggaagccatccgggggccaacttgggc
gtggtggactctctgaggcagatggtacagaggcccagcggctatgttcaccagcaggca
ccgggctactcgcacaccatgcaaaacacacagagatttccccaccagtccatccatcag
gctcccgtcatgcagggcctgagccacatgggtacgcagggggtccacccgggaatgaga
ccaaaccagattcttgctgagcagcagcaggcccagcagcaacaagcacagcagcaacag
cagcagtatctcagacagcaggcactccgagcccagcagcaggctcagcagcaagctcaa
caacaacaggttcaacaacagcaagttcaacaacaacatcaggtccagccccaacaagtt
cagcagcaacaacagcagcagcaagtagcgtcagcaccgccctccggtgcccaggctcag
aaccaggccctgagcatgcagcccatgcctccacagcaacccatgttcccacgacagggg
atacagcagactcagatgcaacagactcaacagcagcagcagactgcagcactggtcagg
cagctccaacaacaactctcaaatacacaacctggacagaacaccaactcatattactga
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integrated database retrieval system
