Salmo trutta (river trout): 115205100
Help
Entry
115205100 CDS
T08542
Name
(RefSeq) rap guanine nucleotide exchange factor 2-like isoform X1
KO
K08018
Rap guanine nucleotide exchange factor 2
Organism
stru
Salmo trutta (river trout)
Pathway
stru04010
MAPK signaling pathway
stru04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
115205100
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
115205100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGEF
PDZ
RasGEF_N
PDZ_6
RA
cNMP_binding
RA_2
PDZ_2
Motif
Other DBs
NCBI-GeneID:
115205100
NCBI-ProteinID:
XP_029626596
Ensembl:
ENSSTUG00000009412
LinkDB
All DBs
Position
13:complement(5397570..5536105)
Genome browser
AA seq
1675 aa
AA seq
DB search
MASYVDNSFRQAVMMNPAERTQQDLEIVYSYLHGMEALSNLREHQLRIICETVRYQRHEA
NEVLYYPDDVGSCWFILLSGSVFIKESMFLPRSSFGKRSAGSLRRGCECIVLEPSEMIVV
DYMDENEEYFQRQASHRQSRRRFRKINQKGERQTIIDTVDPYPTGKPPIARGYHTLPADF
SRLHLADGLHPQVTHVSSSHSGCSITSDSGSSSLSDIYQATENEPGDMDLSGLPETAVDS
EEDDDEEDIERASDPLMSRDIVRDCLEKDPMDRTDDDIEQLLEFMHQLPAFANMTMSVRR
ELCAVMVFAVVERAGTIVLNDGEELDSWSVILNGSVEVTYPEGRPEILCMGNSFGVSPTM
EKEYMKGVMKTKVDDCQFVCIAQQDYCCILNQVEKNMQKVEEEGEIVMVKEHRELDRTGT
RKGHIVIKGTTERLTMHLVEEHSVVDPTYIEDFLLTYRTFLSSPMVVGKKLLEWFHDPSL
RDKVTRVVLLWVNNHFNDFEGDPAMTHFLEEFENNLEREVRVSKMCGHLRLLNIACAAKA
KLRLVTLTKPSREAPLAFTLLGGSEKGFRIFIDSVEPGSKAAEAGLKRGDQILEVNGQNF
ENVQLTKANEILRNNTHLSISVKTNLLVFKELLARPEHDHEAEGEDPPEVERKNGAPAHL
PKIGDIKKGSRYSIPDLAVDVEQVMGLEKASKKAKANTVGGRNKLKKIFDKTLTSILPPK
PYNDVGVGQSQDDSIVGLKQSKQIPASLPVSSNLSSSNPDLLQSHHRILDFNNQPAPVVT
NMSDQVLRVFKADQQSRYIMIGKDTTAKEVVAQAIREFALTAVPEAYSLCEVSVTPEGVI
KQRRLPEQLSKLADRIQLSGRYYLKSNMETETLCSDEDAQDLLREGQISLLQLSTVEVAT
QLSMRAFELFCAIEPTEYIDDLFKLKSKTGSFCLKRFEEVINQETFWVASEVIREPNQLK
RMKIVKHFIKIALHCRECKNFNSMFAIISGLNLAPVSRLRGTWEKLPSKYEKLFGDLQDL
FDPSRNMAKYRNVLNNQNLQPPIIPLFPVIKKDLTFLHEGNDSKVDGLVNFEKLRMIAKE
IRHVGRMASVNMDPALMFRTRKKKWRSLGSLSQGSANAAVLDVTQTGGHKKRVRRSSFLN
AKKLYEDAQMARKVKQYLSNLSLETNEEALQTLSLQCEPSINTLPKNAGGGKRPDTSPVV
SRAASQQRGQLQKGNQALQVPAVALYPSRKKVPVKDLPPFGTSSPQSLKKILSLSEEASE
RHKRQTEDTVSNASQLSSPPTSPQSSPRKGLGTLKGQSVRKVTFTSKQTATGYPRTGDTY
SDSGHSEISSRSSLVSNSSFDMAQEERKGLRHSGGMGDPHAGGVRLERRATTDSDQYSLG
SYSSMQDCRGLYACAMVLSSPSSEELTQDQGDRVSLDAADSGRGSWTSCSSGSHDNIQTM
QQGRSWETLAFGPGGVVGGSVGVHPPGGPEALLGGPAGLWASQARGSWASASSSSSAAYW
GEDSEGDTGTIKRRGGKDVNTDPETSSITSMGSDEAKQHRRPSPSPITAGNKGLITRKES
RYREPPPTPPGYTALTISDFSEGQTQSPPTAPAHSARRPPDYTTALQRSRMVTQSPDSHH
HHQAQQHAKRQGLHRTRSPGEEEEPEEEEEGESLSPKLVALRKTVAHTTPETTRP
NT seq
5028 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcttatgtcgataacagctttcgtcaagctgtgatgatgaatccggccgaaaga
acgcaacaggacctggagatagtctactcctatcttcacgggatggaggccctttctaac
ctcagagaacaccagctgaggataatatgtgagacagtgcgctatcaaagacacgaagcc
aatgaagtgctctactacccggatgacgttggaagctgctggtttattctactgtccggg
tccgtcttcatcaaggagtccatgttcctgccaagaagcagttttggaaagcgttctgca
gggagcctgagacgcggatgcgagtgcatcgttctggaaccttccgagatgattgtggtg
gactatatggatgaaaatgaggagtacttccagcggcaagcatcgcaccgacagtcccgc
cggaggttccgcaagatcaaccagaagggcgagcggcagaccatcatcgacacggtggac
ccgtaccccaccggcaagccgcccatagccaggggataccatacgctccccgcggacttc
agccgactccacctggccgacggcttgcacccacaggtgacccacgtttcctccagccac
tcaggatgtagtatcaccagcgactctggaagcagcagcctgtcagacatataccaggcc
acggagaacgaaccgggcgacatggacctcagcggcctgcccgagaccgccgtcgactca
gaggaggacgatgacgaggaggacatcgagcgagcgtcggaccccctcatgagccgcgac
attgtgcgggactgcctggagaaggaccccatggaccgcaccgatgacgacatagagcaa
ttactggagttcatgcatcagctgccagcatttgccaacatgaccatgtcggtgaggagg
gagctgtgtgccgtcatggtctttgccgtggtcgagcgggccggcaccatcgtcctcaat
gacggggaagagctggactcctggtcagtgatcctgaatggctcggtggaggtgacgtac
cctgagggcaggcctgagattctttgtatggggaacagctttggggtctcccccaccatg
gagaaggaatacatgaagggagtaatgaagaccaaggtggacgactgtcagtttgtgtgc
atagcgcagcaggactactgctgcatcctcaaccaggtggagaagaacatgcagaaggtg
gaggaggagggcgagatcgtcatggtcaaggagcaccgcgagctggaccgcaccggcacc
cggaagggacacatcgtcatcaaaggtacgacggagcgtctgaccatgcacttggtagag
gagcattcggtggtggaccccacctacatcgaggacttcctgctgacctacagaaccttc
ctctccagccccatggtcgtgggcaagaagctcctcgagtggttccacgacccaagcctc
agggacaaggttacacgggtagtcttgctgtgggtgaacaatcacttcaatgactttgaa
ggcgaccccgcaatgactcactttctagaagagttcgaaaacaatctggagagagaggtc
cgtgtctcaaaaatgtgcggccaccttagactgttaaacattgcctgtgctgctaaagcc
aaactgcgactagtgacactgaccaagccgtcgagggaggccccgctagccttcaccctg
ctggggggctcagagaagggcttccgcatcttcatcgacagcgtggagcccgggagcaag
gccgcagaggccggcctcaaacgaggagaccagattctggaggtgaatgggcagaacttt
gaaaatgtccagctcaccaaagccaatgagatcctgaggaacaacacccacttgtccatt
tctgtgaaaaccaatcttttagtgttcaaggagctactagcccggccggagcacgaccac
gaggcagagggtgaggatccgccagaggtggaacgcaagaatggagccccggcacacctg
cccaagattggggacatcaagaagggctcgcgctactccatccctgacctggcggtggat
gttgagcaggtgatgggcctggagaaggccagtaagaaggccaaagccaacacggtggga
ggaaggaacaagctcaagaagatcttcgacaagacgcttaccagcatccttcccccaaaa
ccatacaacgatgtgggcgtgggccagtcgcaggacgacagcatcgtgggcctgaagcag
tccaaacagattccggcctcgctgcctgtcagcagcaacctatcgtccagcaaccctgac
ctgctgcagtcccaccaccgcatcctggacttcaacaaccaaccggccccggtcgtgaca
aacatgtccgaccaggtgctgcgtgtgttcaaggcagaccaacagagtcgatacatcatg
attggtaaggacaccacagccaaggaggtggtggcccaggccatccgggagttcgccctg
accgcggtgcccgaagcctattcgctgtgcgaggtgtccgtcacgccggagggtgtcatc
aagcaacggcggctaccagagcagctgtccaagctggcagacaggatacagctcagtggc
agatactacctgaagagcaacatggagacagagactctctgttcagacgaggacgcccag
gaccttcttcgtgaaggccagatctccctcctccagctctccactgtggaagtagccacg
cagctctccatgcgtgccttcgagctcttctgcgccatcgagcccaccgagtacatcgat
gacctgttcaagctcaagtccaagacaggctcgttttgcctcaagcgcttcgaggaggtc
atcaaccaagagaccttctgggtggcgtcggaggtgatccgggagcccaaccagctcaag
cgcatgaagattgtcaagcacttcatcaagattgctctccattgtagagagtgcaagaac
ttcaactccatgttcgctatcatcagtggtctgaacctggccccggtatctagactccgg
ggcacgtgggaaaagctccccagtaagtacgagaagctgtttggggacctgcaggacctg
tttgacccgtccaggaacatggccaagtaccgcaacgtgctcaacaaccagaacctccag
ccacccatcatccccctattccccgtcatcaagaaggacctcaccttcctgcatgaaggg
aacgactcaaaagtggacggcctggtgaactttgagaagctgcgtatgatcgccaaagag
atccgccacgtgggtcgcatggcctccgtcaacatggaccctgcactaatgttcagaacc
aggaagaagaaatggaggagtttagggtctcttagccagggcagtgccaacgcggcggtg
ctagacgtcacccagacgggcgggcacaagaagcgggtgaggcgcagctccttcctgaac
gccaagaagctgtatgaggatgcccagatggcccgcaaggtcaagcagtacctgtccaac
ctcagcctggagaccaacgaggaggcgctgcagaccctctcgctgcagtgtgagccctcc
atcaacacactgcccaagaatgctggtggcggtaagaggccagacacgtctccggtggtg
tccagggctgccagccagcagaggggccagctgcagaagggcaaccaggcccttcaggtg
cccgctgtggccctctacccctcccgcaagaaagtgccagtcaaggacctgccaccattc
ggcacgagttcccctcagtcgctgaagaagatcctatcgctgtcggaggaggccagcgag
cgtcacaagcgtcagacggaggacacggtgtctaatgcctcccagctctcctcccctccc
acctccccccagagctcgcccaggaaggggctcgggacactgaagggccaaagtgtccgg
aaggttacctttaccagtaaacagacagccacaggctacccaagaacgggagacacctac
tcggactcgggtcacagcgagatttcgtcgcgctccagcctggtcagcaactcctccttc
gacatggcccaggaggagaggaaggggctcaggcactcaggagggatgggagacccccac
gctggaggtgtgcgtctggagaggagggctacgaccgactctgatcagtacagcctcggt
tcctactcgtccatgcaggactgccggggcctgtacgcctgcgccatggtgctctcctcc
cccagctcggaggagttgacccaggaccaaggggaccgtgtctccctggacgccgcagat
agcggccgcggctcctggacctcctgctcctcgggctcccatgacaacatccagaccatg
cagcagggacgcagctgggagaccctggccttcggtccagggggtgtcgtcggcgggagc
gttggtgtccacccacccggggggcctgaagcattactagggggccccgctggactgtgg
gcgtcccaggctagagggagctgggcatcagcctcttcatcttcctctgcggcgtactgg
ggtgaggactccgagggcgacacgggcacgattaaacggcgaggcgggaaggatgtgaac
accgacccggagacgagtagtatcacatcgatggggtccgacgaggccaagcagcacaga
aggccttcgccatcacccatcactgccggaaacaagggccttatcacgcgaaaggagagc
cggtaccgcgagccccctccaaccccgccgggctacactgccctgacaatctctgacttc
agcgaagggcagacgcagtcgccgcccacagccccggcccactccgcccgccgcccgccc
gattacaccacggctctgcaacgctcgcgcatggtcacccagtcgcctgactcccatcac
caccaccaggcccaacaacatgccaagcgccaagggctccaccgcacccgctcgccaggc
gaggaggaagagcctgaggaggaagaggagggtgagtccttgtctcccaaactagtcgct
ctgaggaagacagtggcacacacaacaccagagacaaccaggccatga
DBGET
integrated database retrieval system
