Salmo trutta (river trout): 115205109
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Entry
115205109 CDS
T08542
Name
(RefSeq) platelet-derived growth factor C-like
KO
K05450
platelet derived growth factor C/D
Organism
stru
Salmo trutta (river trout)
Pathway
stru04010
MAPK signaling pathway
stru04020
Calcium signaling pathway
stru04510
Focal adhesion
stru04540
Gap junction
stru04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
115205109
04020 Calcium signaling pathway
115205109
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
115205109
04540 Gap junction
115205109
09142 Cell motility
04810 Regulation of actin cytoskeleton
115205109
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
stru04052
]
115205109
Cytokines and neuropeptides [BR:
stru04052
]
Cytokines
Growth factors (RTK binding)
115205109
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CUB
PDGF
Motif
Other DBs
NCBI-GeneID:
115205109
NCBI-ProteinID:
XP_029626626
Ensembl:
ENSSTUG00000017565
UniProt:
A0A673Z2R1
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All DBs
Position
13:6140139..6242520
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AA seq
333 aa
AA seq
DB search
MILPFLILLVSLLQKHGSEAESSHISKFQQPSLKEQNGVQDSQHEKIILVTGEGVIHSPD
FPLTYPRSTVLVWRLVASNDNMRIQLSFDERFGLEDPEDGICKYDFVEIEEPSEDTILGR
WCGTQVPASHVSKGGQIRVRFISDEYFPSEPGFSIRYSLLPMPEVTPSLQSADALSEAVA
GLGTVEEVMKYLEPERWQLDMEDLYKPTWHILGKSFLHNKKSRGVDLNLLREEVILYSCT
PRNFSISLREELKRTDAIFWPSCLLVKRCGGNCACCSHRCSDCQCEPTRVVKKYHEVLLL
KHRSGGRGLQKSMTDVPLEHHEECDCVCKDDWD
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgatccttccattcttaatcctacttgtatcgcttctccaaaaacatggctcagaagct
gaatcaagtcacatcagcaaattccaacaaccaagtttaaaggaacaaaacggagtccaa
gattcccagcatgagaagataatcctcgtcacaggagagggagtgatccatagtccggac
ttcccactcacctaccccaggagtaccgtgttggtctggagactagtggcctccaatgac
aacatgagaatccagttatccttcgacgagaggtttggcctggaagacccagaggatgga
atatgcaagtatgattttgtggagatcgaggagccgtctgaggacaccatcctgggccgc
tggtgcgggacccaggtacctgccagccacgtgtccaaaggcggtcagatccgggtgaga
ttcatatctgatgagtacttcccctccgagcctggcttcagtattcgctactccctgctc
cccatgcccgaggtaactccatctctgcagagcgcagatgcgttgtctgaggccgtggct
ggcctcggtaccgtggaggaggtcatgaagtacctggagcctgagagatggcagcttgac
atggaagacctatacaagcccacgtggcacatcctgggaaagtcattcctccacaacaag
aaatccagaggagtggatctcaacctgttgagagaagaggtgatactgtacagctgcacg
ccgcgcaacttctccatctccctgcgcgaggagctgaagaggacggacgccatcttctgg
cctagctgcctcctggtgaagcgctgtgggggcaactgtgcctgctgctcgcatcgctgc
tccgactgccagtgtgagcctacccgggtcgtcaagaagtaccatgaggttctcctgctg
aagcaccgaagcgggggccgaggcctgcagaagtccatgaccgatgtgcccttggaacac
catgaggagtgtgactgtgtttgcaaagacgactgggactga
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