Salmo trutta (river trout): 115205132
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Entry
115205132 CDS
T08542
Name
(RefSeq) calnexin-like isoform X1
KO
K08054
calnexin
Organism
stru
Salmo trutta (river trout)
Pathway
stru04141
Protein processing in endoplasmic reticulum
stru04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
115205132
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
115205132
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
stru03110
]
115205132
04131 Membrane trafficking [BR:
stru04131
]
115205132
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
stru04091
]
115205132
Chaperones and folding catalysts [BR:
stru03110
]
Other chaperones and cochaperones
Calnexin / calreticulin
115205132
Membrane trafficking [BR:
stru04131
]
Endocytosis
Clathrin-mediated endocytosis
Others
115205132
Autophagy
ER-phagy
Other ER-phagy associated proteins
115205132
Lectins [BR:
stru04091
]
L-type lectins
115205132
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Calreticulin
PFF1_TM
Spore_coat_CotO
MAP17
Piezo_TM1-24
DDHD
V_ATPase_I
Motif
Other DBs
NCBI-GeneID:
115205132
NCBI-ProteinID:
XP_029626668
Ensembl:
ENSSTUG00000027494
LinkDB
All DBs
Position
13:8626145..8649368
Genome browser
AA seq
618 aa
AA seq
DB search
MELKVRYVLLLAVGLWSTLLLTTVSAHQEEEDEPIVEMGGDMDVEDDMEELDHGEELLDG
EVEADMPPGPPSVPKVTYKAPEPTGEHFFAESFDMGTLDSWVLSKAKKEDIDEDIAKYDG
KWEVEDMKDGKLPGDKGLVLKSRAKHHAISAQLLRPFIFDTKPLIVQYEVNFQQGIDCGG
AYVKLLSQTPDLNLDEFVDKTPYTIMFGPDKCGEDYKLHFIFRHKNPKTGEYEEKHAKKP
DADLRTYYTDKKTHLYTLVVNPDNSFEVLVDQAVVNSGNLLTDMTPPINPAAEIEDPDDH
KPEDWDERPKIQDPDAVKPEDWDEDAPKQIPDEDAVKPDGWLDDESEYTSDPDAVKPEDW
DEDMDGEWEAPQVPNALCETAPGCGAWQRPMIDNPSYKGKWKAPMIDNPNYQGVWKPRKI
ANPAFFEDLHPFRMTPFNAVGLELWSMSSDIFFDNFFITNERHTADHWANDGWGLKKAAE
GALEPGLVNQMMTAADERPWLWVVYVLTVAVPLVLIIVFCCTGKKTAAADYKKTDEPQPD
VMEEEVVEKAEPDQVKEEKSQPAAAEKNSDAEDSPAEKEEVNEEEGEEDEEEEEDEVNEE
KQEDDLRRSPRNRKLRKD
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atggagctgaaggtgaggtatgttctgctgctggccgtgggactgtggtcaacactgcta
ctgaccacggtgtccgcccaccaggaggaggaggacgagcctatcgtggagatggggggc
gacatggatgtggaagacgacatggaggagcttgaccatggggaggagcttctggacggg
gaggtggaggccgacatgcccccgggaccaccttcagtccctaaagtgacctacaaagcg
cccgagcccacgggggaacacttcttcgccgagtcctttgacatggggacccttgacagc
tgggtcctgtcaaaggccaagaaggaggacattgatgaggatatcgccaagtatgacggt
aaatgggaggtggaggacatgaaggacggcaagctgcccggcgacaagggcctggtcctc
aagtcccgtgccaaacatcacgccatctcagcccagctcctcaggcccttcatcttcgac
accaagcccctcatcgtccaatatgaggtcaacttccagcaagggatcgactgtggcggc
gcctacgtcaaactgctctcccagacacccgaccttaacctggatgagtttgttgacaag
actccctacaccatcatgttcggaccagacaagtgcggcgaggattacaagctgcacttc
atcttccgccacaagaaccccaagactggcgagtacgaggagaagcacgccaaaaagccc
gacgcagacctgcgcacctactacaccgacaagaagacccacctttacacgctggtggtg
aacccagacaacagctttgaggtgctggtggaccaggcggtggtgaacagtggtaacctg
ctgacagacatgaccccccccatcaacccggctgccgagatcgaggaccccgatgaccac
aagccagaggactgggatgagagacccaagatccaggaccctgacgcagtcaaacccgag
gactgggatgaggatgcaccgaaacagatcccggatgaggacgcagtgaagccagacggc
tggctggatgatgagtccgagtataccagcgaccccgacgcggtcaagcccgaggactgg
gatgaggatatggatggtgagtgggaggcccctcaggtccctaacgccctctgtgaaacc
gcccccggctgtggtgcctggcaacggcccatgattgacaaccccagctacaagggcaag
tggaaggcccccatgatcgacaatcccaactaccagggggtgtggaagcccaggaagatc
gccaacccagccttctttgaggacctccatcccttcagaatgacccccttcaacgccgtg
ggcctggagctgtggtccatgtccagcgacatcttctttgataacttcttcatcaccaac
gagaggcacacggccgatcactgggccaacgatggttggggcctgaagaaagctgctgag
ggagcccttgagcccggtctggtgaaccagatgatgaccgcagcagacgagcgtccctgg
ttgtgggtggtctacgtgctgaccgtggccgtgcccctcgtcctgatcatcgtcttctgc
tgcactggaaagaagactgctgcagccgactacaagaagacagacgagccccagccagac
gtgatggaggaggaagtggtggagaaggctgagccagaccaagtcaaggaggagaagagc
cagccagcagcagcagagaagaatagtgatgcagaagacagtcctgcagagaaagaggaa
gtaaatgaggaggaaggggaagaggacgaggaggaggaggaagacgaggtcaatgaagag
aaacaagaagatgacctcagaaggtcccccagaaacaggaaattgagaaaggactga
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