Salmo trutta (river trout): 115205138
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Entry
115205138 CDS
T08542
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-6-like
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
stru
Salmo trutta (river trout)
Pathway
stru04080
Neuroactive ligand-receptor interaction
stru04082
Neuroactive ligand signaling
stru04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
115205138
04082 Neuroactive ligand signaling
115205138
04519 Cadherin signaling
115205138
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
stru04040
]
115205138
Ion channels [BR:
stru04040
]
Ligand-gated channels
GABA-A
115205138
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Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
SAP130_C
TAF4
Motif
Other DBs
NCBI-GeneID:
115205138
NCBI-ProteinID:
XP_029626682
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Position
13:complement(8865482..8904693)
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AA seq
559 aa
AA seq
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MVSAKKEMVTAMYPSYISTLFYFFCLIACVKRISGTIKKDDRIYPENFTRILDRLLDGYD
NRLRPGFGGLVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWVDRRLRYEGPIEILRLN
NMMVANVWTPDTFFRNGKKSVAHNMTAPNRLFRIMKNGTILYTMRLTISAECPMKLVDFP
MDGHACPLKFGSYAYPKTEMIYTWTKGPQYSVEVPPESSSLVQYDLIGHTVSSEEVKSIT
GEYVVMTVHFHLKRKMGYFMIQTYIPCIMTVILSQVSFWINKESVPARTVFGITTVLTMT
TLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNAEMERLKRKPPKCPP
APQTTPVKVKDMEEVLQHNPDTNGNLRKRMNYMSQQDGQKAESNSTAAARGVTRKQPQSV
QSSSSKGATGGAIILPHSSPGPSSQPNTSSLTLSAMNMPLAPPTTERAMTIPANQSQPTA
DSSLQDLLGPRLEHIHLMGKNEPKQSPCSQPTTANMGGTSKIDKYARILFPVSFGAFNMV
YWVVYLSKDTMEAKFRGQI
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atggtttctgccaagaaggagatggtaactgcgatgtaccccagttacatttcgactctc
ttctactttttctgcttgattgcttgtgtaaagagaatctctggaacgataaaaaaggat
gacagaatatatcccgagaatttcacacgcattttagacagactactggacgggtatgac
aacagactgcgacctggatttgggggtctggtgacagaggtgaaaacagacatttatgtg
acaagttttgggcctgtctctgatgttgaaatggagtacaccatggatgtgttcttcaga
cagacatgggtcgacaggaggctgaggtatgagggtcctattgagatcctccgactcaac
aacatgatggtcgccaatgtgtggactcctgacaccttcttcaggaatggcaagaagtct
gtggcacacaacatgactgcccccaacaggttgttccgcatcatgaagaacggcacgatt
ctttacaccatgaggttgactatcagtgcagagtgtcccatgaagcttgtggacttcccc
atggatggacatgcatgccctctcaagtttggaagctatgcataccctaaaacagagatg
atttatacctggaccaaaggaccacagtattcagtggaggttcccccagaatcctccagc
ctagtacagtatgatctcattggccacactgtcagcagtgaggaggtcaagtcaatcaca
ggtgaatacgtggtgatgacagtacacttccacttgaagcggaaaatgggctacttcatg
attcagacgtatatcccctgcatcatgacagtaatcctctcccaagtgtccttctggata
aataaagaatcggtcccagctcgaacagtcttcggcatcaccacggtcctgaccatgacc
acgttaagcatcagcgcacgtcactccctccccaaagtctcctacgccaccgccatggac
tggttcattgccgtgtgtttcgcctttgtcttctccgctctcatcgagttcgctgccgtc
aactacttcaccaacgcagagatggagagactgaaaaggaagccaccaaaatgcccgccg
gcaccccaaacaaccccagtgaaagtgaaggatatggaggaagttctgcagcataaccct
gacaccaatggtaacctgcggaaacggatgaactatatgtcccagcaagatggccagaaa
gctgaatccaacagcacagcagcggcaagaggggtaaccaggaaacaaccccagtctgtc
caatcatcttcatccaagggggcaactggcggtgccatcatcctaccacactccagcccc
ggcccctccagccaacccaacacttcctccttgaccctgtctgccatgaacatgcccctg
gctccacccacaactgagagagcaatgacaataccagccaaccagagccagcccactgct
gactcctcgctccaggaccttctaggacccagactggagcacattcacctcatgggcaaa
aatgagcccaagcagtcgccatgctcccagccgaccaccgccaatatgggcgggaccagt
aaaatcgacaagtatgcccgcatcctgttcccggtgtcctttggcgcattcaacatggtc
tactgggtggtttacttgtccaaagataccatggaggccaaatttagaggccaaatctag
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