Salmo trutta (river trout): 115205160
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Entry
115205160 CDS
T08542
Name
(RefSeq) protein transport protein Sec24B-like isoform X1
KO
K14007
protein transport protein SEC24
Organism
stru
Salmo trutta (river trout)
Pathway
stru04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
115205160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
stru04131
]
115205160
Membrane trafficking [BR:
stru04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
115205160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
HpaB
Motif
Other DBs
NCBI-GeneID:
115205160
NCBI-ProteinID:
XP_029626717
Ensembl:
ENSSTUG00000011201
LinkDB
All DBs
Position
13:complement(10438253..10455839)
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AA seq
1179 aa
AA seq
DB search
MNSTPNGGAAPPYQNGPVGQTYPSTYPPGYYGAGPQQQGYPTISGHCAPALNKSPITNND
HSAYYHHNSHHQPIAAPTVAPSAYRATQGSHPQPYGTLPTSVAPPNPQQAPPFQQPSPYA
PHGAYHGQQQYLTSQALIYPQQVNLVSATPSSQGTPVYPIVSYPSAPGSSQYGTLRSSQS
PTGPGAVSNLIGAPLHQYPPGNGTSHPASTAAVPSGHSMAPPGQPATVNGQGNAVQAAVL
QHYDQSHQAAMAHDHYGVTHNTEGADGDGPPSGTPFTSSPGHQQGMHYGYVANSGASSAN
ASTNAAPLSSSSDEDVDEEEDEEAGGDSSSTTTGSASPVPNSYDSLEGGSYPESSIPPSA
DMTKQAPPFGYGYPSMQPAYQQRPSPGTGSSPSHGRYNQTGYQHLSQPFPNMSQLSAALG
GLSGVPELEVEALRPVNLLQERNLLPHRPLDAPEPNLNADLKKANCSPDTFRCTLTNIPQ
TQALLNKARLPLGLLLHPFRDLAQLPVITSSTIVRCRSCRTYINPFVSFLDQRRWKCSLC
YRVNDVPDEFMYNPVTRSYGEPHKRPEVQNSTVEFIASSDYMLRPPQPAVYLFVLDVSHN
AVDAGYLDVFCQTLLENLDKMPGDTRTRVGFISFNSTIHFYNLHESLSQPQMLVVSDIDD
IFIPTHDSLLVNLKESRALVRVLLTSLPGMFSQTRETHSALGPALQAAYKLMSSTGGRVS
VFQTQLPTLGAGLLQSREDPNQRSSTKGVQHLGPATDFYKKLALDCSGQQIGVDLFLLSS
QYSDLASLACVSKYSAGSIFYYPSLHHVHNPAQLDKFQKDLERYLTRKIGFEAVMRIRCT
KGLSIHTFHGNFFVRSTDLLSLANVNPDSGFAVQMSIEESMADTSLACFQAALLYTSSKG
KRRIRVHTLCLPVVSQLSDVYAGADVQAITCLLANMAIDRSISSSLSDARDALVNAVVDS
LSAYKNTVSNLQQSGLIAPAALCLFPLYVLALLKQKALRTGTSTKLDERVFAMCEFKSQP
LQQIMRTVHPDLYRLDTISDQGALHLNDCIVPQPHLLHLTAEKLTREGAFLMDCGSVFYL
WIGKFCNEMFIRDVLGCPNHASIPPNMTQIPELETPLSERLRALLAWLQDSRTFSSTLHI
VKDDASAKTSFFQHLVEDRSESAFSYYEFLLHIQQQMSK
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
atgaactctacgccgaatggtggagcagcacccccctatcagaatggtccagtaggacag
acctacccatccacatatcctccggggtactatggagcagggcctcaacagcagggctac
ccaaccatttcaggacactgtgcccctgccctcaacaaatctcctattacgaacaatgac
cacagtgcttactaccaccacaacagccaccaccagcctattgctgcgcctactgtagcc
ccctctgcatacagagcaacccaaggctcccatcctcagccctatggcacccttcccacc
tcagttgcccctccaaacccccaacaggcacctccattccaacaaccatccccctacgca
ccgcatggggcctaccatggacagcagcagtacctcacctcccaagcgctaatctatccc
cagcaggttaacttggtgtcagcgacccccagcagccaaggcactcccgtataccccatt
gtctcgtacccctctgcgccaggaagcagccagtacggcactttgcgttcctcccagtct
cccaccggcccaggagccgtttccaacctgataggcgctcccctccaccagtatccccca
ggaaatggcaccagtcacccagcatctactgcagcagttccctctgggcatagcatggct
ccacccggccaaccagccacagtcaacggccagggtaatgcagtccaagccgcagtcctc
cagcactatgaccaaagccaccaggcagccatggcacatgaccactatggcgtcacacac
aacaccgagggtgctgatggagatggaccaccttcaggaactcctttcacttcctccccg
gggcatcagcaaggcatgcactacggatatgtagccaatagtggcgctagctctgccaac
gcctccaccaacgctgcccccttgtcatccagctccgatgaggatgttgatgaggaggag
gatgaggaagcaggtggtgatagttcctcaactaccactggcagtgcgtccccggtgccc
aacagctacgactccctggaaggcggcagctacccagagtcctccattcccccctctgcc
gacatgaccaaacaagccccgccctttggctatggctaccccagcatgcagccagcttat
cagcagaggccgtcccccgggacaggctcctccccctcacacggcaggtacaaccaaact
ggctaccagcatttgtcacagcccttccctaacatgtcccagctgtctgcggccctgggg
ggactgagcggtgtgccagagctggaggtggaggcgctgcggcccgtcaacctcctgcag
gagaggaaccttctgccccaccggcccttggatgcccccgaacccaacctcaacgctgac
ctcaagaaggccaactgcagcccggacacattcaggtgtaccctgaccaacatcccacag
acccaggccctgctgaataaagcccggctgcccctgggcctcctcctgcaccccttcaga
gacctcgcacaactcccagtgatcacttccagcaccatagtgagatgtcgctcctgtcgt
acctacattaaccccttcgtctccttcctggaccagaggagatggaaatgcagcctctgc
tacagggtcaacgatgttcccgatgagttcatgtacaatcccgtgacccgctcctatgga
gagccccacaagaggccagaggtgcagaactccactgtggagttcatagcctcttcagat
tacatgctgcggccccctcaacctgcagtgtacctgtttgtgctggatgtgtctcacaac
gcggtggatgcaggctacctggacgtcttctgtcagactttactggagaacctggacaag
atgccgggggacacgcgtacccgagtgggcttcatcagcttcaacagtaccatccacttc
tacaaccttcacgagagcctctcgcagccccagatgttggtggtctctgacatcgacgat
atcttcattccaacccacgacagtctactggtgaacctgaaggaaagcagagcgctggtg
agggtcctgttgacctccctacccggcatgtttagccagaccagggagacccacagtgct
ctgggcccggcgctgcaggctgcctacaagctcatgtcctccacagggggccgcgtctcc
gtgttccagacccagctacccacgctgggtgccggcctgctgcagtcccgggaggacccc
aaccagaggtccagcaccaagggggtccaacacctgggcccagccacagacttctacaag
aagctggccctggactgttctggtcagcagataggagtggacctcttcctcctcagctcc
cagtactctgacctggcctcactagcgtgtgtgtctaaatactcagcgggtagtatcttc
tactacccctcgttgcaccacgttcacaacccggcccagctggacaagttccagaaggat
ctggagcgctacctcaccaggaagattggcttcgaggctgtcatgaggatacgctgcacc
aaaggcttgtccatccacacattccatgggaacttctttgtgcgctcgacggacctgctg
tccctggccaatgtcaacccagactcgggcttcgctgtgcagatgtctatagaggagagc
atggctgacacctcactggcctgcttccaggctgcgctgctgtacacctccagcaaaggg
aagaggcggatcagggtccatactctgtgtctgccagtggtcagccagctgagtgatgta
tatgccggggctgacgttcaggccatcacctgcctcctagccaacatggccattgaccgg
tcgatatcgtcaagcctgtcggacgcccgagatgccctggtgaatgcggtggtggactcc
ctgagtgcgtacaagaacaccgtctcgaatctgcagcagtctggtctcatcgcccctgca
gccctctgtctcttccccctctacgtgctggcattactcaaacagaaagcactgcgcaca
gggaccagcactaagctggacgagcgcgtcttcgccatgtgcgagttcaagagccagccg
ctgcagcagatcatgcgcacggtccaccccgacctctaccgcctggacaccatttcagac
cagggggcgctccacctgaacgactgcatagtgccccagccccatctgctgcaccttacg
gctgagaagctgaccagagaaggcgctttcctcatggactgtggcagcgtgttttacttg
tggattgggaaattctgtaatgaaatgttcattcgagacgtgctgggctgcccaaaccat
gcttcaataccccctaacatgacccaaattcctgagctggaaactcctctgtctgaacga
ctacgcgcactcctcgcctggctacaggactcgcgaaccttcagctcaacacttcacatc
gtgaaggatgatgcttcagctaagaccagctttttccagcacttggtagaggaccggtcg
gaatcagccttctcctactacgagttcctgctccacatccagcaacagatgtccaagtag
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