Salmo trutta (river trout): 115205199
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Entry
115205199 CDS
T08542
Name
(RefSeq) FACT complex subunit SSRP1-like isoform X1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stru03000
]
115205199
03036 Chromosome and associated proteins [BR:
stru03036
]
115205199
Transcription factors [BR:
stru03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
115205199
Chromosome and associated proteins [BR:
stru03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
115205199
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
Rttp106-like_middle
SSrecog
POB3_N
HMG_box
SSRP1_C
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
115205199
NCBI-ProteinID:
XP_029626783
Ensembl:
ENSSTUG00000030364
LinkDB
All DBs
Position
13:11694992..11707819
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AA seq
711 aa
AA seq
DB search
MGDTLEFNEIYQESKGSWNDGRLRFSKQNLVYKSSKTGKVDNIPAAELSQATWRRVCLGH
GIKLATSSGHVYKYDGFRDTDYERISEFFKANYKVELTEKDMCVKGWNWGTAKFSGPLLS
FDVNDSSVFEIPLASVSQCATGKNEVTLEFHQNDDAEVSLMEVRFYVPPGPADEGADPVE
AFAANVLSKADVIQATGDAVCVFKELQCLTPRGRYDILIYPAFLHLHGKTFDYKIPYTTV
LRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKEEELRLTLNMSEEEVEKRYE
GKLSKNMSGSLYEMVSRVMKALVNRKITVPGNFQGNTPGAQCITCSYKAQSGLLYPLERG
FIYVHKPPVHLRFEEISCVNFARGTTTTRSFDFEVETKQGNQFTFSSIEREEYGKLFDFV
NAKKLNIKNRGFKEKKGMKSKNNEYSDSDEDQHDAYLERMKAEGKIREEGDGSNDSDEET
DESFNPGEESDVAEEYDSNASVSDSGSGGDGTDDEGKKKKPAKKAKVVKERKPRKEKKQK
DTNAPKRPMSSYMLWLNSSRERIKSENPGISITEISKKAGEMWKQIGKEDKEGWDRKAEE
AKKNYEKAMKEYRENGGGSSTPAKKEGKKAGGKKEDKKAGGKKRRSDGGEKEKEQGGNDS
FKSREFISSEESSSEGERKKAKKAKGKPKGKESEEEEEVMTTPPSSEADSD
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgggagacacgcttgagttcaacgagatctaccaggaatccaaggggtcctggaacgac
ggtcgtctgaggttcagtaagcagaacttggtgtataagagcagtaagacggggaaggtg
gacaacatcccggcagcagagctgtctcaggccacgtggaggcgtgtatgcctgggacac
ggcatcaagctggccaccagctccggacatgtctacaaatatgatggcttcagagacacg
gattatgagaggatctcggagttcttcaaggccaactacaaggtggagctgacagagaag
gacatgtgtgtgaagggctggaactggggcactgctaaattctctggtccgttgttgtcg
ttcgatgtgaacgacagctccgtgtttgagatccccctggccagcgtgtcccagtgtgcc
acagggaagaacgaggtgacgctggagttccaccagaacgatgacgctgaggtctctctc
atggaggtccgtttctacgtcccccctggccccgcagacgagggggcagaccccgtggag
gcgtttgccgcgaacgtgctgtctaaggcagatgtgatccaggctacaggagatgctgtg
tgtgtcttcaaagagctgcagtgcctcacacccaggggcaggtatgatatcctcatctac
cccgccttcctccacctccacggtaagacgtttgactacaagatcccctacaccaccgtg
ctgcgtctcttcctgctaccacacaaggaccagagacagatgttctttgtgatcagtctg
gacccgcccatcaagcagggacagacccgttaccacttcctcatcctgctcttctctaag
gaggaggagctccgcctcaccctcaacatgagcgaggaggaggtggagaagcgttatgaa
gggaagctcagtaagaacatgtccggttctctctatgagatggtcagcagagtgatgaag
gctctggtcaacaggaagatcaccgtgcccggaaacttccaggggaacacgccaggggcc
cagtgtataacatgttcctacaaggcccagtccggcttgctctacccgctggagaggggt
ttcatctacgtgcacaagccgcctgtccacctgcgcttcgaggagatctcctgtgtcaat
ttcgccagaggaaccaccacgacgcgctccttcgacttcgaggtggagaccaagcagggg
aaccagttcaccttcagcagcatagagagggaggagtacgggaagctgtttgactttgta
aacgccaagaaactcaacatcaagaacagaggattcaaggagaagaagggcatgaagagt
aagaacaacgagtacagtgactccgatgaagaccagcacgacgcctacctggagaggatg
aaggctgagggcaagatcagagaggagggagacggcagcaacgactcggacgaagagacc
gatgagtctttcaaccctggggaggagagtgatgttgctgaggagtatgacagtaacgcg
tcagtgagcgacagcggcagcggaggcgatggcaccgatgacgagggaaagaagaagaaa
ccggcaaagaaggccaaagtagtgaaggagaggaagccacgcaaagagaagaagcagaag
gacaccaacgcccccaagaggccgatgagttcctacatgctgtggctcaactccagccgc
gagcgcatcaagtcggaaaaccccggaatctcaatcacggagatctctaagaaggccgga
gagatgtggaaacagatagggaaggaggacaaagaggggtgggacaggaaagcagaggag
gctaagaagaactatgagaaagccatgaaggaatacagagagaacggtggaggctcctct
acacccgccaagaaggagggcaagaaggcaggaggcaagaaggaggacaagaaggcagga
ggcaagaagaggaggtctgacggaggagagaaagaaaaggagcaaggagggaacgacagt
tttaagagccgagagtttatctccagcgaggagagttcgtctgagggtgaacggaagaag
gccaagaaagccaaaggcaaacccaagggcaaggagtctgaggaagaggaggaagtgatg
accacgccccccagctctgaggcggactctgactaa
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