Salmo trutta (river trout): 115205250
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Entry
115205250 CDS
T08542
Name
(RefSeq) neuronal PAS domain-containing protein 4A
KO
K26457
neuronal PAS domain-containing protein 4
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stru03000
]
115205250
Transcription factors [BR:
stru03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
115205250
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
bHLH_NPAS4
PAS_3
PAS_11
HLH
Motif
Other DBs
NCBI-GeneID:
115205250
NCBI-ProteinID:
XP_029626884
LinkDB
All DBs
Position
13:14011156..14017362
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AA seq
916 aa
AA seq
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MYRSTKGASKARRDQINAEIRNLKDLLPISDAEKARLSYLHIMSLASMYTRKSVFFSQES
GSAGSLEESARFLSFHELSELVQELPGFLLLLTGEGKLLYLSDSVSEHLGHSMVDLVAQG
DSVYDIIDPTDHFIMRTNLAPPTSPDTDRLFRCRFNTSKSVRRQSAGNKLVLVRARCPFP
PSSSTTPSSYWTSNPVWMCFCSPLEAVPTRSGPGGDHVPALIPPAAENNFFLASFQSQHS
RDMRLQNAQDSVSVYLGLDVSALRSRSWYSLLHPQDLSHASTQHCSLLREGGEGRSEMVV
RVESADHSWVWLYMVLQLEAGDSPISSNNYIISEAEAWSVRQQLSTEQTQLTLVLSTSTS
RQDSLSLSSPDQVFTPGSSGLSAQSFDFSMTVSSSVGSSDETGGATTEPMQVEGDPRSSI
SSIEEESFFQQQQMPAPVQSRSAASSPTPVTVATVADLDFLTQNILLPPSFQLEPPLPAL
PLPLPPVPTSQEQQTKEFVCTPPYTPQLGGGSFLFGEPLFSFDPTGTTTPPPSTTTATAT
TSIAPSLSPSAPPTTASSPAPPSSLCLTGPSTDLFFPTDPCSGSLYEKLPPTPDSPGDGD
CTVMTLPEVRGPLYVDVPLGPFHYPLEGLLTPEASPGKQPGLSFFSLERERDKERAEISL
LAQHISSLAEGFYLDPLLSKLSPPSMSPSSSPPPPALSPSVATAGVDSIHMLGEFYPVKV
WRGLDFPVFQDDDDSLFEESILEALLQDFSAPPPLSPSISPSSPPNPVCWHSPSHFEGVS
HFCSVQSAHCYPTARCGATLAGEAGAMAEWEGLGEEPMEIEVASSPLSSCSSIPASPPLR
LTASPTSAPSTPVAPNTPAVPCAQSLLEELAALEPMFGAGASIAPGLGQQPELYQLQCHQ
PPQCFHKDGSGSVPPF
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atgtatcgatcaacgaagggcgcgtcgaaggctcgaagggatcaaatcaacgcggagatt
cggaacctgaaggacttgcttcccatatccgatgcggaaaaggcacggctttcataccta
catatcatgtcccttgccagcatgtacaccaggaaatcggtcttcttctctcaagaatcg
ggatccgctggcagtctcgaggaaagcgcgaggttcctgtctttccacgagctgtcggag
ctggtgcaggagctaccagggtttctgctcctgctgactggggaaggcaagctgctctac
ctgtcagacagcgtctccgagcacctcggccactccatggtggatctggttgcccagggt
gacagtgtgtatgatatcattgaccctactgaccacttcatcatgaggaccaacctagcc
cctcctacatcacctgacacagatcgtctattccgttgtcgtttcaacacttccaagtcg
gtgcgcaggcagagtgctgggaacaagctggttctggtccgggcacgctgccctttccca
ccctcctcttctaccacccctagctcctactggacatccaatcccgtctggatgtgcttc
tgttcccctctggaggccgtccccacccgctctggtcctgggggggaccacgttcctgct
ctgatccctcctgctgctgagaacaacttcttcctagcctcgttccagtctcaacacagc
cgagacatgaggctccagaatgcacaggacagtgtcagtgtttaccttggccttgatgtg
tcagccctgaggtctcgctcctggtacagcctcctccacccacaggacctgtcacacgcc
tccactcagcactgcagcctgttgagagagggaggagagggtagatctgagatggtggta
cgggtggagtctgcagaccactcctgggtctggctctacatggtactgcagctggaggca
ggagacagccccatcagcagcaacaactacatcatcagtgaggcggaggcgtggtcagtg
agacagcagctgagcacagagcagacccagctgaccctggtactgagtaccagtacctcc
cgccaggacagcctgagcctgtccagcccagaccaagtcttcaccccaggcagcagtggc
ctctcagcccagtcctttgacttcagcatgactgtgtccagcagtgtgggctcctcagac
gagacagggggcgccaccactgagcccatgcaggtggagggcgaccctcgctctagtatt
tcctctattgaggaggagagcttcttccagcagcagcagatgcctgcccctgtccaaagc
cgctctgctgcctcctcccccaccccagttaccgttgcaacggtagcagacctggacttc
ctcactcagaacattctcctgcccccctccttccagctcgagccccctctgcccgccctc
ccccttccactcccccctgtgcccacctcccaggagcagcagaccaaagagtttgtgtgt
acgcccccctacacaccccagctgggcgggggcagcttcctgttcggcgagcccctcttt
agcttcgaccccacaggcaccaccaccccccctccctccaccaccacagctacagccacc
acctccatcgctccctccctctccccctccgccccacccaccacagcctccagtcctgct
cccccctcctccctgtgcctcactggcccctccaccgacctgttcttccctaccgatccc
tgcagtggctctctctatgagaagctaccccccacccctgacagccctggggatggggac
tgcacagtgatgaccttgcctgaggttcggggacccctgtatgtagatgtccctttaggg
ccctttcactaccccctcgagggcctcctcaccccagaggcctcccccggtaaacagcct
ggtctctctttcttctccctggagcgagagagggataaggagagagcagagatctccctc
ttagctcagcacatcagctccttagcagagggattctacctggatcctctcttatccaag
ctatcccctccttccatgtccccctcctcctcccctccccccccggccctctcaccatcc
gtagccaccgctggggttgactctatccacatgctgggagagttttaccccgttaaagtg
tggagaggcctggacttccccgtattccaagatgatgatgactctctgtttgaagagagc
atcttagaagccctgctccaggacttctccgcccctccgcccctctccccctccatctcc
ccatcctctccccccaacccagtgtgctggcactcaccctcccactttgagggggtcagc
cacttctgtagcgtccaatcggcgcactgttaccccacggccaggtgcggggcgacattg
gccggcgaggccggggcgatggcagaatgggagggactgggggaggagcctatggagatc
gaggtggcgtcatcacctctgtcttcctgttcctccatcccagcatcccctcccttgcga
ctcactgcctcccccacctccgccccctccacgcccgtcgcccccaacacgcccgccgtg
ccttgcgcccagtccctcctggaggagctggccgccctggaacccatgtttggggcaggt
gcctcgatcgcccccggcttggggcagcaacctgagttgtatcaactccagtgtcaccag
ccgccacagtgcttccacaaagatgggagtggaagtgttcccccgttctaa
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