Salmo trutta (river trout): 115205262
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Entry
115205262 CDS
T08542
Name
(RefSeq) homeobox protein CDX-1-like
KO
K09312
homeobox protein CDX1/4
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stru03000
]
115205262
Transcription factors [BR:
stru03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
115205262
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caudal_act
Homeodomain
Homeobox_KN
DUF7255
DUF7645
Motif
Other DBs
NCBI-GeneID:
115205262
NCBI-ProteinID:
XP_029626898
Ensembl:
ENSSTUG00000031008
UniProt:
A0A674BHE7
LinkDB
All DBs
Position
13:complement(14198687..14202315)
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AA seq
271 aa
AA seq
DB search
MYVGYLLDKEGSMYHQGPVRRSGINIPPQNFVSTPQYSDFTGYHHVPNMDTHTQSSGAWG
APYVAPREDWGAYSLGPPNTNPTPMNNSSPGHVSYCSPEYNPMHAPGSAVLQPPTDNISV
AQLSPDRERRNSSYQWMSKTVQSSSTGKTRTKEKYRVVYTDHQRLELEKEFHFNRYITIR
RKSELAGNLGLSERQVKIWFQNRRAKERKLIKKKMGSDGSGGSVHSDPGSVSPLPVPGSL
SPSDIHGSLYPPPGMNNLPSIRNIQQVTVTQ
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgtatgtgggatacctcttggataaagaaggcagcatgtatcaccaaggacctgtaaga
cgatcgggaatcaacatcccaccacagaactttgtttccacgccacaatattccgacttt
actggataccatcatgtgccaaacatggatactcatacacagtcttcgggggcttgggga
gctccttatgtcgcaccgagggaggactggggcgcctatagtctggggcctcctaacact
aatcctacgcccatgaacaactcctcgccgggacacgtttcctattgctcacctgaatac
aatcccatgcacgcgccagggtcagcagtattgcaaccacctacagataatatttctgtt
gctcaactttccccggatagagaaaggcgcaattcttcttaccagtggatgagcaaaact
gtacaatcatcttctacgggcaaaacaagaacgaaggagaaatacagagtggtttacacc
gatcaccagagactggaactggagaaggaattccattttaatcgttacatcactatcaga
agaaagtccgaacttgcggggaaccttggcctttcagaacgacaggtgaagatctggttt
caaaatcgcagagccaaggagaggaaattaatcaaaaagaaaatgggatctgatggcagt
ggaggatcagtgcacagtgacccgggttcagtgagtcctctgccggtaccaggctcactc
agtccgtcggatattcacggctctctctacccaccccccggaatgaacaacttgccatct
attaggaacatacagcaggttactgtcactcagtag
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