Salmo trutta (river trout): 115205288
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Entry
115205288 CDS
T08542
Name
(RefSeq) rho guanine nucleotide exchange factor 6-like isoform X1
KO
K05729
Rho guanine nucleotide exchange factor 6
Organism
stru
Salmo trutta (river trout)
Pathway
stru04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
115205288
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
stru04131
]
115205288
Membrane trafficking [BR:
stru04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
115205288
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF67_u2
betaPIX_CC
RhoGEF
SH3_2
CH
SH3_1
SH3_9
RhoGEF67_u1
PH
CENP-Q
CAMSAP_CH
Mis12
Motif
Other DBs
NCBI-GeneID:
115205288
NCBI-ProteinID:
XP_029626949
Ensembl:
ENSSTUG00000037564
LinkDB
All DBs
Position
13:15449376..15479201
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AA seq
766 aa
AA seq
DB search
MNPEEQTVTWLISLGVLNSPKKNIADPEDFLKTSLKDGVVLCKLMERLVPGTVPKYCQEP
RNEADCIANIKEFLRGCTSLKVEGFEPECLYTGENFNKVLTTLLGVNFATQDCGTERSCP
QSGTPAPSQSTTSHTHTSSRSKSLRRQSKPAEMSENGGGGLVLVKARFQFKQNNEDELSF
NKGDLISVSRQEEGGWWEGSLNGKTGWFPSNYVREVKPCDKPVSPKASQLTKNYYSVVVQ
DILEHEREFVKELQTMLSCYLRPLKASDKLSITDSGSLSGNLEEILTFQQGLVLALDECT
KVPESQQRLAACYLNLIGQIRRLYRSYCSSHPSAVCVLTDHSEELGTFMESQGASTPGIL
TLTTSLSKPFMRLDKYPILLQELERHMEEAHPDYSDILKVTVAFKSLVTQCQDLRKRKNL
ELQILSEPVRGWEGDGMKSLGHVAYMSLVHMQNGTNEEKEERYLMMFPGVLVLLSASPRM
SGFIYQGRLPLTGSTVSRQTEDTENGIYTFEITGSTMDRVTVFCSNAKELQEWLDHLHAY
SEGASPVGTIIKPVSMVGTPTHLPSFSTPSQSNRGPLEPPKTTKPWSLSCLRPAPPLKPS
AALGYKERMSSILKDSSKSSGPIKNFFPKRRAERKHSDDEFLLRKSTAALEEDAQILKVI
EAYCTGASQHQASTAVRKVCVPQVLLPEEDKIMVEEMKNNGQTSIEEKSLVDAVYALKDE
VHELKKENKWMKQCLEEEQKSRKELERVVRKLAKQKNDCAWEDGGH
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atgaacccagaggagcagacagtaacgtggctgatatcattaggggtgcttaattcaccc
aagaagaacatagctgacccagaagattttctgaaaacatctctgaaagatggggtcgtc
ttgtgcaaactcatggagcggctcgttcccggcactgttccaaagtactgtcaggaaccg
aggaacgaagccgactgcatcgccaatatcaaggagtttttgagaggatgcacatccttg
aaagtagagggatttgaaccagagtgcctgtacactggggagaactttaacaaagtgctg
accactctgctgggagtcaacttcgccacccaagactgtggcactgagaggtcatgtccc
cagtccggcacacctgctcctagccagtccaccacctcacacacacacacctcttccagg
tccaagtccctgcgcagacaatccaaaccagcggagatgtcggagaacggcggaggcggg
ctggtgctggtgaaggcgcgcttccagttcaagcagaacaacgaggatgagctgtctttc
aacaagggagacctgatcagtgtgtcgcgccaggaggagggcggctggtgggagggctcg
ctcaacggcaagacgggctggttccccagcaactatgtccgcgaggtcaagccctgtgat
aaacctgtgtctcctaaagcatctcaactgaccaagaactactacagtgtggtggtgcag
gacatcctggagcatgagagggagtttgtcaaggagctgcagacaatgttgagctgttac
ctacgacctctaaaggccagcgacaagctgagcattacagacagtggcagtctgagtggt
aacctggaggagatcctcaccttccagcagggtctggttcttgctctggacgagtgcacc
aaggttccagagagccagcagcgattggctgcctgctacctcaacctgattggtcagatc
aggaggctgtaccggtcatactgttccagtcacccctcggctgtctgcgtactcactgac
cacagtgaagagctgggtacgttcatggagagccagggggctagtacgccaggcatcctg
accttgaccaccagcctgagtaaacccttcatgaggctggacaagtatcccatcctgctg
caggagctagagagacatatggaggaggcccacccggactatagtgacatcttgaaggtt
acggtggcttttaaaagcttggtgacccagtgtcaggacctgcggaaacgtaagaacctg
gaactacagatcctgtcagagccagtgagaggctgggagggagacggcatgaagtctctg
ggtcacgtggcctacatgtccctggtccacatgcagaacgggaccaatgaggagaaggag
gagcgctacctcatgatgtttcctggtgtgctggtcctgctgtctgctagtccgcgcatg
agcggcttcatataccagggaaggctgccgctgacaggctccacggtctccaggcagacg
gaggacacagagaacggcatctacacctttgagatcacaggaagcacgatggatcgcgtc
acagtgttctgcagtaacgccaaggagctgcaggagtggctggaccatctccatgcctac
agcgaaggagccagccccgtgggcaccattatcaagccggtcagtatggtgggcaccccc
actcacctgcccagcttcagcacccccagccagtccaaccggggacccctggagcccccc
aagaccaccaagccctggtccctgagctgcttgcgccccgccccacccctcaagccctcc
gctgcactgggctacaaggagaggatgtcttctatcttgaaggactccagtaagagctct
gggcccattaagaatttcttcccaaaacgcagagcagaaagaaaacattccgacgatgag
ttcctcttacggaaaagtacagctgctctggaggaggatgcccagattctgaaggtgatc
gaggcctactgcacaggggccagccagcatcaggccagcacagcggtgaggaaagtgtgt
gtccctcaggtcctgctgccagaggaagacaagatcatggtggaggagatgaagaacaac
ggtcagacaagcatagaggaaaagagtctggttgatgcagtatatgctttaaaggatgag
gtccatgaattaaagaaggagaataagtggatgaagcaatgtctggaggaggagcagaag
tctcgtaaggagctggagagagtggtcaggaagctggccaagcagaagaacgactgtgcc
tgggaggatggagggcactga
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