Salmo trutta (river trout): 115205340
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Entry
115205340 CDS
T08542
Name
(RefSeq) F-box/WD repeat-containing protein 11 isoform X1
KO
K03362
F-box and WD-40 domain protein 1/11
Organism
stru
Salmo trutta (river trout)
Pathway
stru04114
Oocyte meiosis
stru04120
Ubiquitin mediated proteolysis
stru04218
Cellular senescence
stru04310
Wnt signaling pathway
stru04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
115205340
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
115205340
04340 Hedgehog signaling pathway
115205340
09140 Cellular Processes
09143 Cell growth and death
04114 Oocyte meiosis
115205340
04218 Cellular senescence
115205340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
stru04121
]
115205340
03036 Chromosome and associated proteins [BR:
stru03036
]
115205340
Ubiquitin system [BR:
stru04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
115205340
Chromosome and associated proteins [BR:
stru03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
115205340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Beta-prop_TEP1_2nd
WD40_Prp19
Beta-prop_TEP1_C
WD40_WDHD1_1st
WD40_CDC20-Fz
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
Beta-TrCP_D
Beta-prop_EML_2
WDR55
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
ANAPC4_WD40
F-box-like
Beta-prop_IP5PC_F
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
Beta-prop_DCAF12
Beta-prop_SPT8
Beta-prop_DCAF4
NBCH_WD40
WD40_like
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_WDR11_2nd
F-box
Beta-prop_VPS8
WD40_RFWD3
Beta-prop_Nup120_160
Beta-prop_WDR19_1st
PEP5_VPS11_N
WD40_2
DUF1513
Motif
Other DBs
NCBI-GeneID:
115205340
NCBI-ProteinID:
XP_029627049
Ensembl:
ENSSTUG00000043926
UniProt:
A0A674DQ05
LinkDB
All DBs
Position
13:17006315..17026846
Genome browser
AA seq
566 aa
AA seq
DB search
MEPEMEDNTLELMSSVPRSLWLGCSSVAESLCALRCLQSIPSTRAHNQNTSVMESQNHVD
DLSPKKTTVLTKLSNGPVMTGSRKRPSEGNCDKEKEKEQCIALFDQWSETDQVEFVEHLI
SHMCHYQHGHINSYLKPMLQRDFITALPAQGLDHIAESILSFLDAQSLCSAELVCKEWQR
VISEGMLWKKLIERMVRTDPLWKGLSERHQWEKYLFKNRTTEVPPNSYYHSLYPKIIQDI
ETIEANWRCGRHNLQRIQCRSENSKGVYCLQYDDDKIISGLRDNSIKIWDKQSLECLKIL
TGHTGSVLCLQYDERVIVTGSSDSTVRVWDVTSGEVLNTLIHHNEAVLHLRFCNGLMVTC
SKDRSIAVWDMASPTDISLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFV
RTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRI
VSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDDTILI
WDFLNVSTNGQSEGRSPSRTYTYISR
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atggagccggagatggaggacaacacgttggaattaatgagctctgtgcctcgctctctc
tggctgggctgctcctcggtggcagagagtttgtgtgcgctcaggtgcctgcagagcatc
ccctctacccgggctcacaaccagaacacgtcagtgatggagtcccagaaccacgtagac
gacctctccccaaagaaaaccacagttctcaccaagcttagtaatggtcctgtaatgaca
ggctctcgtaagcgtccgtcagaggggaactgtgacaaggagaaggagaaggagcagtgc
atcgccctgtttgaccagtggtctgagactgaccaggtggagtttgtagaacacctcatc
tcccatatgtgccactaccaacacggccacatcaactcctacctcaaacccatgcttcaa
cgtgacttcatcacagcactgccagcccagggcctggaccacatagcagagagcatcctg
tcgttcctggacgcgcagtctctgtgctcggcagagctggtgtgtaaggagtggcagagg
gtgatctcggagggtatgctctggaagaaactcatagaacgcatggtccgcacagacccc
ctctggaaaggcctgtcagagaggcaccagtgggagaagtatctgttcaagaaccgaaca
acagaagtcccgcccaactcctactatcactcgctctaccccaagatcatccaggacata
gagactatcgaggctaactggcggtgtggcagacacaacctacagaggatccagtgtcgg
tcagagaacagtaaaggagtctactgcctccagtacgacgacgataagatcatcagtggc
cttagagacaactccataaagatctgggacaagcagtctctggagtgtctgaagattctg
acaggtcatacaggctctgtgctgtgtctgcagtatgatgagagggtcatagtcactggc
tcctccgactccactgtcagggtgtgggacgtgacgtcaggtgaagtactcaacactctg
atccaccacaacgaggcggtgctccacctgcgcttctgtaacggtctgatggtgacgtgt
tccaaggaccgctccatcgccgtgtgggacatggcctcgcccaccgacatcagcctccgg
cgggtcctcgtggggcaccgcgccgccgtcaacgtggtcgacttcgacgacaaatacatt
gtgtcggcgtctggagaccgcaccatcaaggtgtggagcaccagtacgtgtgagtttgtg
cgcacactaaacggacacaagcgaggcatcgcctgcctgcagtacagagacagactagtg
gtcagcggctcctcagacaacaccatacggttatgggatattgagtgtggagcgtgtttg
cgggtgttggagggtcatgaggaactggtccgctgcattcgcttcgacaacaagaggatc
gtcagtggtgcctacgacggtaagataaaggtgtgggatctgcaagctgctctggatcca
cgagccccagccagcaccttgtgcctgcgcaccctggtggagcactcgggacgtgtgttc
cggctgcagttcgacgagttccagatcatcagcagttcccatgacgacaccatcctcatc
tgggacttcttgaatgtgtcgaccaatggccagtcagagggccggtccccctcacgaacc
tacacctatatctccagatag
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