Salmo trutta (river trout): 115205353
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Entry
115205353 CDS
T08542
Name
(RefSeq) protocadherin beta-16-like
KO
K16494
protocadherin beta
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
stru04515
]
115205353
Cell adhesion molecules [BR:
stru04515
]
Cadherins
Protocadherins
115205353
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
7TM_GPCR_Sri
Peptidase_S55
Motif
Other DBs
NCBI-GeneID:
115205353
NCBI-ProteinID:
XP_029627111
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Position
13:17569484..17572060
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AA seq
810 aa
AA seq
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MGDWRSTGRRGGWQVLFFFLCLCALDSVTGQARYSIPEEQSEGSIVGNIGRDLGLEVTRL
VSGKARIITKGARQYVDLNRDKGLLVVKERIDREELCGQTTPCSFSFELIIENPIQLYRV
TVEVRDINDNTPSFPKDEINLEISENAVSGARFSLESADDPDVGVNGIQNYSLKPTDHFK
LEVHSQADGGKYIEMILQTPLDREEQETLSLMLIATDGGEPQRTGTVRIHITVLDANDNA
PVCGQPVYKTDVKESSPKGTLITTVSANDADQGVNGEVTFSIAHVAKEAKELFELNVDTG
EIKVVGKLDFEKTKNYQLNVKARDHGGFTDTCKVVIQIIDENDNVPTIQLMSFSNSIPED
SPPGTTVAVINVEDADSDGNGVVLCSINADIPFKIESSLTDYYTIVTESTLDRETVSEYN
VTITVSDEGTPPLSSNKNITVKVSDVNDNPPKFDQPVYSKSIQENNSPGFSIFSVRAGDA
DWGQNARVSYFLDDKQVNGVTASSFVSVNSENGAIHAVRSFDYEQIKSFQFNVTARDGGS
PPLSSVVAVRILVQDQNDNWPQVLYPVQTSSSLVAEMVPRSADVGYLVTKVVAVDVDSGQ
NAWLSYKLQKATDRALFEVGLQNGEIRTIRQVTDKDAVKQRLTVVVEDNGQPSRSATVNV
NVAVADSFPEVLSEFTDFTHDKDYNDNLTFYLVLALAVVSFLFITCLVVIISVKIYRWRQ
SRVLYHSNLPVIPYYPPRYADTLGTGTLQHVYNYEVCRTTDSRKSDCKFVRPCSQNVLIM
DPSSTGTMQRMQSEQNILDEPDSPLEVSLL
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atgggtgattggaggtcgacaggccgcagaggcgggtggcaagtactgtttttctttctt
tgtctgtgcgccctagattctgtaactggacaggcacgatattccataccagaggagcag
tcagaggggtcgatcgttggaaacattggtagagatttgggtttggaggtgacgagacta
gtgtccggtaaagctcgcattataacaaaaggagcacgacagtacgtagatctgaaccga
gacaaagggctcctcgttgttaaagagagaatcgaccgagaggagctctgcggacagact
acgccttgtagcttcagctttgagcttatcatagaaaaccccattcagttataccgagtt
acagtagaggttcgtgacattaacgataacacaccgtcctttccaaaggatgaaattaat
ttggaaatcagcgaaaatgccgtgtccggggcgcgtttttctctggagagcgccgacgac
cctgacgttggtgttaacggtatacagaattattcactaaaaccgaccgaccattttaaa
ctagaggtgcacagccaagccgacggtggtaaatacattgagatgattctgcaaaccccg
ctagacagggaggaacaggagactctgtctctgatgcttattgctactgacggaggcgag
cctcagagaactggaactgtccgcatccatattaccgtgctggatgccaatgataatgcg
ccagtatgtggtcaacccgtttataaaacagacgttaaggagagctccccaaaagggact
ttgataaccaccgttagtgcaaatgatgcagaccagggggtgaatggagaggtcactttc
tccatcgctcatgttgctaaagaggcgaaggagctgtttgagctcaacgtggatactgga
gagattaaagtggtaggaaaactggattttgaaaagacaaaaaactatcaattaaacgtg
aaagcgagggaccacggagggtttactgatacctgtaaagttgtcattcaaattattgat
gagaacgataatgtccccacaatacaactcatgtcattttctaactcgattcccgaggac
tctccccctggaaccactgtagctgtaattaatgtagaggacgcagactcagacggcaac
ggtgtcgttctttgctctattaacgcagatattccgttcaaaatagagtcctcgttaacg
gattattataccatagtcactgaaagcacactggatagagaaaccgtgtctgagtataac
gtcaccattacagtttcagatgaagggactccgcctctctccagcaataagaacataact
gttaaagtttcagatgtaaatgataatccacccaagtttgatcaacctgtatatagtaag
tctattcaggaaaacaactcgccagggttttctatattctcagtgagagcgggtgatgct
gactggggtcaaaatgcccgcgtctcctactttctcgatgataaacaagttaacggggtg
actgcttcctctttcgtctcagtaaattcagaaaatggcgccatccatgctgttaggtca
ttcgattatgaacaaatcaagtcgtttcaattcaacgtcactgcccgtgatggagggtct
ccacctctcagttcagtggtcgctgttagaatattagtccaggaccagaacgacaactgg
cctcaggttctgtacccagtccagactagcagctctctggtggctgaaatggtgcctcgt
tcagcagatgtgggatatcttgtcactaaagtggtggctgttgatgtggactctggacag
aatgcctggctctcctataaactgcagaaagcgacagacagggcgctgtttgaagtgggc
ttacagaatggagaaataagaactatacgccaagtcactgataaagatgctgtgaaacaa
agactcactgttgtagtggaggacaacgggcagccctctcgttcagctacagtcaatgtt
aacgtggcggtggcggacagcttccctgaagtgctctcggagttcactgactttacgcac
gacaaggactacaatgacaacctgactttttacttagtcttggctttagctgtagtctca
tttctgttcatcacatgtttagtggttattatatcagtgaaaatatacagatggagacag
tctcgcgtcctctatcattccaatctccctgttattccgtattatccaccgcgttacgca
gacactttggggacaggaactctacagcacgtgtacaattacgaggtgtgcaggacgact
gactccagaaagagtgactgtaagttcgtcagaccctgtagtcagaacgtactgataatg
gaccccagttctacagggacgatgcagcggatgcagagtgagcagaacatcctggatgaa
ccagactccccactagaggtgagtttgttgtag
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