Salmo trutta (river trout): 115205367
Help
Entry
115205367 CDS
T08542
Name
(RefSeq) serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B beta isoform isoform X1
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
stru
Salmo trutta (river trout)
Pathway
stru03015
mRNA surveillance pathway
stru04261
Adrenergic signaling in cardiomyocytes
stru04382
Cornified envelope formation
stru04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
115205367
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
115205367
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
115205367
09158 Development and regeneration
04382 Cornified envelope formation
115205367
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
stru01009
]
115205367
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stru03019
]
115205367
03036 Chromosome and associated proteins [BR:
stru03036
]
115205367
Protein phosphatases and associated proteins [BR:
stru01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
115205367
Messenger RNA biogenesis [BR:
stru03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
115205367
Chromosome and associated proteins [BR:
stru03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
115205367
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Beta-prop_THOC3
WD40_Prp19
Beta-prop_WDR5
Beta-prop_IFT122_1st
WD40_CDC20-Fz
WD40_WDHD1_1st
WDR55
Beta-prop_EML
Beta-prop_WDR3_1st
Beta-prop_EML_2
Beta-prop_IFT140_1st
Beta-prop_CAF1B_HIR1
WD40_Gbeta
Y_phosphatase2
DSE1_N
Motif
Other DBs
NCBI-GeneID:
115205367
NCBI-ProteinID:
XP_029627136
LinkDB
All DBs
Position
13:complement(18492168..18519225)
Genome browser
AA seq
452 aa
AA seq
DB search
MLNPIQVLCSDITSLSLEPEPFASYTEADIISTVEFNHTGELLATGDKGGRVVIFQREHE
CKTEPFSQGEYNVYNTFQSHEPEFDYLKSLEIEEKINKIRWLPQQNAAHFLLSTNDKTVK
LWKVSERDKRPEGYNLKDEEGRMKNLSTVTSLQVPVLKPMDLMVEVSPRRVFANAHTYHV
NSISVNSDHETYMSADDLRINLWHLGITDRSFNIVDIKPVNMEDLTEVITAAEFHPHHCN
LLVYSSSKGTLRLCDMREAALCDKHSKLFEEPEDPSNRSFFSEIISSVSDVKFSHSGRYL
LTRDYLTAKVWDLNMENKPLEIYQVHDYLRSKLCSLYENDCIFDKFECAWNGSDSVIMTG
AYNNFFRMFDRNTNRDVTLEASRESSKPRAVLKPRRVCQGGKRRKDDISVDSLDFTKKIL
HTAWHPTENIIAIAATNNLYIFQDKLNQEMHG
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgttgaaccctatccaggtcctgtgctccgacatcacttccctctctctggagcccgag
ccgtttgcctcttacactgaagctgatatcatctccactgtagagttcaaccacactgga
gagctcctggccacgggggacaagggggggcgtgtggtcatcttccagagggagcatgag
tgtaagacagagccgttctcccagggggagtataatgtctacaacacgttccagagtcat
gagccggagtttgactacctgaagagtctggagatcgaggagaagatcaacaagatacga
tggctgcctcagcagaacgccgcccacttcctcctctccaccaatgataagaccgttaag
ctgtggaaggtgagtgagcgggacaagaggcctgaaggctacaacctgaaggatgaggag
ggcaggatgaagaacctctccactgtcacctcactacaggtgccggtgttgaagcccatg
gatctgatggtggaggtgagtcctcgtcgtgtctttgccaacgcccacacctaccatgtc
aactccatctccgtcaactctgaccacgagacctacatgtcagctgacgacctgaggatc
aacctctggcatctgggcatcaccgaccgcagcttcaacatcgtggacatcaagccagtg
aacatggaggatctaacagaggtaataacagcagcagagttccatcctcaccactgtaac
ctgttggtctatagcagcagtaaaggaactctacggctctgtgacatgagagaggccgca
ctgtgtgacaaacactccaaactgtttgaggagccggaagaccccagtaaccgctcattc
ttctcggagatcatctcgtctgtgtcggacgtcaagttcagccacagcgggcgctacctg
ctgaccagagactacctcaccgccaaggtgtgggacctcaacatggagaacaagcccctg
gagatataccaggtgcatgactacctccgcagcaagctttgctccctgtacgagaatgac
tgcatcttcgacaagtttgagtgtgcctggaacggctcagacagtgtgatcatgactggg
gcctacaacaatttcttccggatgtttgaccggaacaccaaccgtgacgtgaccctggag
gcgtccagggagagcagtaagccccgggccgtgctcaagcctcggcgcgtctgccagggc
gggaaacgacgcaaggatgacatcagcgtggacagcctggacttcaccaagaagatcctg
cacacggcctggcaccccacggagaacatcatcgccatcgctgccaccaacaacctgtac
atcttccaggacaaactcaaccaggagatgcatggctga
DBGET
integrated database retrieval system
