KEGG   Salmo trutta (river trout): 115205481
Entry
115205481         CDS       T08542                                 
Symbol
rnf4
Name
(RefSeq) E3 ubiquitin-protein ligase RNF4
  KO
K22651  E3 ubiquitin-protein ligase RNF4 [EC:2.3.2.27]
Organism
stru  Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:stru00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:stru04121]
    115205481 (rnf4)
Enzymes [BR:stru01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     115205481 (rnf4)
Ubiquitin system [BR:stru04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    115205481 (rnf4)
SSDB
Motif
Pfam: zf-RING_2 zf-C3HC4_2 zf-C3HC4 zf-RING_5 zf-RING_UBOX zf-C3HC4_3 zf_RING_Vps8 Prok-RING_4 zf-RING_4 RING_XB3-XBAT31 zf-rbx1 zf-C3HC4_4 TerY_C zf-UDP zf-RING_11 IBR_1 zf-Nse zf-RING_10 Zn_ribbon_6 zf-RING_16 DZR C5HCH Rtf2
Other DBs
NCBI-GeneID: 115205481
NCBI-ProteinID: XP_029627356
Ensembl: ENSSTUG00000029067
UniProt: A0A674B6H1
LinkDB
Position
13:25102712..25106175
AA seq 188 aa
MSSTTQRKRRTGAPSSSRRTAKSSRVTTTVPLRAAAAAETIAVLESSRTSSEEVVDLTCE
GSEPTVVDLTNNDSVVVVDEGLRGRRGVGGESYVLSSDEEGDANGSLSADLLSSLQASSR
ARSTPGTVSCPVCMDSYAEIIESGRLVVSTKCGHLFCSQCLRDSLSRSHTCPTCRKKLTH
RQYHPIYI
NT seq 567 nt   +upstreamnt  +downstreamnt
atgagcagtacaacacagaggaagagaaggactggagccccctcaagttccagacgcaca
gccaagagtagcagagtcaccaccactgtgccacttcgtgcagcagctgctgctgagacc
attgctgtgctggagagcagtaggactagcagtgaggaggtggtggacttgacatgtgaa
ggttctgagccgactgtggttgacttgaccaacaatgattctgtggtggttgtcgatgaa
gggcttcggggcagacgtggagttggcggtgagagttacgtgctgagcagtgatgaggag
ggggatgccaatgggagcctcagtgctgacctcctatcttccctacaggccagcagtaga
gccaggtctacgccaggtacagtcagctgcccagtgtgtatggactcctatgctgagatc
attgaaagtggcagactagtggtctccacaaaatgtggtcaccttttctgcagtcagtgc
ctccgcgactcactgtcgagatcccacacttgcccaacctgcagaaagaaactgacccac
aggcaataccaccccatatacatctga

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