Salmo trutta (river trout): 115205514
Help
Entry
115205514 CDS
T08542
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 1-like
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
stru
Salmo trutta (river trout)
Pathway
stru00061
Fatty acid biosynthesis
stru00071
Fatty acid degradation
stru01100
Metabolic pathways
stru01212
Fatty acid metabolism
stru03320
PPAR signaling pathway
stru04146
Peroxisome
stru04216
Ferroptosis
stru04920
Adipocytokine signaling pathway
Module
stru_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
115205514
00071 Fatty acid degradation
115205514
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
115205514
09143 Cell growth and death
04216 Ferroptosis
115205514
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
115205514
03320 PPAR signaling pathway
115205514
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
stru01004
]
115205514
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
stru04147
]
115205514
Enzymes [BR:
stru01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
115205514
Lipid biosynthesis proteins [BR:
stru01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
115205514
Exosome [BR:
stru04147
]
Exosomal proteins
Exosomal proteins of breast milk
115205514
Exosomal proteins of breast cancer cells
115205514
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
115205514
NCBI-ProteinID:
XP_029627440
Ensembl:
ENSSTUG00000031870
LinkDB
All DBs
Position
13:25755528..25779226
Genome browser
AA seq
697 aa
AA seq
DB search
MQAQQLLNQLRFPELDEVRQYLRSLSTHTLVGMGAFAALTTYWYTTRPKALKPPCDLRMQ
SVEVPGGEYARRSALMDSDKHMTHLYNDAKTMYEFFLRGARVSNNGPCLGARQPSQPYEW
LSYSEVAEKAENLGSALLHRGHTQTKDQFIGIFAQNRPEWTIAELACYTFSLVAVPLYDT
LGTEAIAYVIDKATISSILCDVPEKARLVLECVSGREHSVRTIILMEPFDDELVAKGKDC
GIDILSLSQVETIGKAHHHQPVPPGPEDMAVVCFTSGTTGNPKGAMLTHGNVASNCSAFI
KVIQGHLILDHHDVHISYLPLAHMFERVVEGVILVHGGRIGFFQGDIRLLMDDLTTLRPT
VFPVVPRLLNRMFDKIYGQANTSLKRWVLDFAFKRKESELLSGIIRRDSIWDKLIFRKVQ
ASLGGRVRLMITGAAPVSATVLTFLRAALGCQLYEGYGQTECTAGCTMTVPGDWTAGHVG
APLPCNSVKLVDVAEMNYLAANGEGEVCVKGANVFLGYLKDPEKTEETIDANGWVHTGDI
GKWLPNGTLKIVDRKKHIFKLAQGEYIAPEKIENIYTRSDAVAQVFVHGDSLQACLVAII
VPDPDFLPGWAKKRGLEGSYGDLCNNMDVKKAILEDILKLGKDSGLKSFEQVKDITLFTE
MFSIQNGLLTPTLKAKRAELRNYFREQIDKLYSKIKM
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgcaagcccagcagctcctgaatcagctgcgcttccccgagctggatgaggtgcggcag
tacctgcgcagcctgtccacacacacgttggttggtatgggggcattcgctgctctcaca
acctactggtacaccacccggcccaaggccctgaagccaccatgcgacctgagaatgcag
tccgtcgaggttccgggaggagagtatgcccgccggtcagcgctgatggacagcgacaaa
cacatgacccacctgtacaacgacgccaagaccatgtatgagttcttcctcaggggcgca
cgggtctccaacaatggtccctgtcttggagcaagacaaccaagccagccctatgagtgg
ctgtcatactccgaggtagcagagaaggcagagaacctgggctcagcgctgctccacagg
ggacacactcaaaccaaagaccagttcattggcatcttcgctcagaaccgaccagagtgg
accatcgctgagctggcctgctataccttctccctggtggctgtgcccctgtatgacact
ctgggcactgaggccatcgcctacgtcatcgacaaggccaccatttccagcatactgtgt
gacgtccctgagaaggccaggctggtcctggagtgtgtctctggcagggagcacagtgtc
agaaccatcatcctcatggagccctttgatgatgagctggtggccaaggggaaggactgt
ggcatcgacattctcagcctgagccaagtggagactatcggcaaggcccaccaccaccaa
ccagttcctcccggtcctgaagacatggctgtcgtctgcttcaccagtggaaccacaggg
aatccaaagggtgccatgctgacacatgggaatgttgcttccaactgctctgcctttatc
aaagtcattcagggtcacctcatattagaccaccacgatgttcatatatcctacctgccc
cttgctcatatgttcgagagggttgtagagggggtcattctggtgcatgggggtcggatt
ggtttcttccagggagacatccgcctgctgatggatgacctcaccaccctgaggcctaca
gtgtttcctgtggtgccacgcctcctcaacaggatgttcgacaagatctatgggcaggct
aacacctctctgaagaggtgggtgctggactttgcctttaaaaggaaagagtctgagctg
ctgagtggcatcattaggagggacagcatctgggacaaactcatctttaggaaagtgcag
gccagtctgggaggacgggtgcgtctgatgataacaggtgctgcccctgtgtctgccacg
gtgctgacgttcctgcgagccgctctgggctgccaattgtatgaggggtatggacagact
gaatgcacagcgggctgcacaatgacagtaccaggggattggacagcaggtcatgttgga
gcgcccctgccatgtaactcggtgaagctggtggatgtggctgagatgaactacctggct
gccaatggagagggagaggtgtgtgtgaaaggagctaacgtgtttctgggctacttgaag
gacccagagaagactgaggagaccattgatgctaacggctgggtccacacaggggacatt
ggcaagtggttaccgaacggcactttgaaaattgtggacaggaagaagcacatcttcaag
ctggcccagggagagtacattgcaccggagaagattgagaatatctacaccaggagtgac
gcagtggcacaggtctttgtgcacggggacagcctacaggcatgcctagtagccatcatt
gtaccagatcctgacttccttcctggctgggccaagaagagaggactggagggatcctac
ggagacctatgcaacaacatggatgtaaagaaggccatcttggaagacatcttgaaacta
ggaaaagacagtggtctgaaatcttttgagcaggtgaaggacatcaccctgttcacagag
atgttttctatccaaaatggacttctcactcccaccctgaaagccaagagagcagaactc
aggaactacttcagggagcagattgacaaactgtactccaagatcaagatgtga
DBGET
integrated database retrieval system
