Salmo trutta (river trout): 115205571
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Entry
115205571 CDS
T08542
Name
(RefSeq) autophagy-related protein 2 homolog A-like isoform X1
KO
K17906
autophagy-related protein 2
Organism
stru
Salmo trutta (river trout)
Pathway
stru04136
Autophagy - other
stru04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
115205571
04136 Autophagy - other
115205571
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
stru04131
]
115205571
03029 Mitochondrial biogenesis [BR:
stru03029
]
115205571
Membrane trafficking [BR:
stru04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
115205571
Mitochondrial biogenesis [BR:
stru03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
115205571
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG2_CAD
VPS13_N
EKLF_TAD1
Motif
Other DBs
NCBI-GeneID:
115205571
NCBI-ProteinID:
XP_029627563
Ensembl:
ENSSTUG00000036432
LinkDB
All DBs
Position
13:27518308..27562074
Genome browser
AA seq
2013 aa
AA seq
DB search
MSRWLFPWSGSIKKRACRYLLQHYLGHFFQERLSLEQLSLDLYNGSGVIKEINIDVWAVN
ELLESLGAPLEIVDGFVSSIEVTIPWSALVTDHCTLVISGLQITCRPKYRTSGGLDSQGW
STCMTSSMQLAQECLKDPPEVSEEPPAPLEGLEMFAQTIETVLRRIKVTLLDTIIRIEHQ
PLDMETGIALEVHIKRLEYCDEAVKDPSQTVPVDIHQPPAFLHKILQLSSVQLLYETTGG
PQGPLRADTPGSASASDEEVEGEDNDPPATPTSLPLTTQRPLLIGSCSGFMETTVKIKQN
DMLPGPKLELDGKVGCLHLLLSPDQITHLTDLLSALCIDTEPEASGAGVHSRPLDSEDLR
LIEEDLSKQLSSSPGDGDPDWDEEPDMEPYLTGLENGDMFFSMGPGMTSSVTSALSGSSL
SDSMASSTHSQASYAQGLPQGPRRYPVPGSLSSLPQCNRIPASPRPGRRSQSEPLKPEAL
LRLSLGGLTLTLLEQEPYPGPDGVSSLTQVSQVFFRELAFFKDSMFSERDFHHLRASFAK
ACPHSHLRMTGAAVQVACEMRSAGRHSRAVTSDLSFSRLELLECLWEPGKPQYTELLQFQ
HAGMFTVGGATARPCAQLHYSLTEKHLRKGRQRVVRRDSVVRVELGELSAELDLDILSRL
EPLSRACSHCPTQTGGGPVHTQTQSRELHSSLSLLSPHAILKLRFPIPDLRPLPFRRPPS
QRAVRQETLVLELCDLDICSQEGLDLQPDHHAPPGPSHSSLTQLLEASFSDMHGTYEGWE
GGSFPCIRVKKSQDSMAKLSVRVSGGEGLGSALGRVGVGLMRDLGSMSFENPCELREKTS
SPFSSNRTMFETEEMVIPADPEGMQQFQSQCVSQCQCVVDVFLPLAYIFLPSKQAFQSIY
NRINNDLLMWEAPPPSGSKSDHSPLHGRQDDDNFQLCKSAFRLDSDSEEEDAQFYTASES
TRRRQSEPRPNHTLSLLSLTIVIGKGRLQAMTDSKGETGSPEDRCHGELLLDLEGGKMFS
VAQHQNNPHLSFLCLESRRVELYHKAVVKDSPVPGRLEMPSFTPPGHLDLTIYPTELGLS
SVSGRETEVQMLSTAIKITLDPQKNVKEFLVALRLHGATMQHRMAQTNHSWHEQLVDFLD
VIDDPILGFTSPVVITVLHTHLATCVVDYRPLYLPLRVLFTAESFSLSSNIIVDTATFHL
RFILDDSALFLSDKCENDVVDLRRDYVCVLDIDLLELAITTWKGSDTGKLSQPLFELRCS
NNVVHLHTCADSCAALVNMLQYLVSQGDVHPPPRHTSPTEIAGQKLPLSESPASLPPCPP
AETAEINQYDLLDALIDTERSHPDEDIDSGSPTIPRGSPVSVYLFPGEAPKLRPPVVIEG
EESKLDRLVATAAEVKVDMMSEEGSDGSEDNEDFCILEAPGMGIPPRDGEPLVTVLAEGS
IRVREGHFSRPRGSSDLLRAPSRFPVPESRVVLREVSVVWHLYGGRDFGGKAMSTHTQHG
NRGRSAPSGMRGSPSRSTAPSRPQNSWRWVGGGGREHNLLMEIQLTKVSFQHESYPVVVS
AAGPALEGEGPGVGAVGEQPLSRQVFIVQELEVRDRLASSQLNKFLYLYTSESMPRRTHS
NMLTVKALQVCPDSGVGGPECCLRVSLLPLRLNIDQDALFFLKDFFSSLAAGVNPYLPVD
LAAEMKTDPSQKPAEDGVSGTETTAGLGPDLTASVETTYSEQSSSSAGSTSSTDQPIYFR
EFRFTSEVPIWLDYQGKHVVIEQGTFAGILIGLAQLNCSELKLKRLCCRHGLLGVDKVIQ
YAVTEWLTDIRKNQLPGILGGLGPMHSVVQLFHGVRDLFWMPIEQYRRDGRIIRGLQRGA
ASFGTSTASAALELSNRLVQAIQATAETVYDILSPTPPVNRYITEGRPPSNRPRRAHQPA
DLREGVAKAYDTVREGMMDTAQTLCDVASRGHEQKGLPGAVGGVLRQIPPTVVRPLIVAS
EATSNLLGGIRNQIKPDARKEDFLKWRSEEGQD
NT seq
6042 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgctggcttttcccctggtcaggctcaatcaagaagcgggcctgtcggtacctc
ttacagcattacctcggtcacttctttcaagaacgactgagtttggaacagctgagtttg
gacctgtacaatggtagtggtgtcatcaaagaaatcaacatcgatgtttgggcagtcaac
gagctcttggagtctcttggggctccacttgagattgtggatgggtttgtgagcagcata
gaggtgacaattccctggtcagctcttgtcactgaccactgcaccctcgtcatctcaggc
cttcagataacatgcagacccaagtacaggaccagtgggggtttggactcccagggctgg
tccacatgcatgacctccagcatgcagctggcccaggagtgcctaaaggacccccctgag
gtgtccgaggagccgcccgctccactggagggcttggagatgtttgcacaaactattgag
actgtcctgcgtcggataaaagtcaccctcctggacaccatcatccgaatcgagcaccag
cccctggacatggagacgggcattgccttagaggtgcacatcaaacggctggagtactgt
gacgaggcggtaaaggaccccagccagacggtgcctgtggacatccaccagccccctgcc
ttcctgcacaagatcctccagctcagctctgttcaactgctgtacgagaccaccggaggg
ccccagggtcctttaagagctgacacccctggctcagcctcagccagtgacgaggaagtt
gagggggaggacaatgaccctccagccacccccacctccctccctctgaccacccagcgg
cccctcctcatcggcagctgctctggcttcatggagaccacggtcaagatcaaacagaac
gacatgctgcctggacctaagttggagctggatgggaaggtgggctgcctccacctgctg
ctctctccagaccagatcactcacctgaccgaccttctgtctgccctctgcatcgacaca
gagcctgaagccagtggtgctggggttcacagccgtcccctggactctgaggacctgcgt
ctgatagaggaggacttgagcaaacagttgagctccagccccggagatggagatccggac
tgggatgaagagcccgacatggagccctacctcaccggtctggagaacggggatatgttc
ttctccatgggtcctggtatgactagcagtgtgacgtcagcgctctctggcagctctctc
tccgacagcatggcgtcgtctacacacagccaggctagctatgcccagggccttccacag
ggtcccaggcgttatcctgtaccaggatcactatccagcctgccccagtgtaaccgaata
ccagcctctcctcgtccagggcgacgtagccaatctgagcccctgaaaccagaggcattg
ctccgcctctcgcttggcgggctcaccctaaccctactggagcaggaaccataccccggg
ccggacggagtgtcctcattgacccaggtgtctcaggtgttcttccgggagctggccttc
ttcaaagacagcatgttcagcgagagagacttccaccacctcagagctagcttcgctaaa
gcctgcccccactcacacctcaggatgactggagcagcggtacaggtggcgtgtgagatg
cgcagtgcaggtcgccactcccgtgctgtgacctctgacctatccttcagtaggctagag
ctgcttgagtgtctctgggagccaggaaagccccaatacactgagttgctccagttccag
catgctgggatgttcacagtggggggagctacagccagaccgtgtgcacagctacactac
agtctcacagagaaacacctgcgcaaggggaggcagcgtgtggtgcgtagagacagtgta
gtgagggtagagttgggagagctgagtgctgagttggacctggacatactgagtcgactg
gagcctctgagcagagcctgcagccactgtcccacacagacaggaggaggacccgtccac
acacagacccagagcagagagctgcactcctctctctccctcctctcgccccacgccatc
ctcaagctccgcttccccatcccggacctccggccgctccccttccgacgccctccttcc
cagagagccgtgcggcaggagaccctggtactggagctgtgtgacctggacatctgctcc
caggagggccttgacctccagccagatcaccatgcaccccctggcccctcccacagctcc
ctcacacagctattggaggccagtttcagtgacatgcacggaacgtatgagggctgggag
ggaggctccttcccctgtatcagagtcaagaagagtcaagactccatggccaagctgtca
gtgcgtgtgagtggaggagagggtctggggtcagcgttggggagggtaggggtgggtctg
atgagggacctggggtccatgtcgtttgagaacccctgtgaactccgagagaagaccagc
tctcccttctcctccaaccgcaccatgttcgagactgaggagatggtaatcccagcagac
ccagaggggatgcaacagttccagtctcagtgtgtgtctcagtgtcagtgtgtagtagac
gtctttctgcccctggcctacatcttcctgcccagcaaacaggccttccagagcatctac
aacaggatcaataatgacctgttaatgtgggaagcccctcccccctcgggttctaagagc
gaccacagccccctacacggtcgccaagacgatgacaacttccagctttgcaagtctgcc
ttcagactagactcggactccgaggaggaagatgctcagttctacacagccagtgaatca
accagacgcaggcagtcagagccccgccctaaccacaccctcagcctgctctctctcacc
attgtcataggaaagggccgcctccaagcaatgacagacagcaagggagagacgggaagt
ccggaggaccggtgtcacggtgagctcctattggacctagaaggggggaagatgttcagc
gtggcgcagcatcaaaacaacccccatctcagcttcctgtgcctggagagcaggagggtg
gagctctaccacaaagctgtagtgaaggactcccctgtccccgggcggttggaaatgccc
agcttcactcccccagggcatctagaccttaccatttaccccacagagttggggctgagc
agtgtgagtggcagggagactgaggtccagatgttatccacagccatcaaaatcaccctg
gaccctcagaagaacgtcaaggagtttctggttgcccttcgtctccatggcgccactatg
caacatcgcatggcacagaccaatcacagctggcacgaacagctggttgattttttggat
gtcattgatgacccgatcctgggctttacgtctcctgtagttattaccgtcctacacaca
cacctggcaacctgcgtcgtggactacaggcccctgtatcttccattgagagtgttgttc
acagcagaatccttctctctctccagtaacatcatagtagacactgccacctttcacctc
aggtttatcctggatgattctgccttgtttctctctgataagtgtgaaaatgacgtagtg
gacctgagacgagactatgtgtgtgttctggacattgatctgctggagctggccatcacc
acatggaaaggcagtgatacagggaaactgtcccaacctctgtttgagctgcgttgctcc
aacaacgtggtccacctccacacctgtgctgactcctgtgctgccctggtcaacatgctg
cagtacctggtgtcccagggagacgtgcacccgcccccccgacacacatcacctactgag
atcgctggacagaagctgccgttgtcagaaagtcccgcctccttgccaccctgccctcca
gctgagactgctgagatcaaccagtatgatctccttgatgctttgattgacacagagagg
agccatccagatgaggatattgactcaggatctcccactatccctcggggctcaccggtc
tccgtctacctgtttcctggggaggcccctaagctccgcccaccagttgtcattgagggg
gaggagtcaaagcttgacagactggtggcgacagccgctgaggtgaaggtggatatgatg
tcagaggagggctctgatggttcagaggacaatgaggacttctgtatcctagaggctcct
gggatgggtatacctcccagagatggagagcctcttgtgacggtgctagctgagggttct
atcagggtgagggagggccacttctcccggccgcggggcagctctgacctgctgcgggcc
cccagccgcttccctgtccccgagagcagggtggtgctacgagaggtgtctgtcgtctgg
catctgtatggagggagagacttcgggggcaaggccatgtctacacacacgcagcatgga
aacaggggtcgctctgccccctctgggatgcgtggatccccatcccgctccactgctccg
tcccggcctcagaactcgtggcgctgggttggaggcggtggacgtgaacacaacttgctc
atggagatccagctcaccaaggtgagcttccaacacgagtcctacccagtggtggtgtct
gcggctgggccggctctggagggagaggggcctggggtcggggctgtgggggagcagcct
ctgtcccgccaggtgttcattgttcaggagctggaggtacgcgaccgcctggcctcgtcc
cagcttaacaagttcctctacctgtacaccagcgagagcatgccccgcaggacacactcc
aacatgttaacagtgaaggccctgcaggtgtgtccagactctggtgtaggtggtccagag
tgttgtttaagagtgagcctcctccccctccgactcaacatcgaccaggatgccttgttc
ttcctgaaggatttcttcagtagtctggctgctggagttaacccctacctgcctgtggac
cttgcagctgagatgaagacagacccttcccagaaacccgctgaggatggggtcagtggc
acggagaccactgctggtctgggtcctgacctcaccgcttctgtagaaaccacctatagc
gagcagagctcctcgtccgctggctccacctcttccactgatcagccaatctacttccgg
gagttccgtttcacctctgaagtgcctatctggctggactaccagggcaagcatgtggtc
attgagcaggggacgtttgctgggattcttattggtctggcccagctgaactgctctgag
ctgaagctgaagagactctgctgccgacacggacttctaggcgtagataaggtgattcag
tacgctgtcactgagtggctgacagacatcaggaagaaccagctgccgggcattctggga
ggtctaggccccatgcactctgtagttcagctgttccatggagtgagggacttattctgg
atgcccatagagcagtacaggcgggacggccgtattatccggggtctccagcggggggcc
gcgtcctttggcacctccactgcctctgctgctctggagctcagcaacagactggtgcag
gctatacaggccacagcggagacggtgtacgacatcctgtccccaacgccccccgtgaac
cgttacatcacagagggccgaccgccctccaaccgtccccgccgcgcccaccagcctgcc
gacctcagagagggcgtagctaaggcctatgacactgtcagagaaggtatgatggacaca
gctcagacactatgtgatgtggcatctcgcgggcatgagcagaaaggtctgcctggtgct
gtgggtggagtcctgcggcagatcccgcccaccgtggtccgtcccctaatagtggcctct
gaggcaacgtccaacctactggggggcatccggaaccagatcaagccagatgcacggaag
gaggacttcttaaaatggcgctctgaagaaggccaagattga
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integrated database retrieval system
