Salmo trutta (river trout): 115205579
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Entry
115205579 CDS
T08542
Name
(RefSeq) pre-mRNA-processing factor 39-like
KO
K13217
pre-mRNA-processing factor 39
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
stru03041
]
115205579
Spliceosome [BR:
stru03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
115205579
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
TPR_14
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
TPR_19
TPR_12
TPR_16
TPR_MalT
HrpB1_HrpK
UTP6_C
Motif
Other DBs
NCBI-GeneID:
115205579
NCBI-ProteinID:
XP_029627574
Ensembl:
ENSSTUG00000037045
UniProt:
A0A674CLJ6
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All DBs
Position
13:complement(27793057..27799482)
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AA seq
721 aa
AA seq
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MAAEGSDLEDLSSNGLMEGPSAPEATEAVQPPTEMEEVSEGNGGEEASEAAAATAYNMPL
VENEEEEDGELPADFDRLWKLAHDNPQDFSSWTDLLQYSEQESHMTASRRALVAFLARYP
LCYGYWKKFADLERRAGYTNKAQEVCVQGLKAIPLSVDLWIHYINLLLGTLNMNLPESSH
CIRSAFEEAVAAAGLDFHSDRLWELYIEWEKEQGDMKAATGVYDRILRVPTQLYSSHYEK
FKTHLNAHAPKDVLSAEEYEGLLEESKQIHKTEKAELAEGEDELPPGEEKEPTEEEVIPK
MRELLLARREKVYQDLEGEVRKRWNFEEAIKRPYFHVKPLDRTQLKAWHSYLDWELTQLG
GGDEKEVETEPDTMEGQEEEQKEGSKSSGIIAGGDRRVRILFERCLIACALYEEFWTKYV
QYLEPQSLYEARGVFRRACEIHLAHKHTMHLQWATFEERHGDLTEARRVLESLETSIPGL
AMVRLRRAGLERRAGRLDESEALLRDAVVQAKETPHLHAFYSIKLARLLLKLCKNPSKAR
GVLQEALEISPDNGKLHLNLLELEVSGDPRGSPEGVQQCVTRALAAPLSPRTKILFSQRG
LQYAEDYGTSVQSVLTVYEEHQKLLKELGNKKRRAENGDGEDPEKMSKGEDGSAVPAPPP
APPTMPHVPMTTPPPPMMGGDMSAAHAGYAGYGSWYQQPQYGGYGGYQQPWNYNQGYYPP
S
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgaaggctcggatttagaagacctgagcagcaacgggctaatggagggtcct
tcggctccggaagccacggaggctgtccaacctccaacagagatggaagaggtatcagag
gggaatggtggagaagaggcttcagaagcagcagctgcgacagcatacaacatgcctctg
gtggagaatgaggaggaagaggacggagagttgccggcggactttgaccgactctggaag
ctggcccatgacaatccacaggacttctccagctggactgacctgctgcagtacagtgag
caagagagtcacatgacagcatcacgtcgagcgctagttgcctttctggcgcgttacccc
ctgtgctacggatattggaagaagtttgccgacttggagcgacgtgcaggctacaccaac
aaagctcaggaggtgtgtgttcagggtctgaaggccatccctctgagtgtagatctgtgg
atccactacattaacctgctactgggcacactcaacatgaacctgccagagtcctctcac
tgcattcgcagtgcatttgaagaggcggtggcagcggcaggactagacttccactctgac
cgtctgtgggagctgtacatcgagtgggagaaggagcagggagacatgaaggctgccact
ggagtctacgacagaatcctcagagtccccactcagctgtacagcagccactatgagaaa
ttcaagactcatcttaatgctcatgcccccaaggacgtcctctcagcagaggagtatgag
gggttgcttgaagaatctaaacagatccacaagactgagaaggctgagctggctgagggg
gaagatgagttaccacctggggaagagaaggaacctacagaggaagaggtgattccgaag
atgcgagaactcctattggctcgcagggagaaggtgtaccaggacctggagggagaggtc
aggaagaggtggaactttgaggaagctatcaagcgtccttatttccacgtgaagcctctg
gaccggacccagctgaaagcctggcactcctacctggactgggagctcacccagctggga
gggggggatgaaaaggaggtggagaccgaaccagacaccatggagggccaggaagaggag
caaaaagaggggtcaaagagcagtgggatcattgccgggggtgaccggagggtacggatc
ctgtttgagcgctgtctgattgcctgcgctctctacgaggagttctggaccaagtatgtt
cagtacctggaacctcagagtctgtacgaggcacgaggagtgttcaggcgagcctgtgag
atccacctggcccacaaacacaccatgcacctgcagtgggccaccttcgaggagaggcat
ggtgatctaacagaggcacggcgtgttctagaatctctggaaacctctatcccaggattg
gccatggtccggctgcgcagggcggggctagagagacgggcgggccggctagatgaatca
gaagctctgctcagggacgcggtggtccaagccaaagagactcctcacctccatgcattc
tactccatcaaactggcccggctgttgctgaagctttgcaagaaccccagcaaggcccgg
ggagtcctgcaggaggcactggagattagcccggataacggtaagctgcacctgaacctg
ctggagctggaggtgtctggtgaccccagagggtcacccgagggggtgcagcagtgtgtg
actcgggcgctggccgcacccctctccccacggaccaagattctcttttcccagaggggc
ctgcagtacgctgaggactatgggacttctgtgcaaagtgtgctaacagtctatgaagag
catcagaagctgctgaaagagctcggcaacaagaagagaagggctgagaatggagacggc
gaggacccagaaaagatgagtaaaggagaagatggctccgctgtgcccgctccaccaccg
gcccctcccacaatgccccatgttcccatgacgacaccacctccacccatgatgggtggg
gacatgagtgcggctcatgcaggctacgcaggctatggaagctggtatcagcaaccacag
tacgggggatacggaggctaccagcaaccctggaactacaatcagggttactaccctccc
agctaa
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