Salmo trutta (river trout): 115205612
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Entry
115205612 CDS
T08542
Name
(RefSeq) cytoplasmic FMR1-interacting protein 2-like
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
stru
Salmo trutta (river trout)
Pathway
stru04810
Regulation of actin cytoskeleton
stru05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
115205612
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
115205612
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stru03019
]
115205612
Messenger RNA biogenesis [BR:
stru03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
115205612
Factors involved in mRNA localization
Other mRNA localization factors
115205612
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
Cypovirus_WIV_4
zf-CW
Spore_SspJ
Motif
Other DBs
NCBI-GeneID:
115205612
NCBI-ProteinID:
XP_029627637
LinkDB
All DBs
Position
13:28759964..28808680
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AA seq
1253 aa
AA seq
DB search
MTTHVTLEDALSNVDLLEELPLPDQQPCIEPPPSSIMYQANFDTNFEDRNAFVTGIARYI
EQATVHSSMNEMLEEGHEYAVMLYTWRSCSRAIPQVKCNEQPNRVEIYEKTVEVLEPEVT
KLMKFMYFQRKAIERFCGEVKRLCHAERRKDFVSEAYLLTLGKFINMFAVLDELKNMKCS
VKNDHSAYKRAAQFLRKMADPQSIQESQNLSMFLANHNRITQCLQQQLEVIPGYEELLAD
IVNISVDYYENKMYLTPSEKHMLLKVMGFGLYLMDGNVSNIYKLDAKKRINLGKIDKFFK
LQVVPLFGDMQIELSRYIETSAHYEENKSKWTCTQSSISPQYNLCEQMVQIRDDHIRFIS
ELARYSNSEVVTGSGLDSHKSDEEYRELFDLALRGLQLLSKWSTHVMEVYSWKLVHPTDK
FCNKDCPGTAEEYERATRYNYTSEEKFALVEVIAMIKGLQVLMGRMESVFNQAIRNTIYA
ALQDFAQMTLREPLRQAVRKKKNVLISVLQAIRKTICDWEGAREPPNDPCLRGEKDPKGG
FDIKVPRRAVGPSSTQLYMVRTMLESLIADKSGSKKTLRSSLDGPIVLAIEDFHKHSFFF
THLLNFSEALQHCCDLSQLWFREFFLELTMGRRIQFPIEMSMPWILTDHILETKEPSMME
YVLYPLDLYNDSGYYALTKFKKQFLYDEIEAEVNLCFDQFVYKLADQIFAYYKAMSGSVL
LDKRFRAECKNYGVIIPYPPSNRYETLLKQRHVQLLGRSIDLNRLVTQRISAAMYKSLDQ
AISRFESEDLTSIVELEWLMDINRLTHRLLSKHMTLDSFDAMFREANHNVSAPYGRITLH
VFWELNFDFLPNYCYNGSTNRFVRTAIPFTQEPQRDKPANVQPYYLYGSKPLNIAYSHIY
SSYRNFVGPPHFKTICRLLGYQGIAVVMEELLKIVKSLLQGTILQYVKTLIEVMPKICRL
PRHEYGSPGILEFFHHQLKDIIEYAELKTDVFQSLREVGNAILFCLLIEQALVSQEEVCD
LLHAAPFQNILPRVYIKEGERLEVRMKRLEAKYAPLHLVPLIERLGTPQQIAIAREGDLL
TKERLCCGLSMFEVILTRIRSFLQDAVWRGPPPTNGVMHVDECMEFHRLWSAMQFVYCIP
VGTHEFTAEQCFGDGLNWAGCSIIVLLGQQRRFDLFDFCYHLLKVQRQDGKDEIIKNVPL
KKMADRIRKYQILNNEIFAILNKYMKAVETDSSTVEHVRCFQPPIHQSLATTC
NT seq
3762 nt
NT seq
+upstream
nt +downstream
nt
atgacgacccacgtgaccctggaggatgctctgtctaacgtggatctgttggaggagctg
cccctccctgaccagcagccctgcattgaacctccgccctcatccatcatgtaccaggct
aactttgataccaactttgaggacaggaatgcgtttgtgacggggatagctcgctacatc
gagcaggcaactgtccactctagcatgaatgagatgctggaggagggccatgagtacgct
gtcatgctctacacctggagaagctgctcaagagctataccacaggtgaagtgtaatgag
cagcccaacagggtggagatctatgagaagactgtggaggtgctggaaccagaggtcacc
aagctcatgaagttcatgtactttcagcgtaaggccatcgagcgtttctgtggggaggtg
aagcgtctgtgccacgctgagcggaggaaagactttgtctctgaagcttacctcctcacc
ctgggcaagttcatcaacatgttcgctgtgctcgacgaactcaagaatatgaagtgcagc
gtcaagaacgaccactctgcctataaaagggcggctcagttcctgaggaagatggccgac
cctcagtccatccaggagtcacagaacctctctatgttcctagccaatcacaacaggatt
actcagtgtctgcagcagcagttggaggtgattcctggctatgaggagttgttagcagac
attgtcaacatcagtgttgattactatgagaacaagatgtacctgacgcccagcgagaaa
cacatgctgctgaaggtgatgggtttcggtctctatctgatggacggtaacgtcagtaac
atctacaaactagacgccaagaagaggatcaacctgggaaagatcgacaagttcttcaag
ctgcaggtggtgcctctgtttggagacatgcagatagaactatcacgttacatagagacc
agcgcccactacgaggagaacaagtccaagtggacatgtacccagagctccatctctccc
cagtacaacctgtgtgagcagatggttcagattcgtgacgaccacatccggttcatctct
gagctggctcgctacagtaacagtgaggtagtgaccggctcaggcctggacagtcataag
tcagacgaggagtacagggaactgtttgacctggcactcagagggttacagctgctgtcc
aagtggagcacacacgtcatggaagtgtactcgtggaagttggtccacccaacagataag
ttctgtaacaaggactgtcctggcacagcggaggagtatgagagagctacacgttacaac
tacacctcagaggagaagtttgccctggtcgaggtcatcgccatgatcaagggactgcag
gtgttgatgggtcgtatggagagcgtattcaaccaggccataaggaacaccatctatgca
gccctgcaggactttgcccagatgaccctcagagagcctctacgtcaggccgtacgcaag
aagaagaacgttctcatcagtgtcctgcaggcgatccgtaagaccatctgtgactgggag
ggggctcgggagcctcccaatgacccctgtctcaggggggagaaggaccccaagggaggg
ttcgacatcaaggtgccccgcagagctgtgggaccttcgagcacacagctgtacatggtt
cgtaccatgctggagtcgttgatagccgataagagtggttctaagaagactctacgcagc
agtctggatggacccatagtactggctatagaagacttccacaaacactccttcttcttc
acacacctgctcaacttcagcgaggcgctgcagcactgctgtgacctgtctcagctgtgg
ttcagagagttcttcctggagctgaccatgggtcgcaggatacagttccccatcgaaatg
tccatgccctggatcctcacagaccacatactggagaccaaggagccatccatgatggag
tatgtgttgtaccctctggacctctacaatgacagtggctactacgctctgaccaagttc
aagaaacagttcctctacgatgagatagaggctgaggtgaacctgtgctttgatcagttt
gtctacaagctggctgaccagatatttgcctactacaaagccatgtctggaagtgtcctc
ctggacaagcgtttcagggcggagtgtaaaaactatggtgtgatcatcccctaccccccc
tccaatcgttatgagaccctgctcaaacagagacatgtacagctcctgggtcgctccatt
gatctgaaccgtctggtcacccagaggatctcagcagccatgtacaagtctctggaccag
gccatcagccgctttgagagtgaagacctcacctccatagtggagttggagtggttgatg
gacatcaacagactgactcatcgtctgctctccaagcacatgaccctggacagcttcgac
gccatgttccgcgaggccaaccacaatgtgtccgctccctacggacgcatcacgctccat
gtcttctgggaactcaactttgacttcctccccaactactgctacaacggctccaccaac
cgcttcgttcggactgccatcccctttacccaggagcctcagcgagacaagccggccaac
gtgcagccgtactacctgtatgggtctaagcctctgaacattgcctactcacacatctat
agctcctacaggaacttcgtaggcccgccccacttcaagaccatctgccgtctccttggt
taccaggggattgccgtggtgatggaggaactgctcaagatagtcaagagcctgttgcaa
ggcactatcctgcagtatgtgaagactctgatcgaggtcatgcccaagatctgtcgcctg
ccgcgccacgagtacggatccccaggtatcctggagttcttccaccaccagctgaaggac
attatagagtacgcagagctgaagacggatgtcttccagagtctcagggaggtggggaac
gccatcctcttctgtctgctcatcgaacaagctctggtgtcccaggaggaggtgtgtgac
ctgcttcatgcagcccccttccagaacatcctccccagggtctacatcaaagagggggag
cgtctggaagtcaggatgaagaggctggaggctaagtatgctccactccatctggtgccc
ctcattgagaggctggggacccctcagcaaatagctatagcccgtgagggggatctgttg
accaaggagcgtctttgttgtggcctgtccatgttcgaggtgatccttacgaggatccgt
agtttcctacaggacgccgtgtggcgaggcccaccccccaccaacggcgtgatgcacgtg
gacgagtgtatggagttccaccgcctctggagtgccatgcagtttgtttactgcatcccc
gtcggcactcatgagttcaccgccgagcagtgttttggtgacgggctgaactgggcaggc
tgctccatcatcgtgctgttgggtcagcagcgccgcttcgacctgtttgacttctgctac
cacctgctcaaggtgcagaggcaggatggcaaggatgagatcatcaagaacgtgccgctg
aagaagatggctgatcggatcaggaagtaccagatcctgaacaatgagatctttgccatc
cttaacaagtacatgaaggctgtggagacggatagttccaccgtggagcatgtccgctgc
ttccagccacctatacaccagtccctggccacaacatgctga
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