Salmo trutta (river trout): 115205623
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Entry
115205623 CDS
T08542
Name
(RefSeq) SH3 domain and tetratricopeptide repeat-containing protein 2-like isoform X1
KO
K24313
SH3 domain and tetratricopeptide repeat-containing protein
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
stru04131
]
115205623
Membrane trafficking [BR:
stru04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
115205623
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
TPR_1
SH3_9
TPR_2
TPR_8
SH3_1
SH3_2
TPR_MalT
TPR_10
Motif
Other DBs
NCBI-GeneID:
115205623
NCBI-ProteinID:
XP_029627652
Ensembl:
ENSSTUG00000045662
LinkDB
All DBs
Position
13:30604856..30658222
Genome browser
AA seq
1707 aa
AA seq
DB search
MAWCCCTPLRASSSSCCSPLLKRCPLFPDISPAELDALWREPPYTLAGTNEHFTGNDVMN
RGEEEGPGVESGEGEVELDSYWTRKEAFTRGSTVSLAMGERFSSDVVLVFSGRRCSGVIP
DSELQEALRTRLRVVESNSQDVIQLFKDLSARLLSVHAEKDSFVITFKTVEEMWKFSTYL
ALGYVARCLENFLCDQSFWLDTELLRDLEITVTVDEEHLATLYLGLLLQEGSFFAKALVS
SGEHSDEEEELCFRRNDLLMVRDTGQDSHWEGTLLSTGQHGLVPVNTMQPLPYPFYQWFL
RKHSDCAGCSPSERGQFDHPIVTGSCEAVVDHNPVGSDELQLSQGDLIEIEGMLLRGLDL
FIGTHCSTGNTGFVHKAHVKPLNAKPLDGQLVFLSEEERASMAQINPCSSEPRDSGLLER
LFSSDISTVYRLDRLDQSDFTYIRNQPKQEHKPPASARQSIISEKSDATPPYHSSPRPSL
SHSSPRPSFYTSQNALGRGGDGELLSFSLDDTFREMNEFQEDPALFLEEGSWEGVESEVC
DPTLTLLNMHHFQEDFLPLYDLNHSFLWLTFSGQSEDELLGHLEIVREGAKRTGMAWAHR
RACFLLGRLCAKKLKYSQARVYYEEALGVSVDGFSDLPLLIALYTNLTAIYLKQKMADKL
PPTLEKASALLLCLPRHTFTSLDEFELLKLVLRRSVVEGDKHLEARVCYLTASLFLLLRK
IDDALPFVERLQFLTVTLSAEEGRPIAPLDLNWLLSRLYHRKYMPYLALASLSLDSGQDH
SLQDAFHRIELFSRNSVRLNPRWKEGTSLLPAQIVVYLQQALAIAERGEDLKTQRDLCLG
LACVYQQHGALVKALPCAQQAVQTGGGINEEEGFEASVLMGWLLVLTGQPERAQNTLQPL
LQSLQGTDSPTQVGVVHNLLALCLRRQGHIPEAGSHLHHALTISRESGNQRNQALALANL
GCLALGVGAPTLAERFLFRSLWLFLEIWESPVDEEHVQTYLWLGRSYKDRGRSQDVRLCY
EMGLLISLQARNLPSQMVVAKVLSRHYADVLLYGQSILYYEHCVSVSRDLKDKRLEGEYL
EILSSLYLSLNTEKSSRKSLDYSKQSLRISIDLGKREEESETWLQVGRIYYLIHEDELAD
MYLQAAVKTALRMNDPRFAMSIYEEAGDIFFKGHRNRLASLPFYRDGSLPFARSIHDVHS
EFRLLSKLTELLMTQEEHEEALQYAILAVQISTKTGVCVNERAAYHRLATVYYSLEQYEM
TENYYLKSLSLSPAVLQHPLEARYYTKLYCRLGDMTLHKLKDTYDSVGYFQLALAAALED
RGNPQALYVVYMKLAEIHANHMPDPLLCQAYRDRAQSLRRELSGLEEMDGREGETEEWRG
EIEGRGGETEMEGREETEGRREETEEWRGEMEGRGGEMETEGREETEGRGEETEERGGVT
CDTDLETRNTDMETEPETGYSEHTDTIPKEAIDMDSARSLRLEPAGRQDMERGDTEGQHT
GLGDMEMGDTEGQHTGLGDMERGEIEIGHPDTTEKQHPVTENRETETETGCGDSIDAEAN
SKDANCKDSSHTNADSHEADSDVFKGDRETSNSNPEKILPEATHTDQDTDSTDTSPGQAD
VEHTQNDYTTTSSAFVDTTITEDTDSIDRIPCDPNNTETMPTDTCIKHSDSTATDTDTDT
PYKDSPTDSSHTDTDTDIDSSQRQTQR
NT seq
5124 nt
NT seq
+upstream
nt +downstream
nt
atggcgtggtgctgttgcactcctctccgggcctcctcgtcctcctgctgctctccgctt
ctcaaacgctgccctctcttcccagacatctcccctgctgagctggatgcactatggagg
gaaccaccgtacacgctagcgggaaccaatgagcacttcacaggaaatgatgttatgaat
cgaggggaggaggagggtccgggggtggagtctggagaaggggaggtggagctagacagt
tactggacaaggaaggaggcgttcaccagaggaagcaccgtgtcactggccatgggagag
aggttctcctcagacgtggttctagtgttcagcggtcggcggtgctcaggtgtaatacct
gactctgaactacaggaggcgctccgtaccagactcagggtcgtcgagagcaacagtcag
gacgtcatccaactcttcaaggacctgtctgcccgtctgctgtctgtccacgctgagaag
gacagctttgtcatcaccttcaagactgtagaggagatgtggaagttctctacctacctg
gctctgggctatgtggcgcggtgcctggagaatttcctatgtgaccagtcattctggctg
gacactgagctactgagggacctggagatcactgtgactgttgacgaggaacacctggcc
acactctacctgggactgctgctgcaggagggttcgttctttgccaaggcgctggtgagc
agtggtgagcatagtgatgaggaagaggagctgtgtttcagacgtaacgacttgctgatg
gttagagacacggggcaggacagtcactgggagggcacccttctctccaccgggcaacat
ggactagtgcctgtcaacaccatgcagccgctgccataccccttctaccagtggttcctg
aggaagcactctgactgtgccggatgctccccttcagagagaggacaatttgaccaccct
atagtaaccggatcctgtgaggctgtagtggaccacaacccagtaggttctgatgagctc
cagctgagtcaaggtgacctgattgaaatagaggggatgctactccgaggtctggacctg
ttcataggaacacactgctctacaggaaacactggcttcgtacacaaggctcacgtcaag
ccactcaatgccaaaccactagatggacaactggtgtttctgagtgaggaggaacgtgcg
tcaatggcccagattaacccctgcagtagtgaacccagagacagcggcctcctagagaga
ctcttctcctctgacatcagtactgtctacagactagatagactggatcagtctgatttt
acgtacatcagaaaccaaccaaaacaagagcataagccccccgccagcgcccggcaatcc
atcatctcagagaagagtgacgctacacccccctaccactcctccccccgcccctccctc
tctcactcctcgccccgcccctccttctacacctcccagaatgctttggggcgtggcggt
gacggggagttgctgtccttcagtctggacgacaccttcagagagatgaatgagttccag
gaagacccggcccttttcctggaggaggggagctgggagggggtggagtcagaggtctgt
gacccaaccctgactctgctcaacatgcatcacttccaggaggacttcctgcccctctat
gacctaaaccactccttcctgtggctgacgttctcaggacagagtgaggatgagctactg
ggccatctggagattgtcagggagggggccaagagaacgggcatggcctgggcacaccga
cgggcatgcttcctactggggaggctctgcgccaagaagctcaagtactcccaggcccgt
gtgtattacgaggaagcccttggcgtctctgttgacggtttctctgacctccctctcctc
atcgccctgtacaccaacctcacagccatctacctcaaacagaagatggccgacaagctg
cccccgaccctggagaaggccagtgctctgctcctctgtctccccagacacaccttcacc
tccctggatgagtttgagctgctgaagctggtgctgcggaggtctgtggtggaaggggac
aaacacctggaggcacgggtctgctacctcactgccagcctcttcctcctccttagaaag
atagatgacgccctgcccttcgtggagcgtctccagttccttactgttaccctgtctgct
gaggagggacgccccatcgcccccctggacctcaactggctcctgtcccggctctaccac
cgtaaatacatgccctacctggccctggcatcactcagcctggactctggacaggaccac
tcactacaggacgccttccacaggatagaactgttcagcaggaactcggtgcgtctgaat
ccgcgatggaaagaggggacgtcccttctccccgcccagatcgtggtgtatcttcagcag
gctctggccattgcagagcgtggtgaggaccttaagacccagagagacctgtgtctgggc
ttggcctgtgtgtaccagcaacacggcgctctggtgaaggccctgccctgtgcccagcag
gctgtacagaccgggggaggtatcaacgaggaggaggggttcgaggcttcagtactgatg
ggatggttgttagtcctgacgggacagcctgagagggcacagaacaccctacagccacta
ctacagtcactacagggaaccgacagcccgacacaggtgggagtggtccacaacctgctg
gctctgtgtctgcggcggcagggtcacatcccagaggccggcagccacctccatcacgcc
ctcaccatctccagggagagtggcaaccagaggaaccaggccctggccctcgccaacctg
ggctgtctggcactgggcgtgggggcacccacactggcagaacgattcctatttaggtct
ctgtggttgttcctggagatctgggagagtcccgttgacgaggagcacgtccagacctac
ctatggctggggcggagctacaaggacagggggaggagccaggacgtcaggctgtgttat
gagatgggcctcctcatatccctccaggccaggaacctacccagtcagatggtggtggct
aaagtcctgagtcgtcactatgctgacgtgctgctgtatggacagagtatcctctactat
gagcactgtgtgtctgtgtccagggacctgaaggacaagagactagagggagaatatcta
gagatcctcagcagcctctacctctccctcaatactgagaaatcatcaaggaagtctctg
gactacagtaagcagagtttgcgtatctccattgacctggggaagagagaggaagagtca
gagacgtggcttcaggtgggacgcatctactacctcatccatgaagacgaactggctgac
atgtacctacaggcagcggtgaagacagccctgaggatgaatgaccctcgcttcgccatg
agtatctacgaggaggcaggagacatcttcttcaaaggccacaggaacagactggcatca
ctgcccttctacagggacggcagtctcccgtttgctcggagcatccatgacgtccactca
gagttcagactgctgagtaaactgactgaattactgatgacccaggaagagcatgaagag
gctctacagtacgccattctggctgtacagatcagtaccaaaacaggtgtgtgtgtgaac
gagcgcgcagcgtaccaccgcctggctacggtgtactacagtctggagcagtatgagatg
acagagaactactacctcaagtctctgtctctcagccctgctgttctgcagcaccccctg
gaggctagatactacaccaagctctactgcaggctgggggacatgacgctgcacaaatta
aaggatacctatgactcggtgggctacttccagctggctctagctgctgccttggaggac
cgtggcaacccacaggcgctgtatgtggtctacatgaagctggcagagatccatgccaac
cacatgccagacccactgctctgccaggcttacagggacagggcacagagcctgaggagg
gaactctctgggctggaagagatggatgggagggaaggagagacagaggagtggagagga
gagattgagggcagaggaggagaaacagagatggagggaagagaagagacagaggggaga
agagaagagacagaggagtggagaggagagatggagggcagaggaggagagatggagacg
gagggaagagaagagacggaggggagaggagaagagacagaagagagaggaggagtaaca
tgtgatacagacctggagacgagaaacacagacatggagactgagccagagactggatac
agtgagcatacagatactatccccaaagaggctattgacatggacagtgcacgtagcctg
aggttggagcctgctggacgacaggacatggagaggggagacacagagggacaacataca
ggacttggagacatggagatgggagacacagagggacaacatacaggacttggagacatg
gagaggggagagatagagataggacacccagacactacagagaaacagcatccagttacc
gaaaatagagaaacagagactgagactggatgtggtgactctatcgatgcagaagcaaat
tccaaagatgctaactgtaaggatagcagtcacaccaatgcagatagccatgaagccgat
tctgatgtgtttaaaggagacagagaaaccagtaattcaaatccagaaaagatcctccca
gaggctactcacacagaccaagacactgacagtacagacacaagccctggtcaagcagac
gttgaacacacacagaatgactatacaacaacaagcagtgcatttgtagacactacaata
acagaggacactgacagtatagacagaataccttgtgaccctaacaacactgagactatg
ccaacagacacatgcatcaaacatagcgattcaacggccacagacacagatacagacaca
ccctacaaagacagccctacagacagcagtcacacagacacagatacagacatagactca
tctcaaagacagacacagaggtaa
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integrated database retrieval system
