Salmo trutta (river trout): 115205641
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Entry
115205641 CDS
T08542
Name
(RefSeq) cytoplasmic polyadenylation element-binding protein 4-like isoform X1
KO
K02602
cytoplasmic polyadenylation element-binding protein
Organism
stru
Salmo trutta (river trout)
Pathway
stru04114
Oocyte meiosis
stru04914
Progesterone-mediated oocyte maturation
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09140 Cellular Processes
09143 Cell growth and death
04114 Oocyte meiosis
115205641
09150 Organismal Systems
09152 Endocrine system
04914 Progesterone-mediated oocyte maturation
115205641
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stru03019
]
115205641
Messenger RNA biogenesis [BR:
stru03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
115205641
Factors involved in mRNA localization
Trans-acting binding proteins
115205641
mRNA cycle factors
P-body specific factors
115205641
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_7
CEBP_ZZ
RRM_1
zf-U1
Motif
Other DBs
NCBI-GeneID:
115205641
NCBI-ProteinID:
XP_029627684
Ensembl:
ENSSTUG00000046175
LinkDB
All DBs
Position
13:31434094..31447377
Genome browser
AA seq
748 aa
AA seq
DB search
MDDYGFGVLVKNNCSGNKSAFPVRIPPHLQPSHLNHPANPPSPPSFINSTSATNGGGSAW
LFPSVTPHSNMQDEILDSDKAKALDLQEKAQPQALSPGQQEAGGGLGELDGSLPEDCSME
KGSLESSGGKEKLRGGMDSPPVLGGFDYQDSLGMVTSGAQSTTTTSSLTSFNNWSPTVPS
NPSPMVSEDVGSGFFGPAGSNANGPPMLFQNFSHHAGPGFGGVGGSYSPQIGPVSQHHPS
PHPHHYHPHNQGVPPQHRRSPASPHPPQPSFPPHPHRSGAFTQLPHLAPAQSKPPSPWGS
YQSPAPSTPTSTSWSPGVGYGGWGGSQGVREYRRGFNGGVTALNSISPLKKSFPNNQVPS
QKYLRNNSGFNHKAWMEDGMSRTDNFPFQQERTRSFDGFSMHSLENSLIDIMRAEQDSLK
GRYGFSHQGGDVSLPMNARSYGRRRGHSNLFPMGDEHSFGEDESGDQGLPGLGSAHCFPQ
LNGERVERYSRKVFVGGLPPDIDEDEITASFRRFGHLFVDWPHKAESKSYFPPKGYAFLL
FQDETSVQDLIDACIEEDGKLYLCVSSPTIKDKPVQIRPWNLNDSDFVMDGSQPLDPRKT
IFVGGVPRPLRAVELAMIMDRLYGGVCYAGIDTDPELKYPKGAGRVAFSNQQSYIAAISA
RFVQLQHGEMDKRVEVKPYVLDDQLCDECQGTRCGGKFAPFFCANVTCLQYYCEYCWAAI
HSRAGREFHKPLVKEGGDRPRHISFRWN
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atggacgactacggcttcggagtcctggtgaagaataactgcagtggcaacaaatctgct
ttccctgtgaggatccctcctcacctccagccctcccacctcaatcatcccgccaacccc
cccagccccccttcattcatcaatagcacctcggccaccaatggaggaggtagcgcctgg
ctgttcccctccgtaacaccccacagtaacatgcaggatgagatccttgactccgacaag
gccaaagccctggacctgcaggaaaaggcccagccgcaggccctctcccctgggcagcaa
gaggccggaggtggcctaggggagctagatgggtctctacctgaggactgctccatggag
aagggctcattggagagcagcggtgggaaggagaagcttaggggtgggatggactcccct
ccggtgctgggggggtttgactaccaggacagcctggggatggtgacgtctggagcccag
tccaccaccactacctcctccctgacctccttcaacaactggtccccgaccgtaccctcc
aacccctcccccatggtcagtgaggacgttgggagcgggttctttggcccggccggttcc
aatgctaacggacccccaatgcttttccagaacttctcccatcacgccgggcccggcttt
ggaggggtggggggtagttactccccccagattggccctgtctcccagcaccacccttct
ccacacccccaccactaccacccccacaaccagggggtccccccgcagcaccgccgttcc
ccagcctccccccaccctccccagccctccttcccccctcacccccaccgctctggagct
ttcacccagctgccccacctggccccggcccagtcaaagcccccctccccttggggcagc
taccagagccctgccccctccacccccacttccacatcctggagccctggagtgggttac
ggtggctggggagggtcacagggggtccgagagtaccgcaggggcttcaacggaggggtg
acggccctcaactccatctcaccactaaagaagtctttccccaacaaccaggttccctct
cagaagtatcttcgtaacaactctgggttcaaccacaaggcttggatggaagacggcatg
agtcgcactgacaacttccctttccagcaggagagaacccgttcctttgatggcttcagc
atgcactccctggagaacagtctgattgatattatgagggctgaacaggattccttgaaa
ggtcgctatggtttctctcaccagggcggagacgtgtccttgcccatgaatgctaggagc
tatggcagacgacgaggtcactctaacctgttccccatgggggacgagcactccttcgga
gaggacgagtcaggtgaccagggacttcctggtttaggatccgcccactgtttcccgcag
ctcaatggagagcgagtggagaggtattcacgcaaggtgtttgtgggaggactgcccccc
gatatagacgaagatgagatcaccgccagtttccgcaggttcggtcacctgtttgtcgat
tggccccacaaggctgagagcaagtcctatttcccacccaaaggttatgcattcttgctg
ttccaagacgagacctctgtccaggatctgattgatgcctgtatcgaggaggatggcaag
ctctacctctgtgtctccagccccaccatcaaggacaagcctgtccagatccgtccctgg
aacctgaacgacagtgactttgtgatggacggctctcagcctctggaccccaggaagacc
atctttgtagggggggtgccacgtcctctacgcgcagtggagctggccatgataatggat
cgtctgtatggaggagtgtgttacgctggcatcgacacagaccctgagctgaagtaccct
aaaggagcgggccgtgtggcattctccaatcagcagagttacatcgctgctatcagcgct
cgattcgttcagttgcagcacggcgagatggacaaacgggtggaagtgaagccatacgtg
ctggatgaccagctgtgtgatgagtgccaggggacacgctgtgggggaaagttcgctccc
ttcttctgcgctaacgtcacctgtctccagtactactgtgagtactgctgggctgccata
cactcccgggccggacgagagttccacaagccactggtcaaggaggggggagaccggcct
cgacacatatccttcaggtggaactag
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