Salmo trutta (river trout): 115205722
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Entry
115205722 CDS
T08542
Name
(RefSeq) ras GTPase-activating protein-binding protein 1-like
KO
K17265
Ras GTPase-activating protein-binding protein 1 [EC:
5.6.2.5
5.6.2.3
]
Organism
stru
Salmo trutta (river trout)
Pathway
stru04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
115205722
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stru03019
]
115205722
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
stru04147
]
115205722
Enzymes [BR:
stru01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
115205722
5.6.2.5 RNA 5'-3' helicase
115205722
Messenger RNA biogenesis [BR:
stru03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
115205722
Exosome [BR:
stru04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
115205722
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NTF2
RRM_1
RRM_7
NXF_NTF2
Motif
Other DBs
NCBI-GeneID:
115205722
NCBI-ProteinID:
XP_029627849
Ensembl:
ENSSTUG00000021081
UniProt:
A0A673ZSX6
LinkDB
All DBs
Position
13:35489301..35498667
Genome browser
AA seq
487 aa
AA seq
DB search
MVMEKPSAQLVGREFVRQYYTLLNQAPDYLHRFYGKNSSYVHGGLDNNGKPVEAVYGQSE
IHKKVLTLNFRDCHTKIRHVDAHATLNEGVVVQVMGELSNDMQPMRKFMQTFVLAPEGTV
ANKFYVHNDVFRYQDEVFGDSDSEPPEESDEDVEEMEERVPSPEVTQEEAATFYEQTPCT
EPEGLVEEELAVTPEPEPEAEPDPDVVDGKPALEPETQQQQHTTEEQGEKCPVSSPLPSA
TADPAPAPAAEDNRPFSWASVTSKNLPPSGAVPVSGIPPHVVKVPSAPPRLEVKTEAAAQ
RTQPRGDQRPREARPGPPPVNRGPRPGVREGEQGESSEVRRVVRYPDAHQLFVGNVPHDV
DKAELKEFFQQYGTVLELRINSGGKLPNFGFVVFDDFEPVQKILSNRPIKFRGDIRLNVE
EKKTRSAREGDRRDIRPRGPGGPGGPRERIGGPRGPPTRGGMAQKPSFGSGRGTGPSEGG
RYMGPRQ
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atggtgatggagaagccaagtgcccagctcgtcgggcgggagtttgtccgacagtactac
acactactcaaccaggcacccgactacctgcacaggttttatgggaagaactcttcctat
gtacatggaggtctagacaacaatggcaaaccagttgaagcggtctacggacagtcggag
atccataaaaaagtgttgacgctgaactttcgtgactgccacaccaagatcagacatgtg
gacgcccatgcgaccttgaacgagggcgtggtggtgcaagtgatgggggagctgtccaat
gacatgcagcccatgcgcaaattcatgcagacatttgtgctggcccctgagggcactgta
gcaaacaagttctacgttcacaacgatgtattccgttaccaagacgaagtgtttggggat
tctgactcagaaccccctgaagagtctgacgaggatgtggaggagatggaggagagggta
ccatcaccagaggtgacccaggaagaggctgcaaccttctacgaacagacaccatgcact
gagccagaggggctagtggaggaggagttggctgtgaccccagagcctgaacctgaggca
gagccagatccagacgtggtggatggaaaaccggccctggagccagagacccagcagcag
caacacactacagaggagcagggagagaagtgtcctgtctcctcacccctgccctctgcc
actgctgaccctgcccctgcacctgctgctgaagataaccggcctttctcctgggcatct
gtcacaagtaagaaccttccccctagtggagcggtccctgtctcaggcatccccccccac
gtcgtcaaagtcccctcggcaccgcccaggttggaggtgaaaacagaagccgcagcacag
agaacacaaccgagaggagaccagagaccacgggaagcaaggccaggccccccaccagtc
aacagaggaccccgaccaggagtgcgggaaggagagcagggagagtcgtcagaggttcgc
cgtgtggtgagatatccagacgctcaccagctcttcgtaggaaacgtcccccatgatgtg
gacaaggcagagctcaaggagtttttccaacagtatggtactgttcttgagctacggatc
aacagcggcggaaagcttcccaactttggattcgtggtgttcgacgattttgaacctgta
cagaaaatcttaagcaaccggcccattaagttcagaggagacatccgactgaacgtggag
gaaaaaaagacgcgctccgcccgggaaggggaccggcgagacatccgccccagaggtcca
ggtggccccggagggccccgagagaggataggagggcccagaggtccccccaccaggggt
ggcatggcacagaaacccagctttggctctggaagaggcactggacccagcgagggaggt
cgctatatgggacctcgtcagtga
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integrated database retrieval system
