Salmo trutta (river trout): 115205730
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Entry
115205730 CDS
T08542
Name
(RefSeq) matrin-3-like isoform X1
KO
K13213
matrin 3
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
stru03041
]
115205730
Spliceosome [BR:
stru03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
115205730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
Motif
Other DBs
NCBI-GeneID:
115205730
NCBI-ProteinID:
XP_029627860
Ensembl:
ENSSTUG00000021738
UniProt:
A0A673ZZI8
LinkDB
All DBs
Position
13:36039995..36053743
Genome browser
AA seq
1187 aa
AA seq
DB search
MSQKIPSDSSQKGFAVGRGLLAAAETLNFSMNEQRSDSLHHGSTSRQLHSMSSGMGGGEG
DRDPQLSRRGGGSHIGNSMKLFASLGLSPADLDMLAQIPEDNISVETLPHLIMQLKNRKV
ESDRRMAGNSRGDLSGLSSETSYRASRDDWDDMRVGKLGGSMGQASAHAQQGDLGYSSIQ
DTSAGRYELDYGHGSGGRNPGWYSDLSHDRYSGMGMGPPSAADSVFMTRRMGSPSQGKVQ
DFLGVIPHMFPHVCSLCDFDVHSTMEWNQHTDGLRHTENQRLLLQMYPEWDPHMATSRSS
GSHLLETTNQSAGLLGPIPMAERQQAGGGRMNSGWGGGTGSNVGSGKPHQHSMALKQIRS
KVVVAKYDRSPLSNKALFALVEPFGTLCEHLVLKNKAFLEMETHKEARDVVSYYQQNPAV
LYGKQITCYLSKELMVIQKDSRTERINREAKQGKEPAAANQSQVVFFSNLPRENEKKQEL
LTIARRFGTVEKHLFLTDESFVQLGSAEDAEMLVKYYTLNPLTIQGKSVRLNICTKYKTL
NVSNRSNKLMDDKRRRSSSSTGPKDKGSSSRSTKSSSNSKAKEDKKEPPKGEDSGAEGEG
SGGEGSGRGDEVAGVMEGDEAEEWKGEGDQGSRDDGPSEDKAEAVTEDPETAANTSLESQ
EEKEPAPDSDNVPSTAKVLSSSHVTEKAEGSEVEEGTVPGPEEKAEGEPESEQMETEATT
DEPETEDKDDMPSAEPAESLEMHEEQLPADQEEGSMEQDFPENMDDFVTLDELAEDEDLE
RQDSSSKEKYSSSGSSKKIGGLRVVNVVGFKRAYGFLNEILALAKPFGTVVQHLVLDVRP
EAFLQLNSEEEAKAMVNFYSGNVTPTVCGKSVKIYHSQTYATIQSGRVVYVGQIPHFKSS
DASLLKIAEPFGKVRRYFLNRSRNECFIEMERGEDAERMSETYKDTPPKFEGKRLTVYVS
RKYKQLKYGHRPPAPDSEEKKRPSKRERSGSETSSHRSSAAKSSAKQDEEPPVKKSREET
ASSSADEPEKEDKEEMVEMLTEQSEVEVRKEEDVVQGEHSQPSETSAVHKIDTDMNIKME
ENETAISIVNVRSVEENGETASTPSQAEGKLSSTSPVPLGPYEPNNPVGVEYVKMGYYCR
VCFLFYSNEETAKKVHCSSQSHYQKLKKHLEKEKAKAQSTTGTKTPV
NT seq
3564 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagaagattccatctgatagctctcagaaaggctttgctgtgggacgcgggctc
ctggctgctgctgagaccctcaacttcagcatgaatgaacagcgttcagacagtctccat
catggctcaacctccagacagttgcacagcatgtcctcgggtatgggtggtggtgagggt
gaccgtgacccgcagctgtcccgtcgtggtggcggcagccacattggcaactccatgaag
ctgtttgccagcttgggcctgtcgcccgctgacctagacatgctggcacagatcccagaa
gacaacattagtgtggagaccttgcctcaccttataatgcagcttaagaaccggaaggtg
gagtctgacagacgcatggcaggcaactctagaggggacctgtccggcctctcctctgag
acctcatacagagccagcagagacgactgggatgacatgcgtgttggcaaactgggtggt
tccatggggcaagcgtcggcccacgctcagcaaggagacttgggctacagttccatccaa
gacacttcagctggaaggtacgaacttgactatggccacggcagtggtggaagaaatcca
ggctggtattcagatctttcccatgatcgctacagcggtatgggcatgggtcccccctca
gcggcagatagtgtctttatgaccaggagaatgggttccccgtcccaaggcaaagtgcag
gacttcttaggagttatacctcacatgtttccccatgtgtgctctctttgtgactttgac
gtgcattctaccatggagtggaaccagcacacggatggattacggcatacagaaaaccag
aggctcctcctgcaaatgtacccagaatgggatccacacatggccacaagcagaagcagt
gggtctcatctactggagaccaccaatcaatcagccggtctcctgggaccaatccccatg
gctgaaaggcagcaggctggaggagggcgcatgaactccggctgggggggtggtactgga
tctaatgttggatcaggcaagccacatcaacactctatggcacttaagcagatcagaagc
aaagtagtggtggctaaatatgacaggagtcctctgtctaacaaagccctgttcgccctg
gttgaaccctttggaactctctgtgaacacctggtactgaagaacaaggcctttttagaa
atggagacccataaggaagctagggatgtggtgagctactaccagcagaacccagcggtg
ttgtatgggaaacaaatcacttgttatctgtccaaggaactcatggtgattcagaaagac
agcagaactgagagaatcaaccgggaggcgaaacaaggcaaagagccagcggcagcgaac
caatcgcaggtagtcttcttctccaacttgccgcgtgagaatgagaagaagcaggaactc
ctcaccatcgcacggcgcttcggaaccgtggagaaacacttgtttctaacagatgagtct
tttgttcagctggggtctgcagaggatgctgagatgttggtgaagtactacactctgaat
ccactgaccatccagggaaagagtgtccgcttaaacatctgtaccaagtacaagacctta
aatgtgagtaatcgctccaataaactgatggatgacaagagaaggagaagcagcagtagt
actgggcccaaagacaaaggttcctcctccaggagcactaaatcttcctctaacagcaaa
gccaaagaggacaagaaggaaccaccaaaaggagaggacagcggtgcagagggagaaggg
tcagggggagaggggtcagggagaggtgacgaggtggctggtgtgatggagggagatgaa
gctgaggagtggaaaggagagggagaccagggttcacgtgatgatgggccgtcagaggac
aaggctgaagccgtgacggaagaccccgagaccgctgccaacaccagtctggaatcccag
gaggagaaggaacctgctccggactctgacaatgttccgagcactgcaaaggttctgagc
agtagtcatgtcaccgagaaggctgaggggtcagaggtggaggaggggactgtccctggt
ccagaggagaaagcagagggagagcctgagagtgaacagatggaaactgaagccactaca
gatgagccagaaaccgaggacaaggatgacatgccgtcggcagagccagcagagagctta
gagatgcatgaggaacaactacctgcagatcaggaggagggcagcatggagcaggatttc
ccagagaacatggatgactttgtgactctggatgagctggcagaagacgaggacttggag
agacaggactcctcatccaaagaaaaatactcatcttcaggaagctctaagaaaattggg
ggattgagagtggtcaacgttgtgggatttaaacgagcctatggttttctgaacgagatc
ttggccctggccaaacccttcggtacagtagttcagcacctggtgcttgacgtgagacct
gaggcctttctgcaactcaattcggaagaagaggcaaaagcaatggtcaatttctacagt
gggaatgtaacaccaactgtgtgtgggaaatctgtgaaaatctaccattcacagacatac
gctaccattcagagtgggagagtggtatacgtgggacagattccacacttcaaatcctca
gacgcctctcttctgaaaattgctgaaccgttcggcaaagtgagacgctattttctaaac
agatctcgcaacgagtgtttcattgagatggaacgtggagaggacgctgagagaatgtct
gagacctacaaggacacaccccctaaatttgaaggcaagcgactaacggtgtacgttagc
aggaagtacaaacagctcaaatacggacaccgaccaccagcccctgactctgaggagaag
aagaggccgtcaaagagggagcgatcaggcagtgaaacaagctcccacaggagctcagca
gccaaaagctcagccaagcaggatgaagaacctccagtcaagaagtccagagaggagacg
gcatcctcctcagcagacgagcctgagaaagaagacaaggaggagatggtggagatgctc
actgagcagagtgaggtagaggttaggaaggaagaggacgtggtccagggagaacacagt
caaccctctgagacctcagctgtacacaagattgacactgacatgaacatcaaaatggag
gaaaacgagactgccatttccatagtgaatgtgaggagcgttgaggagaatggcgagact
gctagcacaccatcccaggctgaggggaagctttcatcaaccagtcctgttcctctgggg
ccttatgagcctaacaacccagtgggtgttgaatatgtgaagatggggtactattgtaga
gtctgtttcctgttctattccaatgaggagacagccaagaaggttcactgcagcagtcaa
tctcactaccaaaaactcaagaaacatctggaaaaggagaaggccaaagctcaaagtacc
acagggacaaagactcctgtgtag
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