Salmo trutta (river trout): 115205736
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Entry
115205736 CDS
T08542
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
stru
Salmo trutta (river trout)
Pathway
stru04120
Ubiquitin mediated proteolysis
stru04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
115205736
04120 Ubiquitin mediated proteolysis
115205736
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
stru04121
]
115205736
Enzymes [BR:
stru01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115205736
Ubiquitin system [BR:
stru04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
115205736
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_SYVN1_N
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-RING_16
zf-C3HC4_3
zf-RING_11
zf-RING_5
zf-ANAPC11
zf_RING_Vps8_fungal
zf-RING-like
FAR1_N
zf-RING_Vps41
zf-HC5HC2H
FANCL_C
Motif
Other DBs
NCBI-GeneID:
115205736
NCBI-ProteinID:
XP_029627868
LinkDB
All DBs
Position
13:36278619..36293446
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AA seq
616 aa
AA seq
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MVRAALVTATSLALTGAVIAHAYLLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKF
MRKVFFGQLRAAEMEHLIERSWYAVTETCLAFTVFRDDFSPRFVGLFTLLLFIKCFHWLA
EDRVDFMERSPNISWVFHFRVFSLMVLLGVLDFLFVNHACHSIITRGASVQLVFGFEYAI
LMTMVLTTFIKYTLHTVDLQSDNPWDNKAVYMLYTELFTGFIKVLLYMAFMTIMIKVHTF
PLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEDLLASDNVCIICREEMVT
GAKKLPCNHIFHASCLRSWFQRQQTCPTCRMDVLRASNPNQPPAPAPAQPPAPAAPANAP
VPGPPGNVGPGMMPHFPPGLFPFWGPFPGAAPPAGAAGAPGAAEAAQTQGAGTNGASTVG
AAPAPGGPMPGFPFPSFPPPPFPSAPWLTMPPPPPPFVSSMPPPPPALSTMSEAELRELE
QEGRRGLEARLQCLHNIHTLLDAAMLNIDQYLTTVATLIPPQSETSSAAGEASESSHPST
SAETQEKDSQSSTAAEPEAVNGATGFSQPDSTTLGDSEDQRDGEEGDGEEVGEPNPSELR
RRRLHKLETTPPPPDH
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atggtgcgtgcagccctggtgactgccaccagtctggctctgactggcgcagtgattgcc
catgcctacttgctcaaacaccagttctaccccactgtggtctacctcaccaagagtagc
cccagtatggcagtgttgtacattcaggcgtttgtgttggtgttcctgttgggaaagttc
atgcgtaaagtcttcttcggacagctgagagctgcagagatggagcatctgatagagcga
tcctggtatgctgtcacagaaacgtgtctggcctttactgtgtttagagatgacttctct
ccccgcttcgtaggcctcttcaccctgctgctcttcatcaagtgcttccactggctggct
gaggacagggtggactttatggagagaagtcctaatatttcctgggtcttccacttcagg
gtgttctctctgatggtgttgctgggagtcctggacttcctgtttgtcaaccatgcctgt
cacagtatcatcacacgaggggcctctgtccaactggtctttggatttgagtatgccatc
ctgatgacaatggtgctcaccaccttcatcaagtacaccctccacactgtcgacctccag
agtgacaacccctgggataacaaagcagtctacatgctctacacagagctcttcactggt
ttcatcaaggtcctcctgtacatggcgttcatgaccatcatgataaaggtgcacaccttc
cccctattcgccatccggcccatgtacctggcgatgaggcagttcaagaaagctgttacg
gatgcaataatgtcgcgtcgagccatccgcaacatgaatacactttacccagatgccacc
cctgaagatctgctggcttcagacaacgtgtgtatcatctgtcgtgaagaaatggtgact
ggagccaagaaacttccttgcaaccatatcttccacgcaagttgccttcgttcctggttc
cagagacagcagacgtgtcctacatgtcgtatggatgtcctccgggcctcgaaccccaac
cagcctcccgccccagcccctgcccagcctcctgccccagcagcacctgccaacgcccct
gtccctggtccacctgggaacgttggccctggaatgatgccccacttccccccagggctg
tttcctttctggggccccttccctggagcggccccccctgctggtgctgctggcgcccca
ggggccgcagaggcagctcagactcagggagctggcaccaatggggccagtacagtcggt
gctgctcctgctccaggaggccctatgcctgggttccccttcccctctttccctccccca
ccgttcccctcagctccatggctgactatgccaccaccacctccaccgtttgtgtcatcc
atgccccctcctcccccggccctgtccaccatgtcagaggctgagctgagggagctggag
caggagggccgtagaggcctggaggccagactgcagtgtctccacaacatccacactcta
ctggacgctgccatgctcaacatcgaccaatacctcactaccgtcgccacactcattcct
cctcagtcagaaaccagcagtgctgctggcgaggccagtgagtcatctcatccctccact
agtgcagagacccaggagaaagactctcagagcagtacagccgctgaacctgaagctgtg
aatggggccacaggtttctcccagccagactccaccacgttgggcgacagtgaagaccag
agggatggagaggaaggagatggagaggaagtcggagagcccaacccttcagagctgagg
cgccgtcgtctccacaaacttgagaccacaccccctcctcctgaccactaa
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