Salmo trutta (river trout): 115205748
Help
Entry
115205748 CDS
T08542
Name
(RefSeq) protocadherin-11 X-linked-like isoform X1
KO
K16498
protocadherin delta 1
Organism
stru
Salmo trutta (river trout)
Pathway
stru03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
115205748
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
stru01009
]
115205748
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
stru04515
]
115205748
Protein phosphatases and associated proteins [BR:
stru01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
115205748
Cell adhesion molecules [BR:
stru04515
]
Cadherins
Protocadherins
115205748
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_FAT4_N
Ig_Cad99C_N
Cadherin_2
Ig_CLSTN
TMEM154
DUF6249
Ig_TRS130_1st
Motif
Other DBs
NCBI-GeneID:
115205748
NCBI-ProteinID:
XP_029627893
Ensembl:
ENSSTUG00000036018
UniProt:
A0A674CDQ3
LinkDB
All DBs
Position
13:37501503..37833515
Genome browser
AA seq
1245 aa
AA seq
DB search
MIMDLAGQAHVLVVLLTCLVMLSLAQEKDYTVREEQPENVRIGNLRKDLDLNLDPDLKLS
SPLQFKPVYKTGDVPLVRVEANTGEIFTTAHRIDREKLCSRVFNEKRCFYEIEVAVLPDE
IFRLVKIRFLIEDINDNAPLFQSTVINISIPENTAINTRYPVPSAFDPDVGINGIQHYEL
VKSVSEFGLDIIETPEGDRWPQLIVQQSLDREQKDTFVMKIKVEDGGTPPKSSTAILQVT
ISDVNDNRPVFKDSEVEVTIPENAPIGTSVTQLHATDTDLGSNAQIHFSFSNQISSSTKR
HFAIDSTTGLITVKQPLDRESTPVHKLIVLASDGSSTPSRAAVIVNVTDINDNVPSIDTR
YIMNLVNGTVLLSENAPLNTKIALITVTDKDADLNGKVTCYTDHDVPFRLKPVFNDQFLL
ETAAPLDYETTREYAIKIVASDSGKPPLNTSAMVLIKIKDENDNAPIFPQPEIQLSIPEN
NDPSTQLIKISAMDADSGHNAEIIYSLGPDTPDGFNIDRRSGILSVGKRLDREKQEKYSF
TVMARDNGSTSLQSNVTVRLIVQDLNDNSPAFTHPEYNFYVPENLPLYGTVGLITVTDSD
AGDNSVITLSILNGKDNFIIDPQTGVIKPNITFDREQQSSYTFMVKAIDGGQPPSTSFAK
VTINVVDVNDNRPIFVIPSSNFSYDLVQSTTSPGSVVTRVFAIDNDTGMNAELQYSFIGG
SPRGLFAIDKTTGNITLQEKIVSADQGLHRLVVKVKDLGQPESLHAIALIHLFINETVSN
ATFIQEQLRKSLETPLDRNVGDSEVTPQANGYVIVVIAIIAGTMTVILVIFVTALVRCRQ
TPRHKVVQKGKQSGEWVSPNQENRQIKKKKKKKKRSPKSLLLNFVSIEESKPDDPSQEHI
NGTLDLPVELDEQTMGKYNWATTPTTFKPDSPDLAKHYKSASPQPTFQIKPETPMAPNKH
HVIQELPLDNTFVVGCDSHSKCSSTSSDPYSVSECSCQGGFKTPGQIHTRQNQGQTPEKS
LNSDASTCPHKTQRRVTFHLPDGSQESCSDSGLGDHEPSSTASTTQPLPLGFPQEEYYQQ
TSPNSRTEGDGNSDPESTMVEVNLAKALAEASETCTQECLILGHSDSCWMPPVLVPQFQS
PSNTGTLPTLPSFGFQQQQSYSWARGAKADGRQCHTLGRPAPKDDLAKGINRPQFYNTLE
RHCSSKSKVSDPVKVIPLASFSSPLSDQQTPATEGSSDFLHEHQL
NT seq
3738 nt
NT seq
+upstream
nt +downstream
nt
atgattatggacttagcaggtcaggctcatgtgttggtggtgttgctcacctgcctggtc
atgctgtccttggcccaagagaaggactacacggtgagggaggagcagcccgagaatgtc
cgcatcgggaacctgcggaaggacttggacctgaaccttgaccctgacttaaagctgtcc
tcgccactgcagtttaagcctgtctacaaaacgggcgatgtgcctttggtgagggtagag
gccaacactggggagatcttcaccacggctcaccgcatcgaccgcgagaagctctgctcg
agagtattcaacgagaagcgctgcttctacgagatcgaggtcgccgttctgcctgacgag
atcttccgtctggtcaagatccggttcctgattgaggacatcaatgacaacgctccactc
ttccagtccaccgttataaacatatccatcccagagaatacagccatcaacacccggtac
cccgtgccctctgcatttgacccagatgtggggatcaatgggatccaacactatgaactt
gtcaagagtgtgagtgagtttggcctggacatcatcgagaccccagagggagacagatgg
cctcagctgattgtccagcagagcctggaccgcgagcagaaggacaccttcgtcatgaag
atcaaggtggaggatggaggaacgccacccaagtccagcacggccatcctccaggtcacc
atctccgacgtcaatgacaatcgaccggtcttcaaggacagtgaggtggaggtgaccatc
cccgagaacgcccccataggaacctccgtcacccagctccacgccacagacacagacctc
ggctccaacgctcagatccacttctccttctctaatcagatctcctcatccaccaagagg
cattttgccatagacagcaccaccgggctgatcactgtcaagcagcccttagaccgggaa
tccaccccagtccacaaactcatcgtcctagccagcgacggtagctccaccccctccaga
gctgctgttatcgtcaacgtaacggacattaatgacaacgttccgtccatagacactcgg
tacataatgaaccttgtaaatggaacggttctactgtcggagaacgctcctctcaacaca
aaaatagccctaattacagtgacggacaaggacgctgatctgaatggaaaagtgacttgt
tatactgaccacgatgttcctttcaggttaaagccagtatttaatgaccagttcctgctg
gagactgcggcccccctagattacgaaacaaccagggaatatgcaattaagatagtggcg
tcggattcggggaagcctcctttgaacacttcagcgatggttttaattaaaattaaggat
gagaatgacaacgctcccatcttccctcagcctgagattcagctgtccataccagaaaac
aatgatccatccacgcagctcataaagatcagtgccatggatgcagacagcggacataat
gcggagattatttattctcttggccctgacactcctgatgggtttaacatagatcgacgg
tcaggaatcctctccgttggcaaacgcctggatagagagaagcaggagaagtattcgttc
actgtcatggcgagggacaatgggtctacttccctgcagagcaatgtcacagtgaggttg
atagtgcaggacctcaacgacaacagcccagctttcacccatcctgagtataacttctac
gtgcctgagaacctgcctctgtacgggactgtgggtctgatcaccgtcacagattctgac
gcaggtgacaactctgtcataacactgtccattctgaacgggaaagacaatttcattatt
gatccccagaccggtgtgatcaaacccaacatcacgtttgatagagagcagcaaagctca
tacacttttatggtgaaggctatagacggagggcaaccacccagcacttcattcgccaag
gtcaccataaatgttgtggatgtcaatgacaatcgacccatttttgttattccctcgtcc
aacttctcttatgatctggtccagtctaccaccagccctgggtctgtggtcaccagagtg
ttcgctatagacaatgacactggcatgaatgctgagctgcagtacagtttcattggggga
tcaccaagaggactgtttgccatagacaaaacaactggtaatataactctgcaggagaag
atagtctcagccgatcagggtttacacaggctggtggtgaaagtcaaagacctgggtcag
ccagagtccttacacgcaatcgccctcattcacctgttcattaacgagactgtatccaac
gctacattcattcaagagcagctacgtaagagcttggaaactccattggatcgtaacgtg
ggagacagtgaggtcacaccccaagccaacggatacgtgattgttgtcatcgctattata
gctgggactatgacagtcatcttagtcatcttcgtgacggccttggtgcgctgccgtcag
acgcccagacacaaagtggtgcagaagggcaagcagagcggcgagtgggtgtcgcccaac
caggagaaccgtcaaatcaaaaagaaaaagaagaaaaagaagagatctcctaagagcctc
ctcttgaactttgtcagcatagaagaatccaagcctgatgatcccagccaggagcacatt
aatggaaccctggacctgcctgtggagctagatgagcagaccatggggaaatacaactgg
gccactacgccgaccactttcaaacctgacagcccagacttggccaagcattacaagtct
gcttccccccagccaaccttccaaatcaaaccagagaccccgatggcgcccaataaacac
cacgtgattcaggagctcccgctagacaacacgtttgtggtgggctgtgactcgcactcc
aagtgctcctccaccagctcagacccgtactcggtctcagagtgcagctgtcagggggga
ttcaagactcctgggcaaatccacaccagacagaatcagggccagacaccggaaaagtcc
ttgaactcagacgcatccacgtgtccccataagactcagcgtcgcgtgacgttccacctc
ccggacggttctcaggagagctgtagcgacagtggtctaggggaccacgagcccagcagc
actgccagcaccactcagcctctcccccttggcttcccccaggaagagtactaccaacag
acctcgcccaacagccgcaccgagggagacggaaactctgaccctgagtccaccatggtg
gaggtgaacctggccaaggccctggcggaagcctcggagacttgcacccaggaatgtctg
atcctgggccactccgacagctgctggatgccccccgtcctggtgccccagttccagtct
ccgtccaacacgggtaccctgcctaccctgccctcctttggtttccagcagcagcagagt
tactcatgggccaggggagccaaggcggatgggcgtcagtgccataccctgggaaggcct
gcgcccaaagacgatctggctaaagggataaaccggccgcagttctacaacactctggaa
agacactgcagtagcaagagtaaggtgtctgaccccgtcaaggtcatccctctggccagc
ttttcctcgcctttgtcggaccagcagaccccagccaccgagggatcgtctgacttctta
catgagcatcagctgtaa
DBGET
integrated database retrieval system
