Salmo trutta (river trout): 115205806
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Entry
115205806 CDS
T08542
Name
(RefSeq) highly divergent homeobox isoform X1
KO
K24884
highly divergent homeobox
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stru03000
]
115205806
Transcription factors [BR:
stru03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
115205806
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Homeodomain
DUF8371
Motif
Other DBs
NCBI-GeneID:
115205806
NCBI-ProteinID:
XP_029627984
LinkDB
All DBs
Position
13:complement(43194134..43223193)
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AA seq
794 aa
AA seq
DB search
MADLPPCSSSSMEEWQEKRGLQTMNLRSVFTLEQQRVLESYYDNGMTNQSKSCFQLILQC
AQETKLDFSVVRTWVGNKRRKLASRNDQNAGVSHSLSLSNHSMVGGVLSNHGGAGVALSN
HTLAGGALVAGAMLTAEMAAARNIQRGSSHLLPSSSSSSSSSPLSSVNNNNDVILTGIYS
LGSASSSRATVKPLPSDAELPAHVHQTLLNQSQHRSNSSVSSPLQLHSRLGTLSLPRYKT
PSLSSSPSLSSPPSSSPPGPPINSLSKRVGFPTSGARAGEAARGAGVRGGVPRSWARQYG
SLQSGPWPSPSQPQPRPRSNHQTLPPHPPRPRPSPPPHPIPPPSDHSPRIHQVFSLSERG
EGEEIGQGQPSDRSRLEKHRQTPHPSDAIGCLSIAMETGDEEDEWRREEELSNMAATAHG
DLQRGQGVRDSPSRGEGSGERILPSPSLVLSSSRPGPYPRDSYPVSTTTLQTSASIQVPV
SPSAPWLISNSRKRTLQDRTQFSDVDLSQLKRYWDRGMTSLGSVCREKINAAANQLNVDT
EIVKTWIGNRRRKYRLMGIEIPSPKGGPAVFLTSQEGEESPSALSSDGEGLGTPELGDNL
NDGASFCLSEDGTSDSYQREEENGVEDSSSAPMVHNVKIEVVDDDDDGGVEMVGSDMENM
QNLLEFKLEEVQYLESQLENQNQRYYELETFTKSLLTAVRTNNLDRQQELLASLPQPADQ
DWDMSPEGGANSISLTTHSASNHESPLAESNDETPLVNPNKDLPLVTINEDGSLIAELNE
SSVSEELETETGPE
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atggctgatctgcccccctgcagtagcagcagtatggaggaatggcaggagaaacgaggc
ctgcagacgatgaacctgcggtctgtgttcacactggagcagcagcgagtcctggagagc
tactatgacaacgggatgaccaatcagagcaagagctgcttccagctgatccttcagtgt
gctcaggagaccaagctggacttcagtgtggtgcggacctgggtggggaacaagagacgg
aagctggcctcgaggaatgaccagaatgcgggcgtatcccactccttatccttatcgaat
cacagcatggttgggggagttctgtccaatcacggcggggctggggtagctctgtccaat
cacacgctagccggcggggctttagttgcgggcgccatgcttacagcggagatggcggcg
gctcggaacatccagagaggctcctcccatctcctcccttcctcctcctcctcttcttcc
tcctctccgcttagctctgtcaacaacaacaatgatgtcatcctgactgggatttactct
ctaggctccgcctctagttcccgggccactgttaagcccctcccttctgacgctgagctg
cctgcacatgtccatcaaactctgcttaaccaatcacaacacaggagtaacagttctgtc
tcctcccctctccagctccactccagattaggtaccttgtcacttcctcgctataaaacc
ccctccctctcctcttccccctccctctcctcacccccctcctcctcaccccccggcccc
cctatcaacagcctgtccaagagggtgggtttccccacaagtggggccagggccggggag
gcagcacgaggggctggggtacgagggggggtacctcgtagctgggctagacagtatggt
tctctccagtctggcccctggccctctccatcccagccccagcccaggcctcgctccaac
caccagactctcccacctcatccccccaggccccgtccctccccccctcctcaccccatc
cctcccccttcagaccactccccccgcattcatcaggttttcagcctatcagagaggggg
gaaggggaggaaataggacaaggacagccttctgataggagcaggctggagaaacacaga
cagactccccacccctcagacgctattggttgcctctctattgccatggagacgggtgat
gaagaggatgagtggcggagggaggaagagttatccaacatggctgccacggcccatggg
gacctccagagaggccagggggtgagggacagccccagcaggggagagggatctggggag
agaatcctcccatccccctccctggtcctgagcagctccaggcctggtccataccctcgg
gacagctacccagttagtacaacaacactacagacctctgctagtatacaggttccagtc
agtccctctgctccgtggctcatcagtaactccaggaagagaactctacaggacaggacc
cagttcagtgatgtggacctgagccagttgaagcggtactgggaccgagggatgaccagt
ctgggttctgtctgcagagagaagatcaacgcagcagccaatcagctcaacgtagacact
gagatagtcaagacgtggatcgggaaccggaggaggaagtaccgtctgatgggcattgag
atcccgtcccctaaaggtgggccggccgtgttcctgacatcacaagaaggggaggagtcc
ccctctgcgctgagttccgatggggaggggcttggaacgccagagttgggagacaacctg
aacgatggagcgtccttctgtctgtccgaggatgggaccagtgattcgtaccagagagaa
gaagagaatggagtagaggacagcagcagcgctcccatggttcacaacgtgaagatagag
gtggttgatgatgatgatgatggtggtgttgagatggtcggatctgatatggaaaacatg
cagaacctcctggagtttaagcttgaggaggtgcagtatctggagagccaactagagaat
cagaatcagagatattatgagttggagaccttcaccaagagtcttctgactgctgtacgg
accaacaacctggacagacaacaggagctcctagccagtctacctcagcctgcagatcag
gactgggacatgagtccagagggaggggccaactccatctccctaacaacacactctgca
tccaatcacgagtccccgttggctgagagcaacgacgagacaccgttggtcaaccccaac
aaggacctcccattggtcactataaacgaagacggttcattgattgctgagctcaacgag
tcgtctgtatcagaggaactagagactgagaccggaccagagtga
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