Salmo trutta (river trout): 115205857
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Entry
115205857 CDS
T08542
Name
(RefSeq) E3 ubiquitin-protein ligase RNF169-like isoform X1
KO
K20805
E3 ubiquitin-protein ligase RNF169 [EC:
2.3.2.31
]
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
stru04121
]
115205857
03400 DNA repair and recombination proteins [BR:
stru03400
]
115205857
Enzymes [BR:
stru01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
115205857
Ubiquitin system [BR:
stru04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
115205857
DNA repair and recombination proteins [BR:
stru03400
]
Eukaryotic type
DSBR (double strand breaks repair)
Other DSBR factors
Ubiquitin ligases
115205857
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_3
zf-C3HC4_2
zf-C3HC4_4
zf-C3HC4
Prok-RING_4
zf-RING_2
zf-RING_UBOX
zf-RING_4
zf-RING_10
zf-RING_5
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
115205857
NCBI-ProteinID:
XP_029628102
Ensembl:
ENSSTUG00000005732
LinkDB
All DBs
Position
13:complement(46391056..46402415)
Genome browser
AA seq
662 aa
AA seq
DB search
MKMAATGSARSTSGLGQKCKARPADMLNTRTHSQLLTLDEARCPVCSEILLEPVTMPCSH
SVCLHCFKRTVEFTSLCCPLCRLRVSSWARKQSREKSLVNIELWEIVRKSYPQRCKRRME
QRDRETSGEEMFSSPAHVSKSGEIRLEYGNQVKLPMNEEKEGRRKVLHNRKEECGTLKHF
QDPFYGLLSDSENEEPVGKRTRNVSAFVRRTKTSAGFTRDGLQTNVVQRSQSCTDTEEGR
RKMRVSTHLPGLDKASIALSYNAGILLSSENSRSLSAPIIVQDKRHSWRGVVMASSTPFM
VPQSKQERSISPESNDSISEELNHFKPIVCSPCTPPKRLPDGRVMEPTIVKSTPRNLFRS
LERPTSYEASPTILQKWKQIEVDRQSVKVTSKGTLTSPINEDLVFKPSPIEKNGKPCSCA
LAANKGKEHLGRCAKTDSFGQDTEITCIHNKQRLIFYQAIGETALHQKQFTKFHTPFVPL
NSEETVTECGVSSESVVIPVSHCGPTSINQNPTLVPHNINASVRGCNLKSKDSQDQKKYL
DNRNCAQNKPTSRRGKKRSQKTKHLEETESGLKRPRSQSQNGFNIECAQADLYFQQVQQE
SEDRELALNLQRQFDREQQQVDKQKTSFDNYFLRSCSENRIECNPRRSGRISKRNEHFYC
NY
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatggcggcgacagggtctgccagatctactagtggattagggcaaaaatgcaaa
gccaggcccgccgatatgctgaacactcggacacattcacagctgctgaccctggacgag
gcaaggtgtccggtttgttcggagattttattggagccggtaactatgccatgtagccac
tcggtgtgtctgcactgtttcaagcggactgtggaatttaccagtttgtgctgtcctctt
tgccggctgcgagtatccagctgggcccgtaaacagtcccgggagaaaagcctagtgaac
attgaactttgggaaattgttcgaaagagttatccacaacgatgcaagaggagaatggag
cagagagaccgtgagactagtggagaagaaatgttcagctcgcctgctcacgtatccaaa
tctggagagatccgactggagtatggaaaccaagtaaagttaccaatgaatgaagagaaa
gaggggaggaggaaagtcctccacaacagaaaagaggaatgtggaacactcaagcacttt
caagatcctttctatgggttgctgtcagactcggagaatgaagaacccgttgggaagaga
accagaaatgtgtctgcatttgttagaagaacaaagacctcggcaggcttcacaagagat
ggtctacagaccaatgtggtgcagagaagccagagctgtaccgatacagaggagggaagg
cggaaaatgagggtgtctactcatcttcctggactggacaaggcaagtattgctctcagc
tacaatgcaggaatccttctgtcctctgagaacagccgatctctttcggcacccataatt
gtccaagacaagaggcatagctggcgaggcgtcgtcatggcttcatcaacaccttttatg
gtcccccagtcgaaacaggagaggtccattagccctgagagcaatgacagtatctctgag
gagctgaatcacttcaagccaatagtgtgctcgccgtgcaccccaccaaagcgactacct
gacgggcgagtgatggaacccacaattgtgaagtccaccccccggaacttattccgcagc
ctggagaggcccaccagctatgaagccagccctactatcctccagaaatggaagcagata
gaggtggaccgtcagtctgtcaaagtgacctcgaagggcaccttgaccagccccataaac
gaggaccttgttttcaaaccaagccccatagagaagaacggcaagccctgtagctgcgct
ctagcagcaaataagggaaaagaacacttgggtaggtgtgccaagactgattcctttggg
caagacactgaaataacctgtatacataataaacaaagactgatattttaccaggccatt
ggagagacagccctccatcaaaaacaattcacaaagtttcatactccatttgtaccttta
aacagtgaggagactgtaacagagtgtggggtttcttcggagtctgtggtgatacctgta
tcacattgtggaccaacttcaattaatcaaaatccaaccttagtcccacacaatattaat
gccagtgttaggggttgcaatcttaaatcaaaggactcacaggatcagaaaaaatatttg
gacaatagaaactgtgcccagaacaaacctacctcaaggaggggcaagaagaggagccag
aagaccaaacacctggaagagacagagtctggactcaagaggccaagatcccagagccaa
aatggtttcaatatagagtgtgcacaggctgacctgtattttcaacaagtacagcaagag
agcgaggatagagagctagcgttgaatcttcaaagacagtttgacagggaacagcaacaa
gtagacaagcaaaagaccagttttgacaactactttctccggtcctgcagtgaaaacaga
atcgaatgcaatccacgtagatcaggaagaatttccaaaaggaatgagcacttttattgc
aattattaa
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