Salmo trutta (river trout): 115205899
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Entry
115205899 CDS
T08542
Name
(RefSeq) ubiquitin conjugation factor E4 A-like
KO
K10596
ubiquitin conjugation factor E4 A [EC:
2.3.2.27
]
Organism
stru
Salmo trutta (river trout)
Pathway
stru04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
115205899
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
stru04121
]
115205899
Enzymes [BR:
stru01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115205899
Ubiquitin system [BR:
stru04121
]
Ubiquitin ligases (E3)
U-box type E3
115205899
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
115205899
NCBI-ProteinID:
XP_029628186
Ensembl:
ENSSTUG00000018917
LinkDB
All DBs
Position
13:complement(48864124..48890859)
Genome browser
AA seq
1075 aa
AA seq
DB search
MTDQGNNNHNISRNPFAALFSSLADAKQFASGQKPPSHHGEPPSEDSEGSQSESENSDSI
EDNDDSVAEISRSFLSRQELCEQLNINHMIQRIFLITLDNSDPSLRGGNGIPPRCVFLEE
MAAEMDGQDWLDMDNIEQALFNRLLMLEPGNHLIYMTSCNAVNLSADRDAGDKCAIPFLY
ACYQRAKEEVTKVPEKLLSYAVRCKNLTVSNTRTVLLTPEIYISQNVYEQLLDLLLEGVG
GAQLEEVVEFVEEVIAGLLADQEVRTFSEVIGPVLDIFQGRVKDLDLCQLLLFSYLDLLL
YFSRQKDIAMVLVEHIQPKDPKNGLQYQKTLLGTVLSISCLLKTPGVVEGHGFFLNPSRS
SPQEMKVQESNIHQFMDQFHDKLYQLLKNLLQQSGETRHLLLSWLGGCLQANAGRAKIWA
NQMPEIFFQMYASDAFFLNLGAALLKLCQPFCRPRSPKLLTFNPTYCALKELSEEERRNR
NVHARGLDKETCLVPLPPQQSVEYAQSYSLLTENLILTQMTLHLGFHRLHEQMVKMNQSL
HRLQGTWREAQLTGGPAAEQLREQFERLMTVYLSTKAAATQPGMLQCCLNLQASSATLLV
QLGLSNQGPEHAQLSFPLPPLHNSLLCHMPEFFAENLGDFFVFLRRFADEVLESSAESLE
QVLNFITVFMGNVERMKNPHLRAKLAEVLEAVMPHMEPASAGSAQPVMFQRQRVFCSYRH
APHLAEALIAVFVDIEFTGDPHQFEQKFNYRRPMYPILKYMWGKESYRESIKSLAVYASE
NLEAMNPPLFLRYLNLLMNDAIFLLDEAIQYLSKIKLLQLEKDHGEWEGLAPDALREKES
SLQMLGQLARFHNIMSNETIGTLAFLTSEIKSIFVHPFMAERIISMLNHFLQHLVGPKMG
ALKVKDFSEFDFKPQQLVSDICNIYLNLGDEENFCATVPKDGRSYSPTLFSQTVRVLKKI
NKPGEIIVGFGLLADKIKSHADRQLQDEETYADAPDEFLDPIMSTLMLDPVLLPSSNVTV
DRSTIARHLLSDQTDPFNRSPLTMDQIRPNEELKQQILQWLAQHKQERLQMGPSG
NT seq
3228 nt
NT seq
+upstream
nt +downstream
nt
atgactgaccagggcaacaacaaccacaacatttcccgcaaccccttcgctgcccttttc
agctccctcgccgacgccaagcagtttgcatcgggccagaaaccaccttcgcaccatggc
gaaccaccctcggaggactctgaggggagtcagtcagagtcggagaactcggacagcatc
gaggacaatgacgactcggtggccgaaatcagccgctccttcctgtcgcggcaggaactg
tgcgaacagctcaacatcaaccacatgatccagaggatcttcctcatcaccttggacaac
agtgaccccagtctgagaggaggcaatgggattcctccacgctgtgtgttcctggaggaa
atggccgcagagatggacgggcaagactggctggatatggacaacatcgagcaggcactc
ttcaacagattactgatgctggagccagggaaccacctcatctacatgacctcgtgtaat
gctgtgaatctctctgctgaccgagacgctggggacaagtgcgccataccgttcctctac
gcatgctaccagagagccaaggaagaggtcaccaaagtaccggagaagctgctgtcgtat
gcggtgcgctgtaagaacctgacggtgtccaacacgcgcacagtcctgctcacccccgag
atctacatcagccagaacgtgtatgagcagctactggatttgctgctggagggagttggc
ggagcccagctggaggaggtagtggagttcgtggaggaggtgatcgctggcctgttggct
gaccaggaggtgcgcaccttcagcgaggtgatcgggcctgtgctcgatatcttccaaggc
cgtgtgaaagacttggatctctgccagctgctgctcttctcctacctggacttgctcctc
tacttcagccgccaaaaagatatcgctatggtattggtggagcacatccaacccaaagat
cccaaaaatgggcttcagtatcagaagaccctccttggcactgtgttgagtatctcttgc
ctgctgaagaccccgggggtggtggagggtcacggcttcttcctcaacccatcacgctcc
agtccacaggaaatgaaggtccaggaatccaacatacaccagttcatggaccagttccat
gacaagctgtaccagctcctgaagaacctgctgcagcagtcaggtgagacgcgccatctg
ctgctctcctggctgggcggctgcctgcaggccaatgccgggcgcgccaagatctgggcc
aaccagatgcccgagatcttcttccagatgtacgcctcagacgccttcttcctcaacctg
ggcgccgcgctgctcaagctgtgccagcccttctgccggccgcgctcgcccaagctgctc
accttcaaccccacctactgcgccctcaaggagctaagcgaggaggagcggcgcaaccgc
aacgtgcatgccagaggtctggacaaagagacgtgtctcgtcccccttcccccccagcag
tcggtggagtacgcccagtcatacagcctcctcactgagaacctcatcctcacccagatg
actctgcacctaggcttccacagactccacgagcagatggtgaagatgaaccagtcgctc
caccggctgcagggtacgtggcgggaggcccagctcacgggtggcccggcggccgagcag
ctccgcgagcagttcgagcgcctcatgacggtctatctgtcgaccaaggcagcagccacc
cagccgggcatgctgcagtgctgcctcaacctgcaggcgtccagtgccacactgctggtt
caactgggcctcagcaaccaggggcccgagcacgcccagctctccttccccctgccgcca
ctacacaacagcctgctctgtcacatgccagagttctttgcagagaacttgggagatttc
tttgtcttcctccgccgctttgctgacgaggtcctggaatcttctgccgagagcttggag
caggtcctcaacttcatcactgtgttcatgggaaacgtggagaggatgaaaaaccctcat
ttgcgggcaaagctggcagaggtgctggaggcggtgatgccccacatggaaccggcgtcg
gccggctcggcccagccggtcatgttccagcgccaaagggtcttctgctcctaccgccat
gcccctcacctggccgaggcactcatcgctgtgttcgtggacattgagttcactggtgat
cctcaccagtttgaacagaagttcaactacaggagacctatgtatcccatcctcaagtac
atgtgggggaaggagagctacagagagagcattaagagtcttgctgtttatgcatccgag
aacctcgaagccatgaatcctccactcttcctgcggtatctgaatctcctgatgaacgac
gccatcttcctactcgacgaagctatacagtacctgagcaagatcaagctactacagctg
gagaaggaccatggcgagtgggagggcctggctcctgatgccctcagggagaaggagtcc
agtctgcagatgttgggacagctggcacgtttccataacatcatgtccaacgagaccatc
ggcacactggctttcctcacatcagagatcaagagtatttttgttcaccctttcatggcc
gagaggatcatctccatgctcaaccacttcctgcagcacctggttggacccaagatgggc
gccctgaaggtgaaagacttcagcgagtttgacttcaagccccaacaactggtctccgat
atctgcaacatctaccttaacctgggtgatgaagagaatttctgtgccactgtcccaaaa
gacgggcgctcctactctcccacactcttctctcagactgtccgagtcctgaagaagatc
aacaagcccggagaaattattgtgggtttcggtctccttgctgacaaaataaagtctcat
gcagaccgacagctgcaggatgaggaaacatacgcggacgccccggacgagttcctggac
cccattatgtccacgctgatgctcgaccctgtgctgctcccctcttccaatgtcacggtc
gatcgctcgactatagcacggcacttactcagcgatcagacagacccattcaaccgcagc
ccactcacaatggaccagatccggcccaacgaggagctgaagcaacagatcttacagtgg
ctggcccagcataagcaggagcgactgcagatgggccctagtggctag
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