Salmo trutta (river trout): 115205917
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Entry
115205917 CDS
T08542
Name
(RefSeq) nuclear pore complex protein Nup85-like
KO
K14304
nuclear pore complex protein Nup85
Organism
stru
Salmo trutta (river trout)
Pathway
stru03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
115205917
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stru03019
]
115205917
03036 Chromosome and associated proteins [BR:
stru03036
]
115205917
Messenger RNA biogenesis [BR:
stru03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
115205917
Chromosome and associated proteins [BR:
stru03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
115205917
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleopor_Nup85
4HB_MCP_1
Motif
Other DBs
NCBI-GeneID:
115205917
NCBI-ProteinID:
XP_029628217
Ensembl:
ENSSTUG00000009936
LinkDB
All DBs
Position
1:complement(67458230..67472342)
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AA seq
651 aa
AA seq
DB search
MEEVDVEPTTTPIPGFDSNKKHLGFVWGPGDILVYETIYKASGGSAGGCPFVHEVRKDED
IYSPILRKLFNESHHIFVGLQRIRDDLPSKNKKPQFVSISKNYRSVIRACMEELQQVAVS
TQDAALATQYGNQVSILLAVELIWNLCEVLFIDAAPAGSLVLHLLDWVRLHKADVDEKAR
EVLASESPAEHQAYWDVVISYVLQGRMDEARQVLVKRATLQPAARAMFKLLDNLLMKMPI
FNPGETQTLTEFDVKWRHWREEVDRCLQDQSFASNPHLEDICKILVGDEDVLLEHKELLS
TWYHFLVTRLLFSHPTVKPTELHYYAQSSMHMFLDTRCVPEPLDSILLAAFEFDIHQVIK
DCSIALNNWWFVGHLTDLLDHCKLLQSHNLHFGSNLREFLLLEYASGLFTHHSLWQLAVD
YFDHCPEFGRVYLELQIERVPLDTERKALKVIRICEQRQMTEQVRSICKIMAKKALRNNR
LGSALSWSIRAKDAAFATLISERFLQDYCAKGTFSDLDLIDNLGPAMLLSDRLTFLGKYR
EFHRLYGEKRFSDAAKLLLSLMTAKIAPRSFWMTLLTDALPLLEQKEVIFSADQTHELMF
CLEELTSGKSVPNPDRPMQDEDIETTKIELLRLALARNLAMAIVKEGTVEV
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggtagatgtggagccaacaactactcctatccctgggttcgacagcaacaaa
aaacacttgggatttgtgtggggtcctggagatatcctggtttatgagaccatttacaaa
gcatcaggtggatctgcagggggttgtcccttcgtccatgaggtcaggaaagatgaggac
atctattcccctattttgcgtaaactcttcaatgagtcccatcacatctttgttggtctg
cagaggatcagagacgatctgcccagcaagaacaagaaaccccagttcgtcagtattagc
aagaactacaggtctgtgattcgagcatgcatggaggaactccagcaagtcgcagtttct
acacaagatgcagcattggctacacagtatggaaatcaggtgtcaatcctgctggcagta
gagctgatctggaatctttgtgaagtgttgttcatcgatgcagctccagctggctcactg
gtgctccacctgctcgactgggtgaggctgcacaaggctgacgtggatgagaaggccagg
gaggtgctggcgagtgagagccccgcagagcaccaggcctactgggacgtggtgatcagc
tacgtgctgcagggccggatggatgaggccagacaggtcctggtgaaacgggcaactttg
cagcctgcagccagggccatgttcaaactgctggacaacctgcttatgaaaatgcccatc
ttcaatcctggtgagactcagaccctgacagagtttgatgtaaagtggagacactggcgc
gaggaggtggaccgctgtctccaggaccagtcctttgccagcaacccccacctggaggac
atctgtaagatcctggttggtgatgaggatgttctcctggagcacaaggagctgctgagt
acctggtatcacttcctggtcaccagactgctgttctcccaccccactgtcaagcccaca
gagctgcactactacgcacagtctagcatgcacatgttcctggacacgaggtgtgtccca
gagcccctggacagcatcctgctggcagcctttgagtttgacatccaccaggtcatcaag
gactgcagcattgctctcaacaactggtggtttgtggggcatctgactgacctgctggac
cactgtaaactgctccagtctcacaacctacattttggctccaacctgagggagtttcta
ctgctggagtacgcctcaggactcttcacccatcacagcctgtggcagctggctgtggac
tactttgaccactgtccagagtttggccgtgtgtacctggagctacagatcgagcgtgtt
cctctggacacggagcgcaaggccctgaaggtgatcaggatctgtgagcagaggcagatg
actgaacaagtgaggagcatctgtaagatcatggccaagaaggccctgaggaacaacaga
ctgggctctgctctctcctggagcatcagagccaaagatgctgccttcgccaccctcata
tcagagaggtttctccaggactactgcgccaaagggaccttctctgatctggacctgatt
gacaacctgggtccagccatgctgctcagtgacaggcttacttttctagggaagtaccgt
gagttccatcggctgtacggcgagaagcgtttctcggacgccgccaagctcctcctctcc
ctgatgacggccaagatcgccccacgttccttctggatgactctgctgaccgatgccctg
cccctgctggagcagaaagaggtgatcttctctgctgatcaaactcatgagctgatgttc
tgtctggaggagctgacctcagggaagagtgttcccaacccagacagacccatgcaggat
gaggacatcgagacgaccaagattgagctcctgcggctagcgctagcccgtaacctggcc
atggccatagtgaaggaggggacagtggaagtttga
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