Salmo trutta (river trout): 115205965
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Entry
115205965 CDS
T08542
Name
(RefSeq) Down syndrome cell adhesion molecule-like protein 1 homolog
KO
K06768
Down syndrome cell adhesion molecule-like protein 1
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
stru04515
]
115205965
Cell adhesion molecules [BR:
stru04515
]
Immunoglobulin superfamily
Other
115205965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
Ig_3
I-set
Ig_DSCAM-DSCAML_C
Ig_2
ig
V-set
C2-set_2
Pur_ac_phosph_N
Ig_5
Interfer-bind
V-set_CD47
fn3_2
Ig_6
DUF1461
ChitinaseA_N
Receptor_2B4
Motif
Other DBs
NCBI-GeneID:
115205965
NCBI-ProteinID:
XP_029628282
Ensembl:
ENSSTUG00000002008
LinkDB
All DBs
Position
13:complement(50867021..50919035)
Genome browser
AA seq
1649 aa
AA seq
DB search
MCAAKGAPPPTITWTLDDEAVARDPSRVRASQYTLSDGSTVSHVNVSSPEIRDGGVYRCA
ARNSAGSAEYQARINVRGSPRIRDMRNITAVAGRNTFINCRVIGYPYYSIKWYKEGLLLP
DNHRQVVYENGTLKLSDVQKVLDEGAYLCSVLIQPQIFISQTVYVQVKVPPLIQPFDFPP
TSIGKLMYIACVVSSGDMPIHITWRKDGQEIVPSSGVNIETKEYMSSLQIGKVSLKHNGN
YTCIASNDAATVSSERQLTVTVPPQFVVQPNNQDGIYGKAGVLNCSVDGYPPPKVMWKHA
KGIGNPQQYHPVPLTGRIQIMGNGSLLIRHVLEEDRGYYLCQASNGVGSDISKSMVLTVK
IPAMITSHPNTTMAIKGQIKELNCTARGEWPIIIRWERGDTVIDPDRNPRYAITTSPNEK
SDEVLSTLKLKPAERGDSVFFSCHAINSYGEGRGLIQLTVQEPPDPPELEVREVKDRSMN
LRWTQRFDGNSIITSYDIEYKNKTDPWELKHATRKISPTNNQANIVDLHPAQVYSIRMFS
YNKIGHSQASKELTISTEEAQPDGPPMEVFLQPMTSQSIRVTWKAPRKELQNGVIRGYQI
GYRENGPGSNGQYSIVEMKATGDSEVYTLDNLKKFAQYGVVVQAFNRAGTGPSSSEINAT
TLEDVPSQPPQNVRAISVTSDEAVITWAEPPRLTLHGVLKGYRVVFWSLFPDGEWGEMQN
ITTSREQVELRGLEKFTNYSVQVLAYTQAGDGVRSNVLYIQTREDHPGPPAGIKAVPSST
SSVVVSWLPPHKPNGIIRKYTIYCSSPGSGQPAPSEYEANPELLFYRVTHLNRGQQYLIW
AAAVTTAGRGNISDKVTVEPAGKAPAKILSFGGTVTTPWMKEVRLPCSSVGEPTPTIKWT
KDSEDTAIPVTLDGQRLIMANGTLVLRSVKAEDSGYYTCTATNTLGFDTIIVNLLVQVPP
DQPRLTVSTTSTSSITLAWIPGDNGGSSIRGFVLQYSVDNMEGWRDVFISSSERSFKLDN
LRCGTWYKVKLAAKNSVGAGRISEIIEAKTHGREPQFNKDHPVFTHVNSTHARLNLQGWA
SGGCPITAVLLEFRPKGNWAWQNVRTNATADVFLAELREATWYELKMKACNSAGCGNQSS
QFATLDYDGSTIPPIKSARPEGDDVKKLFSIGCPVILVTLVVALLFVIRKKRKEKRLKRL
RDAKSLAEMLISKNNRSFDTPVKGPPQGPRLHIDIPRVQLLIEDKEGIKQIGEDKATIPV
TDTEFSQNMNPQSFCTGVSVHHPALIQNTGPLIDMSDIRPGTNPVSRKSVKSTHSTRNRY
SSQWTLTKCQSSTPARTLTSDWRTVGSQHGIAVTESDSYSASLSQDTDKGRNSMVSTESA
SSTYEELARAYEHAKLEEHLQHAKFEITECFISDSSSDQMTTGTNDNADSMTSMSTPSET
GLCRFTASPPKPQDYDRGRPTNVAVPIPHRANKSEWTGKSDYCNLPLYMKTDPFFRKQSE
LRDPCPVVPPREASIRSLAQRAYHSQGRHMTLDSSKQQQALTVGHAGLAGLGASGGSSGG
GSGGAVGGTTGGPSGGSSTSSLPQRTLTMPGSSSSSAQSAAAATDAASGGATGGESRDSL
LESSSSGLGRLDRQKQAAGGAYSKSYTLV
NT seq
4950 nt
NT seq
+upstream
nt +downstream
nt
atgtgcgctgccaaaggcgcccctccccccaccatcacctggactctggatgatgaggct
gtagccagggacccgtcccgggtgagggccagccagtacacgctgtcggacggctccacc
gtgtcccacgtcaacgtcagcagcccagagatccgcgacggaggggtgtatcgctgcgcc
gcacgcaactcggccggtagcgccgagtaccaagcgcgcataaacgtaagaggttctccc
aggatcagggatatgcgtaacatcacggcggtggctgggaggaacacctttataaactgc
cgtgtgattggctatccctactactcaatcaagtggtacaaggagggacttctgctcccc
gacaaccatcgtcaggtggtgtatgagaatggtactctgaagctaagtgacgtccagaag
gtcttggacgagggggcgtacctctgcagtgtgctcatccaaccacagatcttcatcagc
cagaccgtctacgtccaggtcaaagtgcctcctctgatccaaccctttgacttccccccc
acctccattgggaagctcatgtacatcgcctgcgtggtgtcgtctggtgacatgcccatc
cacatcacctggcgtaaggacggccaggagattgtgccctcgtccggcgtcaacatcgag
accaaggagtacatgagctcgctgcagatcggcaaggtgtcgctcaagcacaacggcaac
tacacctgcatcgctagcaacgacgccgccaccgtcagctctgagagacagctcactgtc
acagtgcctcctcagtttgtggtccagcccaataaccaggatgggatctacggcaaggcg
ggggtcctcaactgctccgtggacggatacccccctcccaaagtcatgtggaagcacgcc
aaaggtatagggaacccccagcagtaccacccagtgcctctgaccggtcggatccaaatc
atggggaacggctccctgctgatccgtcatgtcctggaggaggaccggggatactacctc
tgtcaggcctccaacggcgtgggctccgacatcagcaagagcatggtcctgacggtcaag
atcccagcaatgatcacgtcacaccccaacaccaccatggccattaagggccagattaag
gagctgaactgcacagcgaggggggaatggcctatcatcatccgttgggagcgtggtgac
acggtcatcgaccccgaccgtaaccctcgctacgccatcaccaccagccccaacgagaag
agtgacgaagtattgtctacgctgaagctgaagccagcagagcggggtgactcggtcttc
ttctcctgccatgccatcaactcatatggagaaggccggggcctcatccagctcactgtg
caagagcccccagaccctccagagttggaggtgagggaggtgaaggatcggagtatgaac
ctgcgctggacccagagatttgacggcaacagcatcatcaccagctacgacattgagtac
aagaacaagaccgatccgtgggagttgaagcatgccacccgtaagatctctcccaccaat
aaccaggccaacatcgtggatctacaccctgcccaagtctacagcatccgcatgttctcc
tacaacaagatcggacacagtcaagccagcaaggagctcaccatcagcacagaggaagca
cagccggatggtcctcctatggaggttttcctccagcctatgacatcgcagagcatccgc
gtcacctggaaggcccccaggaaggagcttcagaacggggtgatccgggggtaccagatc
ggttaccgtgagaacgggccgggcagtaacggccagtacagcatcgtagagatgaaggct
actggggacagtgaggtgtacaccctggacaacctgaagaagtttgcccaatatggagtg
gtggtccaggccttcaacagggccggcacaggcccctccagctctgagatcaacgctacc
acactggaagatgtgcccagccagccgccccagaacgtgcgggccatctcggtgacatca
gacgaggcggtaatcacgtgggcggagcccccgcgtctgacactgcacggcgtgctgaag
ggttaccgtgtggtcttctggtccctcttccccgacggagaatggggagagatgcagaac
atcacgacatctcgtgagcaggtggagctgagagggctggagaagtttactaattacagt
gtgcaggtgctggcctacacacaggctggggacggtgtcaggagcaatgtgctgtacatc
cagacccgcgaggaccaccctggccccccggctggcatcaaagctgtgccctcatccacc
agcagtgtggtggtttcctggctacccccgcacaagcccaatggaatcatccgcaagtac
accatctactgctccagccccggatcaggccaaccggcccccagtgagtacgaggccaac
cccgagctgctgttctaccgggtcacccacctgaaccgcggacagcagtacctcatctgg
gccgccgccgtcaccaccgccggacggggaaacatcagcgacaaggtcactgtggagcct
gctgggaaggccccagctaagatcctatcgttcggaggtacagtgaccactccctggatg
aaggaggtgaggctaccctgcagctcagtgggcgaacccacccccaccatcaaatggacc
aaagacagtgaggacacagccatcccggtaactctggacggtcagaggctcatcatggcc
aatggcacgctggtcctgcgctcggtgaaagctgaggattctgggtactacacgtgcacg
gccaccaacacgctgggctttgacaccatcattgtcaacctgctggtgcaagttcctcca
gaccagccccgtctgactgtctccaccacctccacctcctctatcaccctggcctggatc
cctggggacaacggaggatcctccatcagaggtttcgtgctgcagtactcggtggacaac
atggagggttggagggatgtgttcatcagttccagtgagaggtccttcaagctggacaac
ctacgctgtggcacctggtacaaggtcaaactggccgccaagaacagcgtgggagcggga
cgcatcagtgaaatcatcgaggctaagacccacggacgagagccccagttcaataaggac
catcctgtgttcacccacgtcaactctacccacgcccggctcaacctacagggctgggcg
agcggtggctgccccatcacggccgtgctgctggagttcagacctaaggggaactgggcg
tggcagaatgttcgcaccaacgccaccgccgacgtgttcctggctgagctccgcgaggcc
acctggtacgaactgaagatgaaggcgtgtaacagcgccggctgtgggaaccagagctct
cagttcgccacgctggactacgacggcagtaccatccctcccatcaagtcagcgcggccc
gaaggcgacgacgttaagaagctcttctccattggctgccccgtcatcctggtcactctg
gtcgtcgccctgctctttgtcatccgcaagaaacgcaaagagaagagactgaagagactg
agagatgccaaaagcctggctgagatgctgatcagtaagaataaccggagctttgacacc
cctgtgaaggggcccccccagggcccccgacttcacatcgacatccccagagtccagctg
ctcatcgaggataaggaaggcatcaaacagatcggtgaagacaaagccaccatcccagtg
acggacacagagttcagccagaacatgaatccacagagcttctgtacgggcgtgtctgtg
catcaccccgccctcatccagaacaccggccctctgattgacatgtctgacatcagacca
gggacaaacccggtgtcgaggaagagcgtgaagtccacccacagtacgaggaaccgctac
tccagccagtggaccctgaccaagtgccagtcgtccacgcccgcccgtaccctcacctcc
gactggcgcaccgtgggctcccagcatggcatcgccgtcaccgagagcgacagctacagc
gccagcctctcacaggacacggataagggacgtaacagcatggtgtccacagagagcgcg
tcctccacctatgaggagctggcgcgggcctacgaacacgccaagcttgaggagcacctg
cagcacgccaagtttgagatcaccgagtgcttcatctccgacagttcctcagaccagatg
accacgggcaccaacgacaacgccgacagcatgacctccatgagcaccccgtccgaaacg
ggcctgtgtcgcttcaccgcctcgccacccaaaccccaggactacgaccgcggcagacct
accaacgttgccgtgcccatcccccaccgcgccaacaagagcgagtggacgggcaaaagt
gactactgtaaccttcccctctacatgaagacagaccctttcttccggaagcagtcggag
ctgcgtgacccgtgcccggtggtgccgccccgcgaggcctccatccgcagcctggcccag
cgggcataccactcccagggccgccacatgactctggactcctccaagcagcagcaggct
ctgactgtgggccacgctggcctggccggcctcggcgcctcaggaggatcatcagggggt
ggaagcggtggtgctgtaggagggacaactggagggccgtctggtggttccagcacctcc
tccctgccccagaggactctcaccatgcccggctcctcctcttcctctgcccagagcgct
gcagccgctaccgacgcagccagcgggggagccacggggggagagtccagagactctctg
ctggagagcagctcatcaggcctgggcagactagacagacagaagcaggcggctggcggg
gcctattccaaatcttatacactggtgtag
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integrated database retrieval system
