Salmo trutta (river trout): 115205965
Help
Entry
115205965 CDS
T08542
Name
(RefSeq) Down syndrome cell adhesion molecule-like protein 1 homolog
KO
K06768
Down syndrome cell adhesion molecule-like protein 1
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
stru04515
]
115205965
Cell adhesion molecules [BR:
stru04515
]
Immunoglobulin superfamily
Other
115205965
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
Ig_3
I-set
FN3_DSCAM-DSCAML_C
Ig_2
ig
V-set
Ig_VEGFR-1-like_5th
C2-set_2
Pur_ac_phosph_N
VEGFR1-3_N_Ig-like
Fn3_ROS1
Interfer-bind
V-set_CD47
fn3_2
Ig_6
Fn3_VIN3
Fn3_Dep-1_3rd
Ig_MYOM1
Lit
ChitinaseA_N
TED6
Motif
Other DBs
NCBI-GeneID:
115205965
NCBI-ProteinID:
XP_029628282
LinkDB
All DBs
Position
13:complement(50867021..>50919035)
Genome browser
AA seq
1649 aa
AA seq
DB search
MCAAKGAPPPTITWTLDDEAVARDPSRVRASQYTLSDGSTVSHVNVSSPEIRDGGVYRCA
ARNSAGSAEYQARINVRGSPRIRDMRNITAVAGRNTFINCRVIGYPYYSIKWYKEGLLLP
DNHRQVVYENGTLKLSDVQKVLDEGAYLCSVLIQPQIFISQTVYVQVKVPPLIQPFDFPP
TSIGKLMYIACVVSSGDMPIHITWRKDGQEIVPSSGVNIETKEYMSSLQIGKVSLKHNGN
YTCIASNDAATVSSERQLTVTVPPQFVVQPNNQDGIYGKAGVLNCSVDGYPPPKVMWKHA
KGIGNPQQYHPVPLTGRIQIMGNGSLLIRHVLEEDRGYYLCQASNGVGSDISKSMVLTVK
IPAMITSHPNTTMAIKGQIKELNCTARGEWPIIIRWERGDTVIDPDRNPRYAITTSPNEK
SDEVLSTLKLKPAERGDSVFFSCHAINSYGEGRGLIQLTVQEPPDPPELEVREVKDRSMN
LRWTQRFDGNSIITSYDIEYKNKTDPWELKHATRKISPTNNQANIVDLHPAQVYSIRMFS
YNKIGHSQASKELTISTEEAQPDGPPMEVFLQPMTSQSIRVTWKAPRKELQNGVIRGYQI
GYRENGPGSNGQYSIVEMKATGDSEVYTLDNLKKFAQYGVVVQAFNRAGTGPSSSEINAT
TLEDVPSQPPQNVRAISVTSDEAVITWAEPPRLTLHGVLKGYRVVFWSLFPDGEWGEMQN
ITTSREQVELRGLEKFTNYSVQVLAYTQAGDGVRSNVLYIQTREDHPGPPAGIKAVPSST
SSVVVSWLPPHKPNGIIRKYTIYCSSPGSGQPAPSEYEANPELLFYRVTHLNRGQQYLIW
AAAVTTAGRGNISDKVTVEPAGKAPAKILSFGGTVTTPWMKEVRLPCSSVGEPTPTIKWT
KDSEDTAIPVTLDGQRLIMANGTLVLRSVKAEDSGYYTCTATNTLGFDTIIVNLLVQVPP
DQPRLTVSTTSTSSITLAWIPGDNGGSSIRGFVLQYSVDNMEGWRDVFISSSERSFKLDN
LRCGTWYKVKLAAKNSVGAGRISEIIEAKTHGREPQFNKDHPVFTHVNSTHARLNLQGWA
SGGCPITAVLLEFRPKGNWAWQNVRTNATADVFLAELREATWYELKMKACNSAGCGNQSS
QFATLDYDGSTIPPIKSARPEGDDVKKLFSIGCPVILVTLVVALLFVIRKKRKEKRLKRL
RDAKSLAEMLISKNNRSFDTPVKGPPQGPRLHIDIPRVQLLIEDKEGIKQIGEDKATIPV
TDTEFSQNMNPQSFCTGVSVHHPALIQNTGPLIDMSDIRPGTNPVSRKSVKSTHSTRNRY
SSQWTLTKCQSSTPARTLTSDWRTVGSQHGIAVTESDSYSASLSQDTDKGRNSMVSTESA
SSTYEELARAYEHAKLEEHLQHAKFEITECFISDSSSDQMTTGTNDNADSMTSMSTPSET
GLCRFTASPPKPQDYDRGRPTNVAVPIPHRANKSEWTGKSDYCNLPLYMKTDPFFRKQSE
LRDPCPVVPPREASIRSLAQRAYHSQGRHMTLDSSKQQQALTVGHAGLAGLGASGGSSGG
GSGGAVGGTTGGPSGGSSTSSLPQRTLTMPGSSSSSAQSAAAATDAASGGATGGESRDSL
LESSSSGLGRLDRQKQAAGGAYSKSYTLV
NT seq
4718 nt
NT seq
+upstream
nt +downstream
nt
gttctcccaggatcagggatatgcgtaacatcacggcggtggctgggaggaacaccttta
taaactgccgtgtgattggctatccctactactcaatcaagtggtacaaggagggacttc
tgctccccgacaaccatcgtcaggtggtgtatgagaatggtactctgaagctaagtgacg
tccagaaggtcttggacgagggggcgtacctctgcagtgtgctcatccaaccacagatct
tcatcagccagaccgtctacgtccaggtcaaagtgcctcctctgatccaaccctttgact
tcccccccacctccattgggaagctcatgtacatcgcctgcgtggtgtcgtctggtgaca
tgcccatccacatcacctggcgtaaggacggccaggagattgtgccctcgtccggcgtca
acatcgagaccaaggagtacatgagctcgctgcagatcggcaaggtgtcgctcaagcaca
acggcaactacacctgcatcgctagcaacgacgccgccaccgtcagctctgagagacagc
tcactgtcacagtgcctcctcagtttgtggtccagcccaataaccaggatgggatctacg
gcaaggcgggggtcctcaactgctccgtggacggatacccccctcccaaagtcatgtgga
agcacgccaaaggtatagggaacccccagcagtaccacccagtgcctctgaccggtcgga
tccaaatcatggggaacggctccctgctgatccgtcatgtcctggaggaggaccggggat
actacctctgtcaggcctccaacggcgtgggctccgacatcagcaagagcatggtcctga
cggtcaagatcccagcaatgatcacgtcacaccccaacaccaccatggccattaagggcc
agattaaggagctgaactgcacagcgaggggggaatggcctatcatcatccgttgggagc
gtggtgacacggtcatcgaccccgaccgtaaccctcgctacgccatcaccaccagcccca
acgagaagagtgacgaagtattgtctacgctgaagctgaagccagcagagcggggtgact
cggtcttcttctcctgccatgccatcaactcatatggagaaggccggggcctcatccagc
tcactgtgcaagagcccccagaccctccagagttggaggtgagggaggtgaaggatcgga
gtatgaacctgcgctggacccagagatttgacggcaacagcatcatcaccagctacgaca
ttgagtacaagaacaagaccgatccgtgggagttgaagcatgccacccgtaagatctctc
ccaccaataaccaggccaacatcgtggatctacaccctgcccaagtctacagcatccgca
tgttctcctacaacaagatcggacacagtcaagccagcaaggagctcaccatcagcacag
aggaagcacagccggatggtcctcctatggaggttttcctccagcctatgacatcgcaga
gcatccgcgtcacctggaaggcccccaggaaggagcttcagaacggggtgatccgggggt
accagatcggttaccgtgagaacgggccgggcagtaacggccagtacagcatcgtagaga
tgaaggctactggggacagtgaggtgtacaccctggacaacctgaagaagtttgcccaat
atggagtggtggtccaggccttcaacagggccggcacaggcccctccagctctgagatca
acgctaccacactggaagatgtgcccagccagccgccccagaacgtgcgggccatctcgg
tgacatcagacgaggcggtaatcacgtgggcggagcccccgcgtctgacactgcacggcg
tgctgaagggttaccgtgtggtcttctggtccctcttccccgacggagaatggggagaga
tgcagaacatcacgacatctcgtgagcaggtggagctgagagggctggagaagtttacta
attacagtgtgcaggtgctggcctacacacaggctggggacggtgtcaggagcaatgtgc
tgtacatccagacccgcgaggaccaccctggccccccggctggcatcaaagctgtgccct
catccaccagcagtgtggtggtttcctggctacccccgcacaagcccaatggaatcatcc
gcaagtacaccatctactgctccagccccggatcaggccaaccggcccccagtgagtacg
aggccaaccccgagctgctgttctaccgggtcacccacctgaaccgcggacagcagtacc
tcatctgggccgccgccgtcaccaccgccggacggggaaacatcagcgacaaggtcactg
tggagcctgctgggaaggccccagctaagatcctatcgttcggaggtacagtgaccactc
cctggatgaaggaggtgaggctaccctgcagctcagtgggcgaacccacccccaccatca
aatggaccaaagacagtgaggacacagccatcccggtaactctggacggtcagaggctca
tcatggccaatggcacgctggtcctgcgctcggtgaaagctgaggattctgggtactaca
cgtgcacggccaccaacacgctgggctttgacaccatcattgtcaacctgctggtgcaag
ttcctccagaccagccccgtctgactgtctccaccacctccacctcctctatcaccctgg
cctggatccctggggacaacggaggatcctccatcagaggtttcgtgctgcagtactcgg
tggacaacatggagggttggagggatgtgttcatcagttccagtgagaggtccttcaagc
tggacaacctacgctgtggcacctggtacaaggtcaaactggccgccaagaacagcgtgg
gagcgggacgcatcagtgaaatcatcgaggctaagacccacggacgagagccccagttca
ataaggaccatcctgtgttcacccacgtcaactctacccacgcccggctcaacctacagg
gctgggcgagcggtggctgccccatcacggccgtgctgctggagttcagacctaagggga
actgggcgtggcagaatgttcgcaccaacgccaccgccgacgtgttcctggctgagctcc
gcgaggccacctggtacgaactgaagatgaaggcgtgtaacagcgccggctgtgggaacc
agagctctcagttcgccacgctggactacgacggcagtaccatccctcccatcaagtcag
cgcggcccgaaggcgacgacgttaagaagctcttctccattggctgccccgtcatcctgg
tcactctggtcgtcgccctgctctttgtcatccgcaagaaacgcaaagagaagagactga
agagactgagagatgccaaaagcctggctgagatgctgatcagtaagaataaccggagct
ttgacacccctgtgaaggggcccccccagggcccccgacttcacatcgacatccccagag
tccagctgctcatcgaggataaggaaggcatcaaacagatcggtgaagacaaagccacca
tcccagtgacggacacagagttcagccagaacatgaatccacagagcttctgtacgggcg
tgtctgtgcatcaccccgccctcatccagaacaccggccctctgattgacatgtctgaca
tcagaccagggacaaacccggtgtcgaggaagagcgtgaagtccacccacagtacgagga
accgctactccagccagtggaccctgaccaagtgccagtcgtccacgcccgcccgtaccc
tcacctccgactggcgcaccgtgggctcccagcatggcatcgccgtcaccgagagcgaca
gctacagcgccagcctctcacaggacacggataagggacgtaacagcatggtgtccacag
agagcgcgtcctccacctatgaggagctggcgcgggcctacgaacacgccaagcttgagg
agcacctgcagcacgccaagtttgagatcaccgagtgcttcatctccgacagttcctcag
accagatgaccacgggcaccaacgacaacgccgacagcatgacctccatgagcaccccgt
ccgaaacgggcctgtgtcgcttcaccgcctcgccacccaaaccccaggactacgaccgcg
gcagacctaccaacgttgccgtgcccatcccccaccgcgccaacaagagcgagtggacgg
gcaaaagtgactactgtaaccttcccctctacatgaagacagaccctttcttccggaagc
agtcggagctgcgtgacccgtgcccggtggtgccgccccgcgaggcctccatccgcagcc
tggcccagcgggcataccactcccagggccgccacatgactctggactcctccaagcagc
agcaggctctgactgtgggccacgctggcctggccggcctcggcgcctcaggaggatcat
cagggggtggaagcggtggtgctgtaggagggacaactggagggccgtctggtggttcca
gcacctcctccctgccccagaggactctcaccatgcccggctcctcctcttcctctgccc
agagcgctgcagccgctaccgacgcagccagcgggggagccacggggggagagtccagag
actctctgctggagagcagctcatcaggcctgggcagactagacagacagaagcaggcgg
ctggcggggcctattccaaatcttatacactggtgtag
DBGET
integrated database retrieval system
