Salmo trutta (river trout): 115205993
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Entry
115205993 CDS
T08542
Name
(RefSeq) spectrin beta chain, non-erythrocytic 4-like isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
stru
Salmo trutta (river trout)
Pathway
stru04517
IgSF CAM signaling
stru04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
115205993
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
115205993
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
stru04812
]
115205993
Cytoskeleton proteins [BR:
stru04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
115205993
Intermediate filaments
Intermediate filament-binding proteins
115205993
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
Helical_needle
TMP_3
Motif
Other DBs
NCBI-GeneID:
115205993
NCBI-ProteinID:
XP_029628341
Ensembl:
ENSSTUG00000002920
LinkDB
All DBs
Position
13:complement(52868116..52936350)
Genome browser
AA seq
2752 aa
AA seq
DB search
MANASTDLDNAEAQRQLNNNNTRLASSSGHWETEVTSSKLFECSRIKALAEERDAVQKKT
FTKWVNSHLARVSCRIADLYNDLRDGYMLTRLLEVLSGEMLPRPTRGRMRIHCLENVDKA
LQFLKEQRVHLENVGSHDIVDGNHRLTLGLIWTIILRFQIQVIKIECDDNRETRSAKDAL
LLWCQMKTAGYSEVHIQNFTTCWRDGLAFNALIHRHRPDLIEFHKLIRSNATHNLQQAFN
IAEQNLGLTKLLDPEDVNTENPDEKSIITYVVSYYHYFSKMKALRVEGKRVGKVLDNAID
GQKMIDRYEALASELLEWIEKTIGIISNQKFANSLTGVQQQLQAFTTYCTIEKPIKFQEK
GNLEVLLFTIQSKLRANNQKPYVPHEGKLISDINKAWERLEKAEHERGVALRQELIRQEK
LELLAQRFDHKTTMRQAWLNENQRLVSQDNFGYDLPAVEAAMKKHEAIEADISSYEERIG
VVVELAGEMETEGYYDIRRISARKENILGQWSLLKELVVGRKARLEKNLALQKTFQDMVY
MIDWMEDMQVQLLSKDFGKHLLQVDDLLQKHSLQEADITAQADRVQTLNSAALIFTTIEG
YQPCDPQVICNRVNHVSTCLEELKQLAAKRRSELEESQHLWAFFQEVEESEAWIREKSSI
LVTQTCGKDLSSVLRLLQKHKTLAGELLAHRSLLQQTMKKGKQILMEKSFGTGGIQERIM
EVKGEWKRLEDQAAQRLGHLQEALNFFQFSTETDDLLAWLQDAYRLVSSEDFGHDEYSTQ
SLLKKHRGVCEAVDKHRMHVVTLRKHMVALPLHYRELDEVQSRMGEAEQLYAEVAEVAVL
RQQWLHDALAVYLMFSEVNACEVWIDEKEQWLNKMEVPERLEDVEVIAHRFESLDQEMNS
LMGRILDVNQIVQQLLDSDHPSSTEVRGCQDHLNSRWNRIVEMVEQKKDHLDSVLRLQNY
LLECAEIKSQIQEKRKAIDATQYVGSDLGGVLALQRRLSTMEGALAVLEPKLLHLQQEAE
ELAISHPAKAMEVLEHFEGISVEWEELKRTLQGCEDSLMVAGRLQQFIQDLDSFLTWLVQ
TQTAAASDELPNALEEAERLINRHAALKEEIGRYEEDYERLQAVNELLETEEAPLPYAAL
QQWLQKLDVGWNKLLEMWESRREVLVQAHIFHLFLRDVKQAEAFLNNQESALAHVELPTT
VETVEAAIKKHKDFTTTMELNLHRIKAVIEAGESLISQSNIYSDRIKERVDTLANRGNQN
RELAQQWLERLNGQWGLQRLLQDCHELGDWVAEKMLMARDTSRDETQKLHKKWLKHQAFM
AELVQNKEWLEKIEREGQQLIQEKPELSPVVRRKLGEIRECWQDLESTTQAKARQLFEAN
RADLLVQSYTSLDHRLHQLEGQLGYVDQGQDLTSVNKQLKKLQTMERQMEEWYAEVGELQ
VAAASIPQQGQVMDTVGERQAAVETRIVRLIEPLKERRRILLASKEVHQVGRDLEDEILW
VQERLPAAASQEHGSSLQAVQHLMKKNQTLQRELQGHRARVEDVLERANVIASIRSPEAD
CVRAGLEQLSGLWNLLWAETERRQLVLDSMYQAQQYYFDTAEVEAWLSEQELHMMNEEKG
KDEPSTLQLLKKHLVLEQTIEDYAETIGLLSQQCRQLLEMGHPDSEQISKCQSQMDRLYV
SLKDLVEERKSRLEQQYWLYQLNHEVDELEQWIAEREVVASSPELGQDFEHVTILQEKFT
EFASETGSLGQERVTAVNQMVDELIDYGHAEASTIAEWKDGVNEAWADLLELMETRAQML
AASHQLHKFFTDCREILAQIDDKQRRLPEVRARQGGTANTSTLQRLMHSFEHDIQLLVTQ
VRQLQESAGQLRTIYAGQKAEAIAGREQEVMHCWKELLTSCEECRVQITTATDKLRFFGV
VRDQIMWMDSIISQIGTGDNPSIPHSDITGSGLSGPFRDVSSVEVLMNYHQSLKSEVEAR
SKSVLQCIEMGKTLLAARNPAAEEIKEKLDKVVAKQYELSEKWDKHWEVLQHMLEVHQFA
QEAVVAEAWLTAQEPFINSKELGASVDEVEQLIRRHEAFRKAAATWEERFSSLRRLTTVE
KMKAEQSKLPPTPLLGRKVFLDPQETSPARSQGSPLMRRIIYEQTEHRAERPSQEPLPSS
VARRLGSTVANYTPIMNGSSGYRSSLEAWAIPVMGGVAGGVVGVAAGLGTTAMEARGVAT
NLGTTTAMEVRGVAAGLGTAASEARGLAVGLVTPAVEAKGIAASLVTGAATAVEVKASQY
LRQPKIKHMDDMVTPMLVACRLEKVREKEVREKEAREREQRERERDIVLMEPAPVMPVMA
EVVLQEMGREGMGRERLNSEPSSRDHRAGSSRSEPQQRDRDRDSRDSRDSHREARLERQH
SSEVLMIQARRDELPQEVWRERAERKEKKLERQTSSEQEGHGHEGRRKDRHRTERQESSE
HDTAKEQSDRRSTEKRSGGQTLFDIVEQLKEREAATARGEVPKVPNGVPEKSSGRPDRPR
ARDRPKPRRRPRPKDPSAGEATTRRSRSAPEPGMAQSVSPSVPQPPSHTAHHEGFLFRKL
DIETMRKSSNSRSWVNLYCVLNKGEIGFYKDAKNTTTPYNNEPMLNLGHCHCDVTLGYKK
KKNVFTLKTKDGSEFLFHAKDESQDDLKGWTTNINKSIAEHVEIAKWGQPQPTTSSTDEG
TRRDGSKADNKSERGEKSDRGERPERVERSERSDKGETKSDTKRSEKSSKKK
NT seq
8259 nt
NT seq
+upstream
nt +downstream
nt
atggccaatgcctccacagacctggacaacgcggaggcccaacgccagctcaacaacaac
aacacccgcctggccagcagctcgggacactgggaaactgaggtcaccagctccaagctg
tttgagtgttcccgcatcaaggccttggcagaagagagagatgctgtccagaagaagacc
ttcactaagtgggtgaactcccacttggcaagagtgtcctgtcgaatcgctgacctctac
aacgacctccgggacggctacatgctcaccaggctgctggaggtcctgtctggggagatg
ctgccgaggcccacgcggggtcgcatgcgtatccactgcctggaaaacgtggacaaggcc
ctgcagttcctcaaggagcagagggtccacctggagaacgtcggctctcacgacatcgtc
gacggcaaccaccgcctcacccttggcctcatctggaccatcatccttcgcttccagatc
caggtgattaagattgagtgtgacgacaacagggagacgcggtcggcaaaggatgccctg
ctactctggtgccagatgaaaactgctgggtactctgaggtccacatccagaacttcacc
acctgctggagagatggtctcgccttcaacgctctcattcaccgacacaggcctgatttg
attgaattccataagctgatccggtcaaatgccacacacaacctccagcaagccttcaac
attgctgagcagaacctggggctcaccaaactcctggaccctgaagacgtgaatacggag
aacccagatgagaagtcgataataacctatgttgtgtcctactaccattacttctccaag
atgaaagcccttcgagtagagggcaagagagtgggaaaggtgttggacaatgccattgat
ggtcagaagatgatcgatcgatatgaggctctggcctcagagctcctggagtggatcgag
aagaccataggcatcatcagcaaccagaagtttgccaactccttaacgggtgtccagcaa
cagcttcaagccttcaccacctactgcaccatcgagaagcccatcaagttccaggagaag
gggaacctggaggtgctcctctttactatccaaagcaagctcagagctaacaaccagaaa
ccatacgtgcctcatgaagggaaactcatctctgatatcaataaggcgtgggagaggctg
gagaaggcggagcatgagagaggcgtggccctacgtcaggagctgattcgccaggagaag
ctggagctgctggcccagcggtttgaccacaaaaccaccatgagacaggcgtggctcaac
gagaaccagcgcctcgtgtctcaggataactttggctatgacctgccagcggtggaggcc
gccatgaagaagcacgaggccattgaggcggacatctcgtcgtacgaggagcgcatcggg
gtggtggtggagctggctggggagatggagacggagggctactacgacatccggcgcatc
tcggcccgcaaggagaacatcctgggccagtggagcctgctgaaggagctggtggtgggg
aggaaggcccggttggagaagaacctggctctgcagaagaccttccaggacatggtctat
atgatcgactggatggaggacatgcaggtccagctcctgtccaaagacttcggcaagcat
ctgctgcaggtggacgacctgctgcagaaacacagcctccaggaagctgacatcacagcg
caggcagatagggtgcagacccttaactcagccgctctcatattcaccaccatcgaaggc
taccagccctgtgacccccaggtgatctgcaaccgggtcaaccatgtcagcacctgcctg
gaggagctcaagcagctggcggctaagcggcgctcggagctggaggagtctcagcacctc
tgggccttcttccaggaggtggaggagtctgaggcctggatccgcgagaagagctccatc
ctggtcacccagacctgcggcaaggacctgagcagcgtgctgcggctgctccagaaacac
aagaccctggctggggagctgctggcccaccgctccctcctccagcagaccatgaagaag
ggcaagcagatcctgatggagaagagttttggcacagggggcatccaggagcgcatcatg
gaggtgaaaggggagtggaagaggctggaggaccaggcggcgcagagactgggccacctg
caggaggcactcaatttcttccagttcagcacagagacggacgatctgctggcctggctg
caggacgcctaccgcctggtttccagcgaggactttggccacgatgagtactccacccag
tcactgctcaagaagcaccggggtgtgtgcgaggctgtggacaagcaccggatgcacgtg
gtaactctgcgcaaacacatggtggcgttgccactgcactaccgggagctggacgaggtg
cagtcgaggatgggcgaggcggagcagctgtacgccgaggtggccgaggtggccgtcctg
agacagcagtggctgcacgatgcgctggccgtctacctcatgttcagtgaggtcaacgcc
tgcgaggtgtggatcgacgagaaggagcagtggctcaacaagatggaggttccagagagg
ctggaggatgtggaggtcatagcccacaggtttgagagcctggaccaggagatgaacagc
ctgatgggaaggatcctggacgttaaccagatagtgcagcaactcctggatagtgaccac
cccagctctacagaggtcagaggctgtcaggaccacctcaacagcagatggaaccgcatc
gtggagatggtggagcagaaaaaggatcacctggactctgtcctccgtctccagaactac
ctgctggagtgtgctgagatcaagtcccagatccaggagaagcgcaaggccatcgacgcc
actcagtacgtgggcagtgacctgggcggggtgctggccctgcagcgccgactctccacc
atggagggggccctggctgtgctggagcccaagctgcttcacctgcagcaggaggcagag
gagctggccatctcgcacccggccaaggccatggaggtcctggagcacttcgagggcatc
agtgtggagtgggaggagctgaagcgcacgctgcagggctgcgaggactctctgatggtg
gcggggcggctgcagcagttcatccaggacctggactccttcctgacgtggctggtgcag
acgcagacggcggcagctagcgacgagctgcccaacgcgctggaggaggccgagaggctg
atcaaccgccacgcggcgctgaaggaggagatcgggaggtacgaggaggactatgagcgt
ctgcaggcggtcaacgagctgctggagaccgaggaggctccgctgccatatgcggcgctg
cagcaatggctccagaagctggatgtgggctggaacaagctgctggagatgtgggagagc
cggagggaggtgctggtgcaggcgcacatcttccacctcttcctgagggacgtcaagcag
gccgaggccttcctcaacaaccaggagtcagccttggcccatgttgagctccccaccact
gtggagacggtggaggctgccatcaagaaacacaaggactttaccaccaccatggagctc
aaccttcatcgcatcaaggctgtcatcgaggccggagagagcctcattagccagagcaac
atctactcggaccgcatcaaggaacgtgtagacaccctcgctaacagaggaaaccagaac
cgggaattggcccaacagtggctggagaggctcaacggccagtgggggctccagaggtta
ctacaggactgccacgagcttggagactgggtggcagagaagatgctcatggctcgtgac
acgtcccgcgatgagacgcagaagctgcacaagaagtggctgaagcaccaggccttcatg
gccgagctggtccagaacaaagagtggctggagaagatcgagagggagggccagcagttg
atccaggagaagcccgagctgagcccggtggtgcggaggaagctgggggagatccgggag
tgttggcaggacctagagagcaccacccaggccaaggcccgccagctgtttgaagccaac
cgggccgacctgctggtgcagagctacaccagcctggaccatcggctgcaccagctggag
ggacaactgggctacgtggaccagggtcaggacctgactagcgtcaacaagcagctcaag
aagctccagacgatggagcgtcagatggaggagtggtatgcggaggtgggggagctgcag
gtggcggcggcctccatcccccagcagggccaggtcatggacacggtcggcgagcgccag
gccgccgtggagacgcgcatcgtccgcctcatcgagccgctcaaggagcgccggcgcatc
cttctggcctccaaggaggttcaccaagtgggccgggacctggaggacgagatactgtgg
gtgcaggagcggctgcctgccgccgcgtctcaggagcacggctccagtctacaggctgtg
cagcacctcatgaagaaaaaccagactctgcagagggagctgcagggccatcgggcgagg
gtggaggatgtcctggaacgagctaatgtcatcgcctccatccgcagccccgaggctgac
tgtgtgcgggcgggcctggagcagctcagcgggctgtggaatctgctgtgggccgagaca
gagagaagacagctggtgctggattccatgtaccaggcccagcagtactactttgacacg
gccgaggtggaggcctggctcagcgaacaggagctgcacatgatgaacgaggaaaagggc
aaggatgagcccagcaccctgcagctactgaagaagcacctggtactggagcagacgata
gaggactacgctgagacgataggccttctctcccagcagtgcagacagctactggagatg
ggacatccagacagtgagcagatcagtaagtgtcagtctcagatggaccggctgtacgtg
tcactgaaggacctggtggaggagaggaagtctcgtctggagcagcagtactggctctac
cagctcaaccatgaggtggacgaactggagcagtggatcgctgagagggaggtggtggcc
agctcgccagaactgggacaggactttgaacacgtcacgatcctgcaggagaagttcaca
gagtttgcgtcggagacgggcagtctgggtcaggagcgtgtgacggcggttaaccagatg
gtggatgagctgatcgactacggccacgccgaggcctccaccatcgccgagtggaaggac
ggcgtgaacgaggcctgggccgacctcctggagctcatggagacccgggcacagatgctg
gccgcctcgcaccaactccacaagtttttcaccgactgccgcgagatcttggcccaaatt
gatgataagcagcggaggctgcccgaggtgcgggcacgccagggtggcactgccaacacc
agtaccctgcagaggctcatgcacagcttcgaacacgacatccagctgctcgtcactcag
gtgaggcagctccaggagagtgcgggtcagctccggaccatctacgccgggcagaaggct
gaggccatcgccggccgggaacaggaagtgatgcattgctggaaggagctcttgacgtcc
tgtgaggagtgccgagtgcagatcaccacggcaacagacaagctgcggttcttcggggtg
gtgcgagaccagatcatgtggatggacagcatcatctctcagatcggcacaggggacaat
ccaagcattccccacagcgatataacgggctctggactctctggtcctttcagggatgtg
tcctcagtggaggtactgatgaactaccaccagagcttgaagagcgaggtggaggcacgc
agtaagagtgtgctgcagtgcatcgagatgggcaagacgctgctggccgctcgcaaccct
gctgctgaggagatcaaggagaagctggataaagtggtggccaagcagtacgagctgtct
gagaaatgggacaaacactgggaggtcctgcagcacatgctggaggtgcaccagtttgcc
caggaagcggtggtggccgaggcatggctcacggcccaggagcccttcatcaacagcaag
gagctgggtgccagtgtggacgaggtggagcagctcattcgccgccacgaggccttccgc
aaggctgccgccacctgggaggagcgcttcagctcactacgacgcctcaccacggtggag
aagatgaaagcagagcagagtaagctccctcccacccccctgctgggtcgaaaggtgttc
ctggacccccaggagacgtcccctgcccggagccagggctcccccctgatgagacggatc
atttacgagcagaccgagcacagagctgaaaggccctcccaggaacccttgccctcctct
gtggcccgccgcttgggatccaccgtggccaactacacccccatcatgaacggctccagt
ggctaccgcagcagcctggaggcctgggccatccccgtgatggggggagtggctggaggt
gtagtgggggtggcagccggcctgggaacaaccgccatggaggccagaggggtagcaaca
aatttagggaccacaaccgccatggaggtccgaggggtggcagcagggttggggactgcc
gcctcagaagccagagggttggcagtaggattggtcacccccgcggtcgaggccaaaggg
atagctgcaagcttggtgactggtgcagccacggcagtggaggtgaaagcctcacagtac
ctccggcagcctaagatcaaacacatggacgacatggtgacgcccatgctggtggcctgt
aggctggagaaggtgagagagaaggaggtgagggagaaggaggcgagagagagggagcag
agagagagggagagagatattgtgttaatggagccagcgccggtgatgccggtgatggcc
gaggtggtactccaggagatggggagggaggggatgggcagggagaggctgaatagcgag
cccagcagcagagaccaccgggcggggagcagccggtcagagccccagcagagagacagg
gacagagacagtagggacagtagggacagtcacagggaagccaggctggagcgccagcac
tctagtgaggtgctgatgatccaggcgcggcgggatgagctgccccaggaggtgtggcgg
gaacgggccgagcgcaaagagaagaagctggagaggcagacgtccagcgagcaggagggc
cacggacacgaaggccggaggaaagaccgccaccggacggagagacaagagtccagtgaa
cacgacacagccaaggagcagtcagacagacgttctacggagaaaaggtcaggcggccag
accctgtttgacatagtggagcagctaaaagagagagaggcagcaacggcccgaggggag
gttcctaaagtgccaaacggcgtgccagagaagtcttccggacgtccagatcggccgcga
gcacgggaccgccccaagccccggcggagacccaggcccaaggacccatctgcaggagag
gccaccacccggcggtcacgctcggcgccagagccagggatggcccagagcgtgagcccc
tcagtcccccagccgcccagccatacagcccaccacgagggcttcctcttccgcaagctg
gacatcgagaccatgaggaagagctctaacagcagatcctgggtcaacctgtactgtgtg
ctgaacaaaggagagataggcttctataaggacgctaagaacaccaccacaccttacaac
aatgagcccatgctcaacctcggccactgccactgcgacgtcacccttggatacaagaag
aagaaaaacgtctttacacttaaaacgaaagacggaagtgaatttctgttccatgcaaag
gatgagtcacaggatgatctaaagggctggaccaccaacatcaacaagagcatcgcagag
catgtggagattgccaaatggggtcagccccagcctactacctcatccacggacgagggc
acgcgccgcgacggcagcaaggccgataacaagtcagagcggggagaaaagtcagaccgg
ggggaaaggccggagagggtcgagcgctctgagaggtcggataagggtgagaccaaatcg
gacaccaagcgttcagaaaagtccagcaagaagaaatga
DBGET
integrated database retrieval system
