Salmo trutta (river trout): 115206004
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Entry
115206004 CDS
T08542
Name
(RefSeq) RNA-binding protein Nova-1-like isoform X1
KO
K14944
RNA-binding protein Nova
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
stru03041
]
115206004
Spliceosome [BR:
stru03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
115206004
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH-I_KHDC4-BBP
KH_2
KH_KhpA-B
KH_NusA_2nd
DUF1233
Motif
Other DBs
NCBI-GeneID:
115206004
NCBI-ProteinID:
XP_029628363
Ensembl:
ENSSTUG00000003222
UniProt:
A0A673WEE1
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Position
13:complement(53097948..53155579)
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AA seq
523 aa
AA seq
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MMAGGAVQQNGIFLNPHHHNQQPHMESDPPDSRKRPLETPTEASSTKRTNTGVAFLQPLF
ETEGIVFPHQESHSEAHEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKS
KDFYPGTTERVCLIQGTVEALNGVHNFIAEKVREMPQSTQKSEPVSVMQPQTTVNPDRIK
QAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTISGEPEQNRK
AVEIIVQKIQEDPQSSSCLNISYSNISGPVANSNPTGSPYANSAEVNPAAAAAAAATASS
LLGQATMQSMGGFPTTMGPSFSGNDLLTITSALNTLASYGYNTNSLGLGLNPAAASGVLA
AVAASANPAAAAAANLLASYASDASTSAGHQAASLGGFTLGSLAAATGATNGYLSASSPL
MAQSLMATEKQMQEGAKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFI
PGTRNRKVTITGSPASTQAAQYLISQRITYEQGVRATNPQKVG
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgatggccggcggggcagtacaacaaaacgggattttcttgaatcctcaccatcacaat
caacagccgcacatggagtcggatccccccgattcgcgtaaaagaccgctagagacccca
accgaggctagcagcactaaacgcacaaacacgggagtggccttcctgcagccccttttt
gaaactgaaggcattgtattccctcaccaggaatcacactctgaggcacatgaggaaggt
gagtacttcctgaaggtgctgatccccagctatgcggccggctccatcatcggcaaggga
ggacagaccatcgtccagctgcagaaagagaccggcgccaccatcaaactgtccaaatcc
aaagacttctaccctggcacgacagagcgggtgtgtctgatccaggggacagtggaggct
ctgaatggagtccataacttcattgctgagaaggtgcgggagatgccacagagcacccag
aaatccgaaccggtcagcgtaatgcagccacagaccaccgtcaaccctgaccgcatcaaa
caggccaagctgatagtaccaaacagcacagcaggtctgatcattggtaaaggtggagcc
acagtcaaggccgtcatggagcagtcaggcgcctgggtgcagctctcacaaaaaccagag
ggcatcaacctgcaggagcgcgtggtcaccattagcggagagcccgagcagaaccgtaaa
gccgtggagatcatcgttcagaagatccaggaggacccccagagcagcagctgcctcaac
atcagctactccaacatctctggccctgtggccaactccaaccccaccggctctccctac
gccaactcagccgaggtgaaccccgctgctgctgctgccgccgctgccacagcctccagc
ctcctgggtcaggccaccatgcagagtatgggtggcttccccaccacaatgggtcccagc
ttctcaggcaacgacctcctgaccattacctctgccctcaacacgttagccagctacggc
tacaacaccaactccctgggactggggctcaaccccgccgcagcctcaggagtcctggcc
gccgtagcggctagcgctaaccctgctgcggctgccgctgcaaacctcctggcatcctac
gccagcgatgcctccaccagcgcaggccaccaggccgcctccctgggaggcttcaccctg
ggctcgctggccgcggccactggggccaccaacggctacctgagcgcctcatccccgctg
atggcacaatccctgatggccactgagaagcagatgcaggagggggccaaggacgtggtg
gagatcgctgttcccgaaaacctggtaggagccatcttggggaaaggagggaaaacgcta
gtggagtaccaggagctgactggagcccggatccagatctccaaaaagggagagttcatt
cccggcacccggaaccgtaaagttaccataaccggctctccggcgtcaacgcaggcagct
cagtatctgatcagccaacggatcacgtatgagcagggtgtgcgcgccaccaacccacag
aaggtgggatag
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