Salmo trutta (river trout): 115206143
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Entry
115206143 CDS
T08542
Name
(RefSeq) E3 ubiquitin-protein ligase TRIP12-like isoform X1
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
stru
Salmo trutta (river trout)
Pathway
stru04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
115206143
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
stru04121
]
115206143
Enzymes [BR:
stru01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
115206143
Ubiquitin system [BR:
stru04121
]
Ubiquitin ligases (E3)
HECT type E3
115206143
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WWE
Motif
Other DBs
NCBI-GeneID:
115206143
NCBI-ProteinID:
XP_029628637
Ensembl:
ENSSTUG00000002290
LinkDB
All DBs
Position
13:57601262..57653089
Genome browser
AA seq
2065 aa
AA seq
DB search
MSNRPNSNPGGSLRRSQRNTAAAQPQDHTVAGRLQSEQVKHKTNSPPESRRPKSKASKAA
PSSASGQSRGHSSRSSSLSLSVASFVLQDDPEAAGTSEREPTGHQSKSEGTTRGLKRSSA
PDLNNTYTPTPAKKSKSHPPPRDHTTEAKKGPAKSSKKRPLAPELPAPTGRGQSSKSGAS
GASPTQKRKKADSLPGLSSTAGSLPNRTDGRSAKPTKLASKSAASAKAGCSTVTDSSSSA
STSSSSSTGANSATATQGARLKQGKDQNKARRSRSASSPSPRRSTRDREQAKAAVSSKFE
WASRFSPKVNLPKPKLSLPGSSKTESTSKPGPSGLQAKLASLRKSTKKRSESPPAELPSF
RRSTRQKTTGSCASTSLCSRRGSGLGKRGAADARRQEKMADSDNNQDGANSSAARTDEAP
QGASGTASSSVAGAVGMTTSGESESDDSEMGRLQALLEARGLPPHLFGPLGPRMSQLFHR
TIGSGASSKAQQLLQGLQATGDESQQLQAAIEMCQLLVMGNEETLGGFPVKSVVPALITL
LQMEHNFDIMNHASRALTYMMEALPRSSAVVVDAIPVFLEKLQVIQFIDVAEQALTALEM
LSRRHSKAILQAGGLADCLLYLEFFSINAQRNALAIAANCCQSITPDEFHFVSDSLPLLT
QRLTHQDKKSVESTCLCFARLVDNFQHEENLLQQVASRDLLTNIQQLLVVTPPVLSSGMF
IMVVRMFSLMCSNCPCLAVQLMKQNIAETLRFLLCGAANGSCQEQIDLVPRSPQELYELT
SLICELMPCLPREGIFAVDLMLKKGSAQATEGAIWQWRDDRGLWHPYNRIDSRIIETAHQ
NGEDEISLSTLGRVYTIDFNSMQQINEDTGTARGIQRKPNPLANPTTGGHQEVRREDARA
QLMKEDPELAKCFIKTLFGVLYEVYSSSAGPAVRHKCLRAILRIIFFADAELLKDVLRNH
AVSSHIASMLSSQDLKIVVGSLQMAEILMQKLPDVFSVFFRREGVMHQVKNLAESEAFLT
SPPKACTSGTASLCTTTISTATTTAASNATPDLGSPSFQHSMDDSLDLSPQGRLSDVLKR
KRLPKRGPRRPKYSPPRDDDKVDNQAKSPTTTQSPKSSFLASLNPKTWGKLGAQTNSTNS
EPSRTAGVSGLARAPPKDSVSNNRDKIKAWIKEQACKFVARYFNTEKIDGSNPALNVLQR
LCTATEQLSLQMDGGVECLVEICSIVSESDVSSFEIQHSGLVKQLLLYLTSSSDRDLVSR
DVRLKRFLHVFYGCPIPGMEPAGRLEPSENGPLLSLVHKMNNCLSQMEQFPVKVHDFPSG
NGNGSRGSQALKFFNTHQLKCQLQRHPDCTNVKQWKGGPVKIDPLALVQAIERYLVVRGY
GRIREEDEDSDDDGSDDEIDESLAAQFLNSGSVRHRLQFYIGDHLLPYNMTVYQAVRQFS
LQSEEERESTDDEANPLGRAGIWTKTHTIWYKPVRDDEDGTKDAVGGKRGRAQTAPTKTS
PRNAKKQDELWHDGVCPSVASPLEMYLMSEPPESITFDDPSLDVNLLLRVLHSISSYWFY
LYDNAVSKEIIPTSEFINSKLTAKANRQLQDPLVIMTGNIPTWLTELGKTCPFFFPFDTR
QMLFYVTAFDRDRAMQRLLDTNPEINQSDSQDSRVAPRLDRKKRTINREELLKQAESVMQ
DLGSSRAMLEIQYENEVGTGLGPTLEFYALVSQELQRADLGLWRGEEVTLSNPKGSQEGT
KYMFSSRGLFAVPFGRTTKPAHIAKIKMKFRFLGKLMAKAIMDFRLLDLPLGLPFYKWML
RHETSISSHDLVNIDPGVAKSIQHLEDIIRQKKRLEHDLSQTRETLQQALESLNMNGCSV
EDLGLDFTLPGFPNIELKKGGKDVPVTIYNLEEYLRLVVYWTMNEGVSRQFESFREGFES
VFPLHHLQYFYPEELDQLLCGSKSETWDVKTLMECCRPDHGYTHDSRAVRFLFDVLSSFD
AEQQRLFLQFVTGSPRLPVGGFRSLNPPLTIVRKTFESTENPDDFLPSVMTCVNYLKLPD
YSSIEIMRKKLLIAAREGQQSFHLS
NT seq
6198 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaccggcctaattccaatccaggggggtcactgcgccgttcacagaggaacact
gctgcggcccagccacaagaccatacagtcgcgggaaggttgcagtcagagcaggtaaaa
cataaaacaaattcccctcctgaaagtagaagacctaaatctaaggcttccaaagccgca
cccagctcagcctctggccagtccagggggcacagctcaagaagtagcagtctgtcactg
tctgtggcttcatttgtgctgcaagacgacccagaggccgcagggacatcagagcgagag
ccaacaggccaccaatccaagagtgaaggcaccacccgagggttgaagagaagttctgca
cctgacctcaacaacacctacacccccaccccagccaagaagtccaaatcccaccctcca
cccagagaccataccactgaggccaagaaaggccctgccaagtcctccaagaagagaccc
ctggctccagagttgcccgcgcccacaggccgcggccagagcagcaagagcggggcctct
ggggcctcaccgacccagaaacggaagaaggctgactccctccccggtctgagcagcact
gctgggtccctccccaaccgtaccgacggcagatctgcaaaacccaccaagctggcgtcg
aaatcggccgcctcagccaaagctgggtgtagcaccgtgactgactcctcctcttctgcc
tccacctcttcctcctcctccaccggcgccaacagtgccaccgccacgcagggcgccagg
ctcaagcagggcaaagaccagaacaaggcacgtcgctcccgctccgcctccagcccttcc
ccacgccgaagcacccgcgacagggagcaggccaaagccgcagtctcgtccaagtttgag
tgggcctcccgcttcagtcccaaagtcaacctgccaaagcctaaactgtccctacctggc
tcctccaagaccgagagcacctccaaacctgggccctcaggactacaagccaaactagca
agtttgaggaagtccactaagaagcgcagcgagtctcctccagcagagctccccagcttt
cggcggagcacacgtcagaagaccacgggctcctgcgccagcaccagtctgtgcagtcgg
cgaggctcaggcctgggcaagcgcggggcagccgacgctcgccgacaagagaagatggcc
gactcggacaacaaccaggacggggccaactcctcggccgcccgcactgacgaggccccg
cagggggcttcaggtacagcttctagttcagtggccggcgctgtagggatgaccacatcc
ggtgagagtgagtccgatgactctgaaatgggcagactccaagccctgttggaggccagg
ggtctacccccacacctctttgggcccctgggaccccgtatgtcccagctgtttcacaga
accataggcagtggagccagctccaaggctcagcagctgctgcagggcctgcaggccacc
ggtgacgagtcccagcagctccaggccgccatcgagatgtgccagctactggtgatgggc
aacgaggagacgctaggaggcttccctgtgaagagtgtggtgcccgcgctgatcacattg
ttgcagatggagcataattttgacattatgaaccacgcctcccgtgctctcacttacatg
atggaggcgctgcctcggtcctctgctgtggtcgtggacgccatccccgtcttcctggaa
aagcttcaggtgatccaattcattgatgtggcggagcaggccctgacagccttggagatg
ttgtcaaggcgtcacagcaaagccatcctgcaggctggtggcctggctgactgtctgctg
tacctggagttctttagcatcaacgcccagaggaacgccctggccattgccgccaactgc
tgccagagcatcacccctgacgagttccactttgtctctgactctctgccactgctgacc
cagagactcacacaccaggataagaaatctgtcgaaagcacttgtctctgttttgccaga
ctggtggataactttcaacacgaggagaaccttctgcagcaggtggcctcgcgggacctg
ctgaccaacatccagcagctgctggtggtcaccccgcctgtgctcagctcgggcatgttc
atcatggtggtgcgcatgttctccctcatgtgctccaactgcccctgtctggccgtgcag
ctcatgaagcagaatattgcagagacgctgcgcttccttctgtgcggcgcggccaacggt
agctgccaggagcagattgacctggtgccccggagcccacaggagctctatgaactcacc
tcactcatctgcgagctaatgccctgccttcctagagagggcatctttgctgtggacctc
atgctgaagaagggcagtgcccaggccacagagggtgccatctggcagtggagggacgac
cggggcctgtggcacccctacaaccgcatcgacagtcgcatcattgagacggcccaccag
aacggagaggacgagatcagcctgtccaccctgggccgcgtctacaccatcgacttcaac
tctatgcagcagatcaacgaggacactggcacagcacggggtatccagaggaaacccaac
cccttagccaaccccactactgggggtcaccaggaggtgaggcgggaggatgcacgggcc
cagctgatgaaggaggaccctgagctggccaagtgcttcatcaagaccctgttcggggtg
ctgtacgaggtgtacagctcgtcggctggcccagccgtcagacataagtgcctccgagcc
atcctcaggatcatcttcttcgccgatgccgagctcctcaaggacgtgctgaggaaccac
gctgtgtccagtcacattgcctccatgctgtccagccaagacctgaagattgtagttggc
tctttgcagatggctgagatcctcatgcagaagctgcccgacgtattcagtgtcttcttc
agaagagaaggtgtgatgcaccaggtaaagaacctggctgagtcagaggccttcctcacc
agtcccccaaaggcgtgtaccagcggcacagctagcttgtgtaccaccaccatcagcact
gcgaccactacggcggcctccaacgccaccccagacctgggctcgcctagcttccagcac
agcatggacgactcactagacctcagtccacaggggcggttaagtgatgtgctgaagaga
aaacgtctgcctaagagagggcccagaaggcccaaatactctcctcccagggacgacgac
aaagtagacaatcaggccaagagtcctaccactactcagtcccccaaatcctccttcttg
gccagtctgaaccccaagacctggggcaagctgggtgctcagaccaacagcaccaactct
gagccctctcgcacggccggggtgagcggcctggcacgcgcccctcccaaggactcagtc
tccaacaacagggacaagatcaaggcttggattaaagaacaggcctgtaagtttgtggcc
cgctacttcaacactgaaaaaattgatggcagcaaccccgcactgaatgtactccagaga
ctctgcaccgccacggaacagctcagcctgcagatggacggtggcgtggagtgcctcgtg
gagatctgcagtatcgtgtcagagtcggatgtgtcgtctttcgagatccagcatagcggc
ctggtcaagcagctgctgctctacctgacctccagcagtgaccgtgacctggtcagccgt
gacgtccgcctcaagaggttcctgcacgtcttctacggctgcccgatcccggggatggag
ccggcaggccgactggagccgtctgagaatgggcccctgctgtcactggtgcacaagatg
aacaactgcctaagccagatggagcagttccctgtcaaggtgcacgacttccccagtggc
aacggcaacgggagcagagggtctcaggccctgaagttcttcaacacacaccaactcaag
tgtcagctgcagaggcacccggactgtaccaatgtgaagcagtggaaggggggcccggtg
aaaattgatcccctggccttggtacaggccattgaacgttacctggtcgtccgaggttac
ggacgaatcagagaggaggatgaggacagtgacgatgatggttcagatgatgaaattgac
gaatctctggcggcccagttcctgaactctggcagcgtgcgccaccggctacaattctac
atcggcgaccaccttctaccctacaacatgacggtgtaccaggcagtgcggcaattcagc
ctgcagtccgaggaggagagagagtccacggacgacgaggccaacccgctcgggcgggct
ggcatctggaccaaaacccacaccatatggtataagccagtgagggacgatgaggatggt
actaaggatgcggtgggagggaagaggggccgggcacagaccgcccccaccaagacctcg
ccccgcaacgctaagaaacaggacgagctgtggcacgacggcgtgtgtcccagcgtggcc
agccccttggagatgtaccttatgtcggagcccccggagagcatcaccttcgacgacccg
tctctggacgtcaacctgctgctcagggtgctgcactccattagtagttactggttctac
ctgtacgacaatgctgtgtctaaggagatcatccccaccagtgagttcatcaacagtaag
ctgactgccaaggccaatcgacagctgcaggaccctctggtcatcatgaccggcaacatc
cccacctggctcacagagctcggcaagacctgtcccttcttcttcccgttcgacacacgg
cagatgctcttctatgtaacagcgtttgaccgtgaccgggccatgcagcgcctcctcgac
accaaccccgagatcaaccaatcagattctcaggacagccgtgtggcgccccgcctcgac
aggaaaaagcgaacgataaaccgtgaggagctgctgaagcaggcggagtcagtgatgcag
gacctcggcagctccagagccatgctggagatccagtatgagaacgaggtgggcacaggg
ctgggtcccaccctggagttctacgccctggtctcccaggagctgcagagggccgacctc
gggctgtggcggggtgaggaggtcaccctgtccaaccccaaaggaagccaagaagggacc
aagtacatgttcagctcccgagggctgtttgccgttcccttcggcaggacaaccaaaccg
gcgcacatcgccaaaatcaagatgaagttccgcttcctgggcaagctgatggccaaggcc
ataatggacttcagactgctggacctgcccctggggctgcccttctacaagtggatgctg
cggcacgagacatccatcagctcccacgacctggtcaacatcgacccgggagtggccaag
tccatccagcacctggaggatatcatccgccagaagaagaggctggagcatgacctctcc
cagacgagggagaccctgcagcaggctctggagagtctcaacatgaacggctgctctgtg
gaggacctgggcctggacttcaccctgcctggtttccccaacattgagctgaagaagggg
ggcaaggacgtccctgtcaccatctacaacctggaggagtacctcaggctggtggtctac
tggacgatgaacgaaggcgtgtcccggcagtttgagtctttcagggaagggttcgagtcg
gtcttccccctgcatcacttgcagtatttctaccctgaagagttggatcagctgctttgt
ggcagcaagtccgagacctgggacgtcaagaccctgatggaatgctgtcgtcccgaccac
ggctacacacatgacagtcgtgctgttaggttcctgtttgatgtgctcagcagttttgac
gcagagcagcagagactcttcctgcagtttgtcacaggaagccccagactgcctgttgga
ggtttccgtagtctgaacccaccgctgaccattgtgcggaagacttttgagtcaacggag
aacccggacgacttcctgccctcggttatgacctgcgtcaactacctgaagctgcccgac
tactccagcatcgagatcatgcgcaagaaactgttgattgcagcccgagagggccagcag
tccttccacctgtcctga
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