Salmo trutta (river trout): 115206217
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Entry
115206217 CDS
T08542
Name
(RefSeq) inner ear-specific collagen-like
KO
K24214
otolin-1
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
stru04990
]
115206217
Domain-containing proteins not elsewhere classified [BR:
stru04990
]
C1q domain-containing proteins
Adiponectin / short collagen group proteins
115206217
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Collagen
C1q
Motif
Other DBs
NCBI-GeneID:
115206217
NCBI-ProteinID:
XP_029628783
Ensembl:
ENSSTUG00000019750
LinkDB
All DBs
Position
13:60230498..60235318
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AA seq
485 aa
AA seq
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MLPYHSALLAVMSLTVTSVSTKTTQRPKYQYTKKPMLYREQPQITMQPLTTIIPKTLKSV
EKSDPMDPYPLATTETTTYPSDAYQDYYTETTGPPGVGHDNYTMDYNECYFNFCECCPPE
RGPRGPKGDRGIPGSHGEEGERGPRGFSGLAGSNGTMGPKGDRGVKGDLGYRGMAGTPGN
PGKPGERGGFGFKGEKGDSGTPGVKGDQGEKGESQNGTKGERGEPGMEGPTGPPGLAGVQ
DQKGDKGDKGECGTFGERGLKGDRGNPGPPGIQGQVGLPGVDGMQGSPGVVGDQGDPGPP
GAQGEPGVRGLPGPQGGRGMFGPKGDRGLPGMRGDRGPRGIRGAKGNGVIQKRSAFSVGL
SPSKSFPPSGFPVRFDKVFYNGENHYNSSSNSFTCVHGGVYVFSYHITVRNKPLRAALVV
NGVRKVRTRDSLYGQDIDQASSLVLLQLVVGDQVWLETLRDWNGVYASSEDDSTFSGFLL
YADKP
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgctcccctatcactcggcactcttggcagtgatgtcactcacagtgaccagtgtatcg
acgaagaccactcagcggccgaagtaccaatacaccaagaagcccatgctttaccgcgag
cagccccagattaccatgcagcccctaaccaccatcatccctaagacactgaaatcagtg
gagaaatcagatcccatggacccctaccctctggctaccacagagactacaacctacccc
agcgatgcctaccaggattactatactgaaaccacagggccccctggtgttgggcatgat
aattacaccatggattataatgagtgctacttcaatttttgtgagtgctgtccaccagag
aggggccctcgagggccaaaaggagacagaggaataccaggttcacatggagaagagggg
gagcgaggacccagaggcttttctggactggctggttcaaatggaactatggggccaaaa
ggagacagaggagttaaaggtgacctaggataccgtggaatggcaggaactccgggtaac
ccagggaaaccaggggagagaggtggatttggcttcaaaggtgaaaaaggtgacagcggg
acccctggtgtcaaaggtgaccagggggagaagggtgaaagccaaaatgggactaagggt
gagagaggggaacctggaatggaaggcccaacaggtcctccagggctggctggagtgcaa
gaccagaagggggacaagggggacaaaggagagtgtgggacatttggtgagagaggactg
aagggcgatagagggaaccctgggcctccaggtattcaaggacaggtgggccttcctggg
gtggatggcatgcagggctcccctggtgtggtgggcgaccagggggatccaggaccccca
ggggctcaaggtgagccaggggtgcgagggctgcctggaccccagggagggagggggatg
tttgggccaaagggtgacagaggcctccccgggatgagaggggacaggggccctcggggg
atcagaggggcgaagggtaacggggtgattcagaaacgctcagctttcagtgtgggcctc
tctcccagcaagtccttccctccatcgggcttccccgtccgcttcgacaaggtcttctac
aacggagagaaccattacaactcctcctccaacagcttcacctgtgtccacgggggggtc
tacgtgttctcctaccacataaccgtacggaacaagcccctgcgtgccgccctggtagtc
aatggggtgaggaaggtgcggacacgggactctctgtatggccaggacatcgaccaggcg
tccagcctggtgctgctgcagctggtggtgggggaccaggtatggctggagacactgagg
gactggaacggtgtctacgccagtagtgaggacgacagcaccttctctggctttctgctc
tacgctgacaagccctga
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