Salmo trutta (river trout): 115206219
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Entry
115206219 CDS
T08542
Name
(RefSeq) rab5 GDP/GTP exchange factor-like
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
stru
Salmo trutta (river trout)
Pathway
stru04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
115206219
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
stru04131
]
115206219
Membrane trafficking [BR:
stru04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
115206219
Protein recycling
Other Rab GTPase associated proteins
115206219
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS9
DUF5601
zf-A20
Rep_N
Motif
Other DBs
NCBI-GeneID:
115206219
NCBI-ProteinID:
XP_029628786
Ensembl:
ENSSTUG00000019814
UniProt:
A0A673ZKB4
LinkDB
All DBs
Position
13:complement(60244768..60256945)
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AA seq
496 aa
AA seq
DB search
MSHRSERRGIHVDQSELLCTKGCGFYGNAAWQGLCSKCWREEYQQTRHKQIQEDHALAER
LQKEEEAAYANNHQGAAQPQPAIAPFSKFEERKTKEKSRKVNTMTKFFTPSAKTPPKKES
VPGEALTTPSPSVSRKPLETDRTTREFIDFLKTLKPGREIFKQCRAFTESMAYKRDLGAD
ELSECVQDFYQNLSDRLHTHFKGSSERVESVMDEVERYMMTRLYEEVFCPETTDDEKKDL
AIQKRIRALHWVTIEMLCVPVDEEIPEVSDNVVKAITDVIEMDSKRVPRDKLTCITRCSK
HIFNAINTTKKEAASADDFLPTLIYIVLKANPPRLQSNIQYITRFCNPSRLMSGEDGYYF
TNLCCAVAFIEKLDGQSLNLSVEEFDLYMSGQASPQRPQAVPSPACSAAFSQMNESLDLL
TGLGVRQERVMEGARRLESDLIDWRDGVEHKVQDVLERFPLEMHPPASPTASSAIDADNV
ENDHLPSPLQPQLFAG
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgagccaccggtcagaacgtcgtgggatccatgtggaccagtcagagcttctgtgtacg
aagggatgtggtttctatggcaacgcggcctggcagggcctctgctccaagtgctggcgg
gaggagtaccaacaaaccagacacaaacagatccaggaggaccatgcactggcagagagg
ttacagaaggaggaggaggcagcgtatgctaacaaccaccagggggcagcccagccccag
cctgccattgcacccttcagcaagtttgaagagaggaaaaccaaggagaagtcacgtaaa
gtcaacacaatgactaagtttttcactccctcagcaaagacaccgcccaagaaagaatcc
gttcctggcgaggccctgacgacccccagcccctcagtgagccgcaagcccttagagacg
gaccgcaccacacgagagttcatcgacttcctcaagacactgaaacctggcagggagatc
ttcaaacagtgccgagccttcacagagagcatggcctacaagagggacctgggtgctgat
gagctgtctgagtgcgttcaagacttctaccagaacctttcagaccgcctgcacacacac
ttcaaagggtcgtcggagcgcgtagagagtgtgatggacgaggtagagaggtacatgatg
acacgtctctacgaggaggtcttctgtcctgagaccacagacgatgagaagaaagacctg
gccattcaaaagagaatcagggccttgcattgggtcaccattgagatgctgtgtgtccct
gtggatgaggagattccagaggtgtctgataacgtggtcaaagccatcacagacgtgatc
gagatggactcgaagcgtgtgcccagggacaagctgacctgcatcacacgctgcagtaag
cacatcttcaatgccatcaataccaccaagaaggaggcggcatctgctgatgacttcctg
cccaccctcatctacatcgtcctgaaggccaaccctccgcgactgcagtccaacatccag
tacatcacccgcttctgtaaccctagccgcctcatgagcggagaagacggatactacttt
accaacctgtgctgtgcggtggccttcatagagaagctggatggccagtctctgaacctg
agcgttgaggagtttgatctctacatgtcaggccaggcgtctccccagcggccccaggct
gtcccctccccggcctgtagtgctgctttcagccagatgaacgagagtctggacctactg
acggggctgggcgtgaggcaggaacgtgtcatggagggggctcgccgcctggagagtgac
ctcatcgactggagggatggggtagagcacaaagtgcaggatgtgttggagaggttcccc
ctggaaatgcaccccccagcgtcccccaccgcctcttctgccatagatgctgacaacgtg
gaaaacgaccacctgccttctcctctccagccccagttgtttgccggctga
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