Salmo trutta (river trout): 115206229
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Entry
115206229 CDS
T08542
Name
(RefSeq) neurobeachin-like isoform X1
KO
K24183
neurobeachin
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
stru04131
]
115206229
Membrane trafficking [BR:
stru04131
]
Protein recycling
Rab GTPases and associated proteins
Rab4 associated proteins
115206229
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4704
Beach
DUF1088
NBCH_WD40
PH_BEACH
Beta-prop_IFT122_1st
Laminin_G_3
WD40
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_THOC3
Neurobeachin
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_WDR3_2nd
Beta-prop_EML_2
WDR55
WD40_WDHD1_1st
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Motif
Other DBs
NCBI-GeneID:
115206229
NCBI-ProteinID:
XP_029628804
LinkDB
All DBs
Position
13:complement(60859444..61167970)
Genome browser
AA seq
2955 aa
AA seq
DB search
MTSERPAVKMPGALSLSDRQIPAGHGQPGGSGTGEIMVSGSGSMVLPAGMINPQVPIRNI
KMKFAVLIGLIQVGEVSNRDIVETVLNLLVGGEFDLEQNFIIAAAESLGCMVELLEHCDV
TCQAEVWSMFTAILRKSVRNLQTSTEVGLIEQVLLKMSSVDDMIADLLVDMLGVLASYSI
TVKELKLLFSMLRGDRGLWPRHAVKLLSVLNQMPQRHGPDTFFNFPGRSAAAIALPPIAK
WPYQNGFTLNTWFRMDPLNNINVDKDKPYLYCFRTSKGIGYSAHFVGNCLIVTSLKSKGK
GFQHCVKYDFQPRKWYMISIVHIYNRWRNSEIRCYVNGQLVSYGDMAWHVNTNDSYDKCF
LGSSETADANRVFCGQLGAIYVFSEALNPAQIFAIHQLGAGYKSTFKFKSESDIHLAEHH
KQVLYDGKLASSISFTYNAKATDAQLCLESSPKENASIFVHSPHALMLQDVKAIVTHSIH
SAIHSIGGIQVLFPLFSQLDYHQPNDQHNYQHHETQLETTVCATLLVFLVDLLKSSVAMQ
EQMLGGKGFLVIGFLLEKCSRVHITRAVLEQFLSFAKYLDGLTHGAPLLKQLCDHILFNA
AIWIHTPAKVQLSLYTYLSAEFIGTATIYTTIRRIGTVLQLMHSLKYYYWTCNPEASSGI
TPKGLDGPRPTQQEIISLRAFMLLFLKQLILKDRGVKEDELQSILNYLLTMHEDDNIHDV
LQLVVALMSEHPASMIPAFDQRNGIRVMYKLLASKTESIRVQSLKVLGYFLKHLGHKRKV
EIMHTHSLFTLLGERLMLHTSTVSVTIYNTLYEILTEQVCTQVVHKPHPEPDSTIKIQNP
MILKVVATLLKSSSPSVELMEVRRLFLSDMIKLFSNSRENRRCLLQCSVWQDWMFSLGYI
NPKNPEEQKMMEMVYSLFRILLYHAIKYEWGGWRVWVDTLSIAHSKVTYEAHKEYLAKMY
EDYQRQEEENIKKGRKGLVSTISGLQDLQAGGIQGNMEIREVDDHSQTQTPESEADYPET
PGHPRNILSEAKTGEERGLEGTERTGSGVRVEVHDLLVDIKAEKVEATEVKLEDLDLSPE
PLGVTVGVAGGVVSEDRGGALVQVDSLLDNVYCAAVEKLSSSAASGVMVPNATVGVAPDN
HNTGPLITLADDDKDSLPSNSSFLFGQEEPLVLPSPGSNPHPDPEPPVPPARSHDLGLLA
HMTGSSELGIIGMVSPGGPINSILEEERLKLQTSLGDVTSMSREEACSKGSVFTDAGAGA
SARGSGVSEGSEPSAGVRGSGADAVSNTSDTERSYDRKDKEVKKIQTTATTQSLHGRTAA
QLERALRVDLGFRGMPMTEEQRRQFSPGPRTTMFRIPEFKWSPMHQRLLTDLLLALETDV
HVWRSHSTKSVMDFVNSNENIIFVHNTIHLLSQMVDNIIIACGGILPLLSAATSPSAELE
NIEAVQGMSSETAVSFLSRLMAMVDVLVFASSLNFSEIEAEKNMSSGGLMRQCLRLVCCV
AVRNCLDVRQRQRDRGTNSKSQDNLYGTASANKDPDRLLQDVDINRLRAVVFRDVDDSKQ
AQFLALAVVYFISVLMVSKYRDILEPQREPNRMISQSACSIRHEINSPTSTETPLAYPDH
SKAPPTPVEELHIERGSLPHTDSGIGEEQVTSVLNGADLDPSGPGRVDVMSSLLGILSSG
EKHSQEFLLEPPGLEVLTTASSISSISQSNINVREILKSLVAGPVEGVEPGPEPLPYPDP
AVQREIHHPMLPMQFHSFDRSVVVPVKKPPPGSLAVNMVGHTSSSSLATGSTPNIFSAAS
NTAKSMINTTGATDSASSSSTSSSSFVNGATSKNLPAVQPVAPMPEDTVENMSALLCEVD
QDLRVFSWSLQRGHTETETEMAPRGAGQCHSITTKLERALEKVAPLLREIFVDFAPFLSR
TLLGSHGQELLIEGLVCMKSSTSVVELVMLLCSQEWQNSIQKNAGLAFIELINEGRLLCH
AMKDHIVRVANEAEFILNRQRAEDVHKHAEFESNCAQYAADRREEEKMCDHLISAAKHRD
HVTANQLKQKILNILTNKHGAWGSLAQSQLNDFWRLDYWEDDLRRRRRFVRNPFGSTHLD
IPCKTLDDYGSEEDELVKSKKGFRSQAVANQSPETDLMLDGDDDTASLLQEKEIDNLAGP
VVLSTPAQLVAPVIVARGTLSITTTEIYFEVDEDDPSFKRLDSTVLAYSEGLHGKWMFSE
IRAVFSRRYLLQNTGLEVFMANRTSVMFNFPDQATVKKVVYSLPRVGVGTSYGLPQARRI
SMATPRQLFKSSNMTQRWQRREISNFEYLMFLNTVAGRTYNDLNQYPVFPWVLTNYESEE
LDLTLPGNFRDLSKPIGALNPKRAVFYAERYETWEEDQTPPYHYNTHYSTANSTLLWLLR
IEPFTTFFLNANNNKFDHPDRTFSAITRSWRHCQRDTSDVKELIPEFYYLPEMFGNSNGY
HLGQREDGSMVCDVELPPWANKPEDFVRINRMALESEFVSCQLHQWVDLIFGYKQRGPEA
VRALNVFHHLTYEGSVSLDSITDPALREAMEQQILIVGQTPSQLLIEPHPPRSSAMHLCF
LPQSPLMFKDQMQQDVIMVLKFPSNSPVTHVAANTLPHLSVPAAVTVTCSRLFAVNRWHN
TVGLRGAPGYSLEQAHHLPIEMDPLIANNTGSNKRQITDLVDQSIQINTHCFVVTADNRY
ILVCGFWDKSFRVYSTETGKLTQIVFGHWDVVTCLARSESYIGGDCYIVSGSRDATLLLW
YWSGRHHIIGDNPNNSDYPAPRAVLTGHDHEVVCVSVCAELGLVISGAKEGPCLVHTITG
DLLRALEGPDNCLCPRLISVSSEGHCIICYERGRFCNFSINGKLLAQMEVNDSTRAIMLS
SDGQNLVTGGDNGVVEVWQACDFKQLYIYPGCDAGVRAMDLSHDQRTLITGMASGSIVAF
NIDFNRWHYEHQNRY
NT seq
8868 nt
NT seq
+upstream
nt +downstream
nt
atgacaagcgagaggccggcggtgaagatgccgggtgctttgtcgctttctgaccgacaa
atcccagcgggtcatgggcagccagggggctctggtaccggggaaataatggtatctggc
tcgggctctatggttctaccggccgggatgatcaacccgcaggttcccatccggaatatc
aagatgaaattcgcggttctgatcggattgatccaggtgggggaggttagcaacagagat
atcgtggagactgtgctcaacctgctggtggggggtgagtttgacctggagcagaacttc
atcatagcggcggcagagagcctgggctgtatggtagagctgttggagcactgtgatgtg
acctgccaggctgaggtgtggtccatgttcacagccattctcaggaagagtgtccgtaac
ctccagaccagcactgaggtgggcctcatagagcaggtgctgctgaagatgagctccgtt
gacgacatgatcgcagacctgctggtggatatgttaggagtgctggccagctacagcatc
acagtgaaggagctcaaactgctgttcagtatgctgaggggagaccgaggactctggccg
aggcatgcagtgaagctgctgtctgttctgaaccagatgcctcagagacacggtccagac
actttcttcaacttccccggacgcagtgctgcggccatagcgctgcctcccattgctaag
tggccttaccagaacggcttcactctcaacacctggttcagaatggaccctctaaacaac
atcaatgtagacaaagacaaaccatatctctactgctttcgcaccagtaaaggaatcggc
tactctgcacatttcgtgggcaactgtctgatcgtgacatcgctgaagtctaaaggcaaa
ggcttccagcactgtgtcaaatatgactttcaacctaggaagtggtacatgatcagcatc
gtccatatctacaaccgctggaggaacagtgagatccgttgctatgtcaacggtcagctg
gtctcctatggcgacatggcctggcacgtcaacaccaacgatagttatgataagtgcttc
ctgggttcgtcggagacagctgacgctaacagggtgttctgtggtcagctgggggccatc
tatgtgttctctgaggctctcaacccagctcagatatttgccattcatcagctgggagcg
ggctataagagtacgtttaagtttaagtcggagagtgacatccacctggcggagcaccat
aaacaggtcctgtatgatgggaagctggccagctccatctccttcacctacaacgccaag
gctactgacgcccagctctgcctggagtcatcgcccaaggagaacgcctccatcttcgtc
cactcaccccacgcccttatgctacaggatgtgaaggccatagtgacccactccatccac
agtgccatccactctataggaggaatccaggtgctgttccctctcttttcccagctggac
taccatcaacccaacgaccagcacaactaccagcaccatgagacccagctggagactact
gtctgtgccaccctcctggtgttcctggttgacctgttgaagagctcggtggcgatgcag
gaacagatgctgggagggaaaggattccttgtaatcgggtttctgttggagaagtgctcc
agggtccacatcacacgtgcagtcctggagcagttcctgtccttcgctaaatacctggac
gggttaacccatggagcgccactcctcaaacagctctgtgaccacatcctgttcaacgca
gccatctggatacacacccccgccaaggtccagctctctctgtacacgtacctgtctgca
gagtttatcggcacggcaaccatctacaccaccatccgtcgtattgggacagtgctgcag
ctgatgcacagtctgaagtactactactggacctgcaaccctgaggccagcagtggcatt
acacctaaaggactggatggtccaaggcccacccagcaggagatcatctctctcagggct
ttcatgttgctgttcctcaaacaactcatcctcaaggaccgtggcgtgaaggaggatgag
ctgcagagtatcctgaactacctgctaaccatgcatgaggatgataatatccatgatgtt
cttcagctggtagtggctctgatgtcagaacacccagcatccatgattccagccttcgac
cagaggaacggcattcgggtgatgtacaagctgttggcctcaaagactgagagcatcaga
gtccagtccctcaaagtcctgggatatttcctcaaacacctcggacataaaaggaaggtt
gagatcatgcacacacacagtctcttcactctgctgggggagaggctgatgctacacact
agtactgtatcagtgaccatctacaacacgctgtacgagatcctgactgagcaggtgtgt
acccaggtcgtccacaaaccccaccctgaaccagactctacaatcaagatacagaacccc
atgattcttaaggtagtagcgactctgttgaagagctcgtcccccagcgttgagctgatg
gaggttcgacgtctcttcctctcagacatgatcaaactgttcagcaacagccgcgaaaac
cgacggtgtctgctgcagtgttcagtatggcaggactggatgttcagtctgggctatatc
aaccctaaaaacccagaggaacagaaaatgatggagatggtctatagcctcttcaggatc
ctgctctaccatgccatcaagtatgagtggggaggttggagggtctgggtggatacgctc
tccatcgctcactccaaggtaacatacgaggcccataaggagtacctggctaagatgtat
gaggactaccagcgtcaggaggaggagaacattaagaaggggaggaagggtctggtcagc
accatctcaggcctgcaggacctccaggccgggggcatccaggggaacatggagatcaga
gaggtagacgaccactctcagacacagaccccggagagcgaggctgactaccccgagacc
cccggccacccccggaacatactgtcggaggcgaagacgggggaggaacgtgggctcgag
gggacagagaggacggggtcaggggtcagagtggaggttcatgacctgttggtggacatc
aaggctgagaaggtggaagccacggaggtgaagctggaggacctggacctgtctccagag
ccgctgggcgtgacagtgggtgtggctgggggtgttgtctctgaggacaggggcggggcg
ttggtccaggtggactccctattggacaacgtgtactgtgctgctgtagagaagctgagc
agcagcgccgccagcggagtaatggtccccaacgcaaccgtcggtgtagcccccgacaac
cacaacaccggtcccctcatcaccctcgctgacgacgacaaggacagtctccctagcaac
agtagcttcctgtttggccaggaggagcccctggtcctgccaagtcctggttctaacccc
cacccagaccccgagcccccagtccccccggctcgcagccatgacctgggcctgctggcc
cacatgacgggcagctctgagctggggatcatcggcatggtcagtcctggtggtccaatc
aacagcatcctggaggaggagaggttgaagctccagacctccctgggtgacgtcacctca
atgtccagggaagaggcctgctctaaggggtcagtgttcacagacgcgggggctggagct
agtgctagagggtctggggtgtcggaggggagcgagccctcggctggtgtgagaggtagt
ggggcggatgcagtcagcaacacctcagacacagagaggtcatacgacagaaaggacaaa
gaggttaagaagatacagaccactgctactacacagtccctccatggtcgtacggcggcc
cagttagagcgtgccctgcgtgtggacctgggcttcagagggatgcccatgacagaggag
cagcggcgccagttcagccctggccctcgcaccaccatgttccgcatcccagagttcaaa
tggtcgcccatgcaccagcgcctcctcaccgacctgctgttggccctggagacagacgtc
cacgtctggaggagccattcaaccaaatctgtcatggactttgtcaacagcaatgagaac
ataatctttgtccacaacaccatccacctcctctctcagatggtagacaacatcatcatc
gcctgtggagggatccttcctctgctctccgctgccacctctccttcagctgagttggag
aacatcgaggcggtccagggaatgtcttcagagacggctgtttccttcctgtcccgtctc
atggccatggtggacgttctggtgtttgccagctcactcaacttctctgagatagaggct
gagaagaacatgtcctctggaggcctgatgagacagtgtctacgactggtgtgttgtgta
gcagtgaggaactgtctggatgttagacagagacagagggacagagggaccaacagtaag
agccaggacaacctgtatggtacagcatctgccaacaaggaccctgacagacttctacag
gacgtcgacatcaaccgtctgagagctgtcgtgttccgggatgtggatgacagtaagcag
gcccagttcttggccctagcggtggtctactttatctctgtcctcatggtatcaaagtac
agggacatcctggaaccccagagagagcccaacaggatgatcagccaatcagcatgcagc
attcgccacgagatcaactcacctaccagcacagagacccccctggcataccctgaccac
agtaaggcgccccccacccctgtagaggaactccacatagagagaggatctctgccgcac
actgactctggcattggagaggaacaggtgaccagtgtgttaaatggggcagacctggac
ccttcaggacccgggcgagttgacgtcatgtcctccctgctcggcatcctttcctctggg
gagaagcatagccaagagttcctcttggagccgcctggcctggaggttctaacgaccgcc
tcctccatctcctcgatcagccaatcaaacatcaacgtcagagagattctgaagagccta
gtggctgggcctgtagagggggtagagcctggaccagagcccctcccctaccctgatcct
gccgtacagagagagatccatcaccccatgctgcccatgcagttccactcctttgacagg
agtgtggtggtcccagtgaagaagcctccaccaggcagtctggctgtgaacatggttgga
cacacatcttccagtagcctggcaacaggctccacccccaacatcttttctgcagcctcc
aacaccgccaagagcatgatcaacaccaccggagctacagactcagcctcctcttcctcc
acctcttcctcatccttcgtcaacggggccaccagtaagaacctgcctgctgtccagccg
gtggcgcccatgcctgaagacacagtggagaacatgagtgcgttgctctgtgaggtggac
caggatctgagagtctttagttggtccctgcagcgtggccacacagagacagagacagag
atggcccccagaggtgcaggccagtgtcatagtatcactactaagttggagcgtgcgctg
gagaaggtggcccccctcctcagggagatctttgtggactttgcaccgttcctctctagg
accctgttgggaagccatggccaagagctgctcatagaaggtctggtgtgtatgaagtcc
agcacctctgtcgtggaactggtcatgctgctctgctctcaggagtggcagaactcgatc
cagaaaaatgccggccttgccttcattgagctcatcaatgagggaagattgctgtgtcat
gctatgaaggaccacatcgtgcgtgttgccaatgaggcagagttcatcctcaacagacag
agagcagaagacgtccacaaacacgctgagtttgagtccaactgtgcccagtacgctgct
gatcggagggaggaggagaagatgtgtgatcacctgatcagcgctgccaaacacagagac
catgtgactgccaaccagctcaaacagaagatcctcaacatcctcaccaataagcatgga
gcctggggcagcctggcacagagtcagctgaatgacttctggcgtctggactactgggag
gacgacctacggaggaggcggagattcgtacggaacccctttggctccacccacctggac
atcccctgcaagacgttagacgactatggcagcgaggaggacgagttggtcaaatcgaag
aaggggttccgcagccaggcagtagccaatcagagcccagagacggacctgatgttggat
ggagacgacgacactgccagtctgctgcaggagaaggagattgacaacctggctggccca
gttgtcctcagcaccccagcccagctcgtggccccagtaatagtggcgcgagggacgctc
tccatcacgacgaccgagatctatttcgaagtggatgaggatgacccctccttcaaacgg
cttgactccacggtcctggcgtactcagagggtctgcatggtaaatggatgttcagtgag
atcagagcggtcttctccaggcgatacctgctccagaacactggcctggaggtcttcatg
gccaacaggacgtcagtgatgtttaacttcccagaccaggccacagtgaagaaggtggtc
tacagtctacccagggtcggagtgggaaccagctatggcctaccacaagccaggcgtatc
tccatggccacgccccggcagctcttcaagtcgtctaacatgacccagcgctggcagagg
agggagatctccaacttcgagtacctcatgttcctcaacaccgtcgcagggaggacctac
aatgatctgaaccagtaccctgtgtttccctgggttctcaccaactatgagtccgaggag
ctggacctcaccctgccgggcaacttcagagatctctccaagccaatcggagcgttgaac
ccgaagcgtgcagtattctacgcagagcgctatgagacctgggaagaggaccagacaccc
ccatatcactacaacacccactactccaccgctaactccaccctgctctggctgctcagg
atagaacctttcaccacgttcttcctgaatgctaacaacaacaagtttgaccatccagac
cggaccttctcagccatcacccgctcctggaggcactgccagagagacacctcagacgtc
aaggagttgattccagaattctactacctgccagagatgtttggtaacagtaatggttac
cacctgggccagagggaggacggcagcatggtgtgtgatgtagagctgcctccctgggcc
aacaagcctgaggactttgtcaggatcaaccggatggccctggaaagtgagttcgtgtcg
tgtcagctgcatcagtgggttgaccttattttcggctacaagcagcgcgggcccgaggcg
gtgcgcgccctcaatgtctttcaccacctgacctacgagggttccgtcagcctggacagc
atcactgaccccgccctcagagaggcgatggagcagcagattctgattgttggacagact
ccgtctcagttgctcatcgagccacatcctcctcgcagctcggccatgcacctgtgtttc
cttccccagagtcctctgatgtttaaggaccagatgcagcaggatgtgatcatggtgttg
aagtttccctccaactcccccgtgacacacgtagcagccaacaccctgccacacctctct
gtccctgccgctgtcactgtcacctgtagccgactgttcgctgtcaaccgctggcacaac
accgtcggtttgagaggagcgccaggttactccctggaacaggcccaccacctgcccata
gagatggaccctctgattgccaacaacactgggagtaacaagcgtcagatcacagacctg
gtggaccagagcattcagatcaacacacactgcttcgtggttaccgccgacaaccgctac
atcctggtctgtggcttctgggacaagagcttcagagtctactctactgagacaggtaag
ctgacccagatagtgtttggccactgggacgtggtgacgtgtctggccaggtcagagagc
tacatcgggggagactgctacatcgtgtcagggtccagagacgctacactgctactctgg
tactggagtggacgacaccacatcataggagacaaccccaacaacagtgactacccggca
ccgcgagctgtgctgaccggccatgaccatgaggtggtgtgtgtgtctgtgtgtgccgag
ctgggactggtcatcagtggagccaaagagggtccgtgtctggtccacactataacaggg
gacctgctgcgggccctggaaggcccagataactgcttgtgtccccgcctcatatctgtg
tccagcgagggccactgtatcatctgctacgagagaggacgtttctgtaacttcagcatc
aacggaaaattactggctcagatggaggtcaacgactcaacacgggccattatgctgagt
agtgacggtcagaacctggtgacaggaggagacaacggggtggtggaggtgtggcaggcc
tgtgacttcaaacagctctacatctacccaggctgtgatgctggtgtccgcgccatggac
ctctctcacgaccagaggactctcatcactggcatggcatccggcagcattgtggcgttc
aacatcgacttcaaccggtggcactacgagcaccagaacagatactga
DBGET
integrated database retrieval system