Salmo trutta (river trout): 115206264
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Entry
115206264 CDS
T08542
Name
(RefSeq) scavenger receptor class F member 1-like
KO
K24318
scavenger receptor class F member 1
Organism
stru
Salmo trutta (river trout)
Pathway
stru04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
115206264
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
stru04131
]
115206264
Membrane trafficking [BR:
stru04131
]
Endocytosis
Phagocytosis
Scavenger receptors
115206264
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
EGF_TEN
EGF_Teneurin
EGF_2
EGF_PEAR1L
Motif
Other DBs
NCBI-GeneID:
115206264
NCBI-ProteinID:
XP_029628887
Ensembl:
ENSSTUG00000047185
LinkDB
All DBs
Position
13:62992367..63000549
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AA seq
959 aa
AA seq
DB search
MGLFLTGLGLLLCCSLSAPQRLAPSGTNVCQDLRDPSTLVCCTGWRQRGEECTIPVCDGE
RACQQDEVCVYPGVCRCRPGYYGANCKTRCPPEFWAPDCRELCKCHPHGRCNPVTGECTC
LPNRWGPLCQNACRCGRHGHCHPVHGNCTCDEGWWTPTCTKQCQCYPGTSTCDPLTGRCQ
CAPGYWGQKCSLRCSCYISSCQQKTGACECQNGWWGQTCERHCNCDLKHSECNAVSGECV
CQPGYKGAVCNEPCGPGEYGSWCKLSCGHCKRGQSCSVVDGVCTACEPGWNGTRCDRPCS
RGYHGNHCQEACPRCRNGEPCDPRTGACSQCDPGWTGSRCDKPCSNRTFGDTCRFLCSPC
FHGHCDHVTGSCVCGPGFQGQSCNITCPDQLYGFNCSSVCDCEEGTACHPATGACPYSGH
RALIAGLLVPLILVLLGLVCCCCCCGGPTDGKDRVAVGDGGTSVRMKHHVFNVLANVSSA
VPCISVWSSGLPRVTVSHHDPELTFNHSFIEPPSSGWVTDGSSFDSDEETGEALYCVPPR
EDIPAVAGGEFQEFQHEMSSKCNMFPDPSAFSVSAEDMSLPFGIPRTSSNAKSKRPSVSF
AEGTRFSPKERRGSAQDLTPGAPRTKPKSPWGVLMLSALQAHGGKASEGEETGEGGVDGC
GGGTGPLEELGSSGEAGDPDVDRYPATPSQAMSTLQVPGAVVGRRRTISNAAVNRKGGQA
PGSTSDDQKAEIDKGMDKVTTVYVTVGKAGVGRPLSKLELPSSDGPVQAMLRRLSSLQRH
KDQEGGTRSKGKIPGAEGITKPPRRKLGARASVWEQGRPPPLGVEGPVGEGVPMRKPSRR
KQHVHHSSPAVMGSTDDGTNTHPPPEGANATITPTRPMSSILKSVPEVAGLEVRGERSAV
RGEIGDPGMQTETDSGYLTVGPAGVVTDAVSLSEVANDGVVASVDNGANLYENVMIMHS
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
atgggcctgtttctgacgggtctaggattactgctctgctgttccctctccgcccctcag
agactggctccctcggggacaaatgtctgccaggacctcagggatccctccactcttgtc
tgttgtactggatggagacaacggggagaggagtgtactatacctgtgtgtgatggcgag
cgggcctgccagcaggatgaggtgtgtgtatacccaggcgtctgtcgctgtcgacctggc
tactatggagccaactgcaagacacgctgccctccagagttctgggcaccggactgccgt
gagctgtgcaagtgccaccctcacgggcgctgtaacccagtcacgggcgagtgcacatgc
ctccccaaccgctgggggccactctgccagaacgcctgcagatgtggccgccacgggcac
tgtcaccctgtgcacggcaactgcacctgcgatgagggctggtggacgcccacctgtacc
aagcagtgccagtgctacccaggcacctccacctgcgacccactgaccggcaggtgtcag
tgtgccccagggtactggggtcagaagtgcagccttcgctgtagctgctacatatcgtcg
tgccaacagaagacgggggcgtgcgagtgccagaatgggtggtggggtcagacgtgtgag
cgccactgtaactgtgacctgaagcacagcgagtgtaatgccgtcagcggggagtgtgta
tgtcagcctgggtacaagggagccgtctgtaatgaaccgtgtggacccggggagtatggc
agctggtgtaaactgagctgtggccactgtaaacgaggccagtcgtgctctgtggttgac
ggtgtctgtacggcctgtgagcctgggtggaacggcacacgctgtgaccggccgtgcagt
cggggttaccatggaaaccactgccaggaggcgtgcccacgctgcaggaacggtgaacca
tgtgaccccaggacgggggcgtgttcacaatgtgatccaggatggaccggatccaggtgt
gacaagccatgctctaacagaacattcggggatacctgccgcttcctgtgcagcccctgt
ttccatggccactgtgatcacgtgacaggaagttgtgtctgtgggcccgggttccaggga
cagagttgtaacatcacctgtccagaccagctgtatggctttaactgttcctctgtctgt
gactgtgaagagggcaccgcctgtcacccagcaacaggggcgtgtccatacagtggtcac
agggctctgatcgctggtctcctggtccctctgatcttggtgctgttgggtctggtctgc
tgctgctgctgctgtggaggacctactgacggcaaagacagggtagcagtgggtgacggt
ggtacctctgtccgtatgaagcatcatgtgtttaacgtcctggccaacgtgagctctgct
gtaccctgtatctctgtctggtcctctgggctacccagagtcacagtgtcccaccacgac
cctgagctgacgttcaaccacagtttcatagagcctccctcctcaggctgggtgacggat
ggatcctccttcgacagtgatgaggagaccggagaggctctctactgtgtcccccccaga
gaagacatccccgcagtggcgggcggtgagttccaggagttccagcatgagatgagttct
aagtgtaacatgttccccgacccctctgccttcagcgttagtgcagaagacatgtccctc
ccctttggcatcccccgcacctccagcaacgccaagtccaaacgcccctccgtctccttc
gccgaaggcaccaggttcagccccaaggagcgccgaggctctgcccaggacctgactccc
ggggccccccgcaccaaacctaagtccccctggggggtcctgatgctgtcagccctccaa
gcccatggagggaaggcctcagagggggaagagacaggtgaggggggtgtggatggatgt
ggaggtgggactggaccattggaagaactaggatccagtggtgaagcaggggaccccgat
gtggacaggtaccctgccaccccgtcccaagccatgtctactctgcaggtgcctggagca
gtagtaggaagaagacgcaccatatccaatgccgctgttaacagaaagggtgggcaagca
ccagggtccacatccgatgaccagaaggcagagatagataaagggatggacaaggtgacc
acagtgtatgtgacagtggggaaggcgggggtggggaggcccctgtctaaactagagctc
cccagctcggatggcccggtacaggccatgctacgcaggctaagcagcctccagagacat
aaagaccaggaggggggaactaggtccaagggtaagatcccgggggcggaggggatcacc
aagccacccaggaggaagctgggggccagggccagtgtgtgggagcaggggcgtccccca
cccttgggggtggagggtcctgtaggggaaggcgtacctatgaggaaacccagtaggagg
aaacagcacgttcaccacagctcgcctgctgtcatgggaagcactgatgatggcactaac
actcaccccccacctgagggcgccaatgccactattacgcctacgaggcccatgtcctcc
attttgaaaagcgtgccagaggtcgctgggttagaagtcaggggtgaaaggtcagcggtg
agaggagagatcggtgaccctgggatgcagactgagactgacagtggatatctaacagtc
gggccagctggagttgtaaccgacgctgttagtctgagtgaagtcgccaatgacggagtg
gtggccagtgtggacaatggagctaacctatatgagaacgtgatgattatgcattcctaa
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