Salmo trutta (river trout): 115206282
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Entry
115206282 CDS
T08542
Name
(RefSeq) clustered mitochondria protein homolog isoform X1
KO
K03255
protein TIF31
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
stru03012
]
115206282
Translation factors [BR:
stru03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
115206282
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLU
eIF3_p135
TPR_12
CLU_N
TPR_10
TPR_MalT
TPR_NPHP3
GSKIP_dom
ANAPC3
Rad60-SLD
PGA28-like_dom
Motif
Other DBs
NCBI-GeneID:
115206282
NCBI-ProteinID:
XP_029628913
LinkDB
All DBs
Position
13:63532340..63558706
Genome browser
AA seq
1440 aa
AA seq
DB search
MVSKTDDIPASVPNCNVNTVDLVGETPDRKETSKGPHKDPCGHSVDTAVMNGGGAHDLSE
EESKQDGAGDTDGGEDSNEQEVIVIQDTGFTVKIQAPGTEPFDLQVSPQEMVQEIHQVLM
DREDTCHRTCFSLQLDGNVLDNFAELKSIEGLQEGSLLKVVEEPYTVREARIHVRHIRDL
LKGLDPSDAYNGVDCNSLSFLSVFTDGDLGDSGKRKKKGSELEQIDCTPPEHILPGSKER
PLLPLQPQNKDWKVIMTPMQCLKVLTMSGWNPPPGNRKMHGDLMYLYMVTVEERHISITA
STRGFYLNQSTTYTFNPKPANPSFLSHSLVELLSQISPAFKKNFTALQKKRVQRHPFERI
ATPFQVYSWTAPQVDHTMDCVRAEDAYTSRLGYEEHIPGQTRDWNEELQTTRELARKNLP
ERLLRERAIFKVHSDFAAAATRGSMAVIDGNVMAINPGEETRMQMFIWNNIFFSLGFDVR
DHYRELGGDAAAHAAPTNDLNGVRAYGAVDVEGLYTLGTVVVDYRGYRVTAQSIIPGILE
REQEQSVIYGSIDFGKTVVSHGKYLELLERTSRPLKVQRHNVLNEKDESMELCSSVECKG
IIGNDGRHYILDLLRTFPPDLNFLPVEGEELSPESVRQGFPRQHRHRLACLRQELIEAFV
EHRYLLFMKMAALQLMQQKANKESKLATLTENSSPGAAVPALPSTETPDGSAESSETSTE
TLTDANSDAAQTESTSDAPQAAATETTTTEAAPKTEPMTETDSSATTTTNASQATPIEVN
VVPTVTTNGPLVPFATAIQNGECESPLEGKAEDIIPGLAQAKELAESLDTEDGSGIDPKS
REVVLNACKAVGSISNTSFDIRFNPDIFSPGVRFPEDSADDIQKQKQLLKDAGAFLVSCQ
IPSLVKDCLDHSALPMDGATLTEALHQRGINVRYLGNVLAFVDKTPAKAQLEHFYRIGIS
ELITRCAKHIFKTYLQGVELSALSAAVSHFLNCFLSSFDAVAHLPADELVSRRKNRKRRN
RVPGGGDNTAWASLTPSELWKNIVSEAQSYYHFTLHCENADQVVEKYGLQKITLLREISI
KAGIQILIKEYNFDSRHKPAFTEEDILNIFPVVKHVNPKASDAFHFFQSGQAKVQQGYLK
EGCELINEALNLFNNVYGAMHVEICACLRLLARLNYIMGDHHEALSNQQKAVLMSERVLG
VEHPNTIQEYMHLALYCFANGQLSTALKLLYRARYLMLMVCGEDHPEMALLDSNIGLVLH
GVMEYDLSLRFLENALAINSKYHGPRSLKVALSHHLVARVYESKAEFRSALQQEKEGYTI
YKNQVGEAHEKTKESSEYLKYLTQQAVALQRTMNEIYKNGSNASIMPLKFTAPSMASVLE
QLNIINGIIFIPLSQKDLENLKAEVQRRQQLQESGKSVEDLTVHSPLELEDKIPMDVNVD
NT seq
4323 nt
NT seq
+upstream
nt +downstream
nt
atggtgagcaagacagatgacatcccggcgtcagtacccaactgtaatgttaacacagtt
gatcttgtaggagagacgccagaccgcaaagagacctccaagggaccacacaaggaccct
tgtgggcacagtgtagacacggcggtgatgaatgggggtggggcccacgatctttcggag
gaggagtccaagcaggatggggctggtgacacagatggtggggaggattctaacgaacag
gaagtgattgtgattcaggatacaggtttcactgtgaagatccaggcacccgggacggag
ccttttgacctccaggtttcaccccaggagatggtgcaggagatccaccaggtgttgatg
gaccgtgaggacacctgccatcgtacctgtttctccctgcagctggacggcaacgtgctg
gataactttgctgagctgaaatccatcgagggcctgcaggagggctccctgctcaaagta
gtggaagagccctacacagtgcgcgaggcccgtatccacgtgcgtcacatcagagacctg
ctgaaaggtctggacccgtctgatgcctacaacggcgtggactgcaactccctctccttc
ctcagcgtcttcaccgacggggacctgggagacagtggtaagcggaagaagaagggcagt
gagctggagcagatagactgtacccctccagaacacatcctgcctggcagtaaagagcgc
cccctgctgcctctccagccacagaacaaggactggaaggtaataatgacgcccatgcag
tgcctgaaggtcctgactatgagtggctggaacccccctcctggcaacaggaagatgcac
ggtgatctcatgtacctgtatatggtgactgttgaggagagacacatcagtatcaccgcc
tctacacgtggtttctacctcaaccagtcgaccacctacaccttcaaccccaagccagcc
aaccccagcttcctcagccactcgttggttgagctgctgagccagataagccctgccttc
aagaagaacttcactgccctgcagaagaaaagggttcagcggcatccatttgagaggata
gccacacccttccaggtgtacagttggaccgccccccaggtggaccacaccatggactgt
gtcagagctgaggacgcttacacctcccgtctgggctacgaggaacacatacctggacag
acgcgagactggaatgaggagctgcagacgaccagagagctggcccggaagaacctgcct
gaacgcctgctgagagagagggccatcttcaaggtccacagtgactttgcggctgctgcc
actcgcggttccatggcggtgatcgacggcaacgtgatggccatcaaccctggcgaggag
acacgtatgcagatgtttatctggaacaacatcttcttctccctgggcttcgacgtccgt
gaccactaccgcgagctgggcggggacgctgccgcgcacgctgctcccaccaacgacctc
aacggtgtccgggcttacggggccgtagacgtggaggggctgtacaccctggggaccgtg
gtggtggactatcggggttaccgtgtcacggcccagtcgatcatccctggcattctggag
agagagcaggagcagagcgttatctacgggtctatcgactttgggaagacagtggtgtct
catgggaagtacctggagcttctggagaggaccagtcgaccactcaaggtccagagacac
aatgtgctgaatgagaaggatgagtccatggagctgtgttcctctgttgagtgtaagggc
ataatcggcaacgatggacgccactacatcctggaccttctgaggaccttcccccccgac
ctgaacttcctgcctgtggaaggggaggagctttcccctgagagtgtgagacagggtttc
ccacgccagcaccgccaccgcctggcctgcctccgacaggagctcatcgaggccttcgtt
gagcacagatacctcctcttcatgaagatggcagcgctccagctgatgcagcagaaagcc
aacaaggagagcaagctggccaccctgacagagaacagcagccccggggcagccgttcca
gccctgccctccacagagacccccgatggctcggccgagtcctcagaaacttccacagaa
accctcactgacgccaactcagacgcagcccagacagagtccacctctgatgcccctcag
gcagcagcaacagaaaccaccaccacagaagcagcccccaagacagagccaatgacagaa
acagacagttcagctacaacaaccactaatgcctcccaggcaacccctatagaggttaat
gtggttcccacggtgaccaccaatgggccgttggtgccctttgccacagcgattcagaac
ggggagtgcgagagccctctggagggtaaggctgaggatattatcccgggcttagcccag
gcgaaagagctggctgagtccttagacacggaagacggatccggtatcgaccctaaaagc
cgagaggtggtcctcaatgcctgcaaggctgtgggttccatcagcaacacctccttcgac
atccgcttcaacccagacatcttctctccaggagtgcgtttccctgaggacagtgcggat
gacattcagaaacagaagcagctgttgaaggatgctggagccttcctggtgtcctgtcag
atcccatctctggtgaaggactgtctggaccacagtgctctgcccatggatggagccacg
ctgaccgaggcgctgcaccagaggggcatcaacgtgcgttacctaggcaacgtgctggcg
tttgtggacaagaccccagccaaggcacagctggagcacttctatagaataggtatcagc
gagttaatcaccagatgtgcgaaacatatcttcaagacatacctccagggtgttgagttg
tcggccctctccgccgctgtcagccacttcctcaactgcttcctgtcctccttcgatgcc
gtggcacacctgcctgccgacgagctcgtgtcgcgccgcaagaaccgtaagcgccgtaac
cgcgtcccggggggaggggacaacactgcgtgggccagcctgacacccagcgagctgtgg
aagaacattgtctctgaggcccagagctactaccacttcaccctgcactgcgagaatgct
gaccaggtagtggagaaatacggccttcagaagatcaccctgctcagagaaatctccatc
aaagctggcatccagatcctgataaaggagtataactttgacagtcgccacaagcctgcc
ttcacagaggaggacatccttaacatcttccctgtggtgaagcacgtcaaccccaaggcc
tccgatgcctttcacttcttccagagtggacaggccaaggtccagcaaggttacctgaag
gagggctgtgagttgatcaacgaggctctgaacctgttcaacaacgtgtacggggccatg
cacgtagagatctgtgcctgcctgcgtctgctggctcgcctcaactacatcatgggagac
caccacgaggctctcagtaaccaacagaaggctgtcttgatgagtgagagagtactgggc
gtcgagcaccccaacacgatccaggaatatatgcacttggctctgtattgctttgccaac
ggtcagctgtccactgccctgaagctgctgtaccgtgctcgctacctcatgctgatggtg
tgtggggaggaccaccccgagatggcgcttctagacagtaacattggcctggtgctgcac
ggagtaatggagtacgacctgtctctgaggttcttggagaacgccttggccatcaactcc
aaataccatggaccccgctccctcaaagtagccctcagtcatcatctggttgcgagggtt
tacgagagcaaggcagagttccgctctgcgctccagcaggaaaaggagggctacactatc
tacaaaaaccaggtgggagaggcccacgagaagactaaagagagctcagagtacctgaag
tacctcacacagcaggctgtggctctgcagagaaccatgaacgagatctacaagaacggc
tccaacgccagcatcatgccactcaagttcacagcacccagtatggccagtgttctagag
cagctcaatatcatcaacggcatcatctttatacccctcagccaaaaggacttggagaac
ctgaaggcggaagtccagcggcggcagcagcttcaggagtcagggaagagcgtggaggat
ctcactgtgcatagtccactagagctggaggacaaaatacccatggacgttaacgttgat
taa
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