Salmo trutta (river trout): 115206340
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Entry
115206340 CDS
T08542
Name
(RefSeq) serine/arginine-rich splicing factor 1B
KO
K12890
serine/arginine-rich splicing factor 1
Organism
stru
Salmo trutta (river trout)
Pathway
stru03040
Spliceosome
stru05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115206340
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
115206340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
stru03041
]
115206340
Spliceosome [BR:
stru03041
]
Common components
Common spliceosomal components
SR proteins
115206340
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_3
RRM_7
Nup35_RRM_2
CoV_nucleocap
Motif
Other DBs
NCBI-GeneID:
115206340
NCBI-ProteinID:
XP_029629029
LinkDB
All DBs
Position
13:complement(65379902..65388647)
Genome browser
AA seq
256 aa
AA seq
DB search
MSGGVVRGPAGNNDCRIYVGNLPPDIRTKDVEDVFYKYGAIRDIDLKNRRGGPPFAFIEF
EDPRDADDAVYGRDGYDYDGYRLRVEFPRSGRGGGRGGFGGGGGGGGGVGGAPRGRYGPP
SRRSEYRVIVSGLPQSGSWQDLKDHMREAGDVCYADVFRDGTGVVEFVRKEDMTYAVRKL
DNTKFRSHEGETAYVRVKVDGPRSPSYGRSRSRSRSRSRSRSAASRSRSNSRGGGARGGR
GSPRYSPRHSRSRSRS
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggaggcgtcgtgcgaggcccagcaggaaataacgattgtcgaatttatgtcgga
aatctaccccctgatattcgcactaaagatgtcgaggacgtgttctacaaatacggagct
attcgagacatcgatttgaaaaatcggagagggggacctccctttgccttcatcgaattt
gaagatcccagggacgcagacgatgcagtgtacggacgagacggctatgactacgacggt
tatcggctgcgagttgaattccctcggagcggcaggggtggggggagaggcggctttggt
ggtggtggtggtggtggtgggggggttggtggcgcccctagaggcagatacgggccgcca
tccagacgctcagagtacagggtcattgtctcagggcttccccagagtggcagctggcag
gacctcaaggatcacatgcgtgaggctggggatgtatgttatgctgacgttttcagagat
ggaactggagttgtggagtttgtgcgcaaggaagacatgacctacgctgttcgaaagctg
gataacaccaaattccgatcacacgagggagagaccgcttacgttcgcgtgaaagtagat
ggtccccgcagcccgagctatggaagatcccgttccaggagccgcagtcgaagcaggagc
cgcagtgccgccagtcgcagccgcagcaactctcgtggtggtggtgcccgtggtggcaga
ggatctcctcgctactctcctcgccatagccgctctcgctcccgttcctaa
DBGET
integrated database retrieval system
