Salmo trutta (river trout): 115206366
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Entry
115206366 CDS
T08542
Name
(RefSeq) protein Smaug homolog 2-like isoform X1
KO
K27396
protein Smaug
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stru03019
]
115206366
Messenger RNA biogenesis [BR:
stru03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
115206366
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHAT
SAM_1
SAM_2
Motif
Other DBs
NCBI-GeneID:
115206366
NCBI-ProteinID:
XP_029629076
Ensembl:
ENSSTUG00000041317
LinkDB
All DBs
Position
13:66553323..66566642
Genome browser
AA seq
677 aa
AA seq
DB search
MMFRDQVGILTDWFKGWNECEQTVALLSLLKRASRTQARFLHICLEHWLADCTEIHILEA
EANNADIVSQWHQEPMEKAVSLLLSHLPLLQPRNSEAKCEYMKLLQKVLSHTIESSLFVE
ESRQLLSYALIHPATTLDDRTSLAMWLNHLEEHLSSGYPAPSSRPPYHPRQGSDEWPGSA
EGLDPGHGWLDKPPSSSSSPAGQNGHMSFQGGMPINSNNAGMGQMGQASPLKRSLSLIPS
SPQVCGADWLSQDDLGGRQAFDHAPLSPQSSVASSGSEQTEDQGSRNTFQEDGSGMKDVP
MWLKSLRLHKYAALFSQMTYEEMMILTEHHLESQVCHRLSQNVTKGARHKIALSVQKLRE
RPSVLKSLEKDILEGGNLRNALQELQLIIITPIKVYSYSPPSVSHRDMEGTGSPSDHSNP
GEDKDLAQEGFQPHNPPPCDGESSATPISDRDIAGQFTRVMGKVCTQLLVSRPDEENISC
YLQLIEKCLTHEAFTETQRKRLVSWKQQVLKLLRLFPRKAMLDMPVYRQKGWAYGSNSLP
TAGSVSAGGLARRGQRSFQMPPRGLTAGRMGLLSPGGIGVASPRHTLTSPTLPGQGRQNL
WFANPGGSNSMPSQSRSSVQRTHSLPVHTSPQTMLLFQQQECQVPGADLEINPTLESLCL
SMTEHALGDGMDRTSTI
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atgatgttccgagaccaggtgggcatcctgacggactggttcaagggctggaacgagtgt
gagcagacggtggcgcttctttccttgctgaagagagcgtctcgtacccaggcccgcttc
ctgcacatctgcctggagcactggctggcagactgcactgagatccacatcctggaggct
gaggccaacaatgcagacattgtgagccagtggcaccaggaacccatggagaaggcggtg
tccctgctgctgtcccacctacccctgctgcagccccgcaacagcgaggccaagtgtgag
tacatgaagctgctgcagaaggtgctgagccacaccatcgagagcagcctgtttgtggag
gagagcagacagctgctgtcctacgccctcatccacccggccaccaccctggatgaccgc
acctcgctggccatgtggctcaaccacctggaggagcacctctccagcggctacccagcg
ccctcctcccggcccccctaccacccccgtcagggctcagatgagtggccgggctccgcg
gagggactggaccctggccacggctggctggacaagcccccctcctccagctcctcccct
gcagggcagaatggacacatgtctttccagggcgggatgcccatcaacagcaacaacgca
ggcatggggcaaatgggccaggccagtcctctgaagaggtccttgtccctgatcccctcc
agtccccaggtctgtggcgcagattggctgagccaggatgacctgggggggcgacaggcc
tttgaccacgcgcccctgtccccccagagtagtgtggcatcctcaggcagcgagcagact
gaggaccagggctccagaaacaccttccaggaggacggcagtggcatgaaagatgtgccc
atgtggctgaagagcctccgtcttcataagtacgcagcacttttctcccagatgacttat
gaggagatgatgattctgacagagcaccacctggagtcacaggtttgtcatcgtttgtca
cagaatgtgaccaaaggtgcacggcacaagatagccctgagtgtccagaagctgcgagag
aggccaagcgttctcaagtctttagagaaggatatattggaggggggcaacctgcgtaac
gccctacaggaactacagctgatcatcatcacccccatcaaggtctacagctacagccct
cccagtgtttcccacagagatatggaggggactggatccccctcagaccactccaaccct
ggggaggacaaggacctggcccaggagggtttccagccccacaacccccctccctgcgac
ggggagtcctcagccacacccatctcagaccgcgacattgctggccagttcacgcgtgtc
atgggtaaagtgtgcactcagctactggtgtccagaccggacgaggagaatatcagctgt
tacctgcagctcattgagaaatgtctgacacatgaggctttcacagagactcagaggaag
agactggtctcctggaagcagcaggttctcaaactgctccgcctgttcccaaggaaagcc
atgctggacatgcctgtgtaccgacagaaaggctgggcatatggttccaactccctcccc
acagcaggctctgtgagtgctgggggtctggcacgtagggggcagaggtcattccagatg
ccccctcgtggcctcactgccgggcgcatggggctcctgagtccaggtggtatcggggtt
gcctccccacgccacaccctcaccagccccacactgccaggccagggcagacagaacctg
tggtttgccaaccctgggggcagcaacagcatgccaagccagagtcgcagctccgtgcaa
cggacccactcactccctgtccacacctccccgcaaaccatgctcctgttccagcagcaa
gaatgccaagttccaggtgcagacctggagatcaaccccaccctggagtcactgtgcctc
agtatgacagagcatgccttaggggatggaatggaccgaacatcaacaatatga
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