Salmo trutta (river trout): 115206394
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Entry
115206394 CDS
T08542
Name
(RefSeq) CD166 antigen homolog A-like isoform X1
KO
K06547
activated leukocyte cell adhesion molecule
Organism
stru
Salmo trutta (river trout)
Pathway
stru04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
115206394
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
stru04515
]
115206394
04090 CD molecules [BR:
stru04090
]
115206394
Cell adhesion molecules [BR:
stru04515
]
Immunoglobulin superfamily
ALCAM
115206394
CD molecules [BR:
stru04090
]
Proteins
115206394
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
Ig_2
ig
I-set
C2-set_2
V-set
Syndecan
DUF6773
DUF6377
Podoplanin
Motif
Other DBs
NCBI-GeneID:
115206394
NCBI-ProteinID:
XP_029629165
Ensembl:
ENSSTUG00000047456
LinkDB
All DBs
Position
13:67829723..67892038
Genome browser
AA seq
560 aa
AA seq
DB search
MHFSSCLCALLVALVYQVSGMDTVIGLYGETIEVPCNNGAPKPKDLFMTKWKYDDGDLLT
QLKDQDASVIATDKYKDRVSMAENSSLLIAAATLKDEKTFTCMVVAGADISEYPVKLLIH
KAPTGVEITALATELEIGKPTQLGQCRTSDANPAASITWFKNKKPLVADGKGIIISSNVK
VDEATGLTTTSSTLQYTAEKGDTAALFTCGALNTLSSPVSFTVTYPTERISLHVISKGPL
MEGANMTLKCKADGNPPPTSFNFHILGKVVKVENSDSYTVTDVTRESTGEYKCSIIDNAK
MEDSKNITINYLDMSLSPSGKVMKSFGEGLALTLQTHASGELKVSWTKDNGKLDSSPKFD
KLTYSDSGKYEVVVTMGALIKKDSFELVVEGVPVIRRVAKRRSEDGQHKVLTCEAEGSPK
PTVAWSVNGTSADESPYVNGKITHKLTIVPTVNLTVVCTVSNEHGQDTRTINVSTLFEEV
RMDKQDSSDEGDTTKLVVGVIVGLLLATVVVGLAYWLYMKKSKQGSWKTGEKEDGSTEES
KKLEEKIEEKLEENSQKVEV
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgcatttttccagctgtctgtgtgccctcctcgtcgcgcttgtctaccaagtgagcggt
atggatacagttatcggcctgtatggagagaccattgaggtgccatgcaacaatggagcg
cccaaaccaaaggacctgttcatgaccaaatggaaatacgacgatggagacctgctgacc
cagcttaaagaccaggacgcctctgtcatagccactgacaagtacaaggaccgtgtcagc
atggccgaaaactccagcctgctgattgctgcagcaacactgaaggacgagaagactttt
acttgcatggtggtggctggggctgacatctcagaatacccagtcaaactccttatccac
aaggctccaaccggagtggagatcacagccctagccacagagctggagattggcaaaccg
acccagctagggcaatgcagaacctctgatgccaacccagctgccagcatcacatggttc
aagaacaagaaacctctggtggctgatgggaaaggcattataatcagttccaacgtaaag
gtggacgaagccactggcctcaccaccacctcctccactctgcagtacacagctgagaag
ggagacacagcagctctgttcacctgtggggctttgaataccttgtcctctccagtctcc
ttcactgtcacctaccccacagagaggatcagtctgcatgtcatttcgaaagggccccta
atggaaggagccaatatgactctgaagtgcaaggccgacgggaacccacctcccaccagc
ttcaacttccacattctgggaaaggtggtgaaggtggagaactctgactcctacactgtg
actgatgtcacacgtgaaagcacaggggaatacaagtgttctatcattgacaatgccaag
atggaagactccaagaacattaccatcaattacttagatatgagtttgagcccctcaggg
aaggttatgaagagctttggcgaaggcttggctctgaccctgcagacccatgcatctgga
gaacttaaggtgtcttggactaaggacaatggcaagctggacagtagtcccaaatttgac
aagctgacctactctgattctggaaagtatgaggttgtggtcaccatgggtgctctcatc
aagaaagattcttttgagctggtcgttgaaggtgttccagtcattcggcgggtggccaag
cggcgcagcgaggacggccagcacaaggtacttacctgcgaggctgagggctcccccaaa
cccactgtggcctggagcgtcaacggcacctcggctgatgaaagtccctatgtcaatgga
aagatcacacacaagctgaccattgtgcctacagtcaacctgaccgttgtctgcactgtg
tccaatgagcatggccaggacaccaggactattaacgtgtcgaccttatttgaggaggtg
agaatggataaacaagactcatcagatgagggtgacacgacaaagttggtggtgggagtt
attgtgggtctgctcctggccactgtagttgtgggtctagcatactggctgtacatgaag
aaatccaagcaaggcagctggaagaccggtgagaaggaggatggatccactgaggagagc
aagaaactggaggagaaaatagaagagaagctggaggagaacagccagaaagttgaggtg
taa
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